RNA–Protein interactions for RNA: ENST00000598478.1

LINC00343-206, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 618 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-206ENST00000598478 RNFT1Q5M7Z0 435 aa10.68□□□□□ -0.7
LINC00343-206ENST00000598478 VWA5B2Q8N398 1253 aa10.68□□□□□ -0.7
LINC00343-206ENST00000598478 SLC4A9Q96Q91 983 aa10.68□□□□□ -0.7
LINC00343-206ENST00000598478 ATG3Q9NT62 314 aa10.68□□□□□ -0.7
LINC00343-206ENST00000598478 TMOD3Q9NYL9 352 aa10.68□□□□□ -0.7
LINC00343-206ENST00000598478 SRP68Q9UHB9 627 aaKnown RBP10.68□□□□□ -0.7
LINC00343-206ENST00000598478 PASKQ96RG2 1323 aa10.67□□□□□ -0.7
LINC00343-206ENST00000598478 MYH14Q7Z406 1995 aaKnown RBP10.67□□□□□ -0.7
LINC00343-206ENST00000598478 ESPNB1AK53 854 aa10.67□□□□□ -0.7
LINC00343-206ENST00000598478 ADD1P35611 737 aaKnown RBP10.67□□□□□ -0.7
LINC00343-206ENST00000598478 KCNMA1Q12791 1236 aa10.67□□□□□ -0.7
LINC00343-206ENST00000598478 COG3Q96JB2 828 aa10.67□□□□□ -0.7
LINC00343-206ENST00000598478 COL5A3P25940 1745 aaPredicted RBP10.67□□□□□ -0.7
LINC00343-206ENST00000598478 CDC14CA4D256 554 aa10.66□□□□□ -0.7
LINC00343-206ENST00000598478 NFKBIEO00221 500 aa10.66□□□□□ -0.7
LINC00343-206ENST00000598478 SV2AQ7L0J3 742 aa10.66□□□□□ -0.7
LINC00343-206ENST00000598478 KDRP35968 1356 aa10.65□□□□□ -0.7
LINC00343-206ENST00000598478 TMEM88BA6NKF7 163 aa10.65□□□□□ -0.7
LINC00343-206ENST00000598478 RPS6KA4O75676 772 aa10.65□□□□□ -0.7
LINC00343-206ENST00000598478 PTGIRP43119 386 aa10.65□□□□□ -0.7
LINC00343-206ENST00000598478 GSK3AP49840 483 aa10.65□□□□□ -0.7
LINC00343-206ENST00000598478 HSP90AB2PQ58FF8 381 aa10.65□□□□□ -0.7
LINC00343-206ENST00000598478 FOXD4L5Q5VV16 416 aaPredicted RBP10.65□□□□□ -0.7
LINC00343-206ENST00000598478 KDF1Q8NAX2 398 aaPredicted RBP10.65□□□□□ -0.7
LINC00343-206ENST00000598478 TRIM34Q9BYJ4 488 aa10.65□□□□□ -0.7
LINC00343-206ENST00000598478 TERF2IPQ9NYB0 399 aa10.65□□□□□ -0.7
LINC00343-206ENST00000598478 SMG6Q86US8 1419 aaKnown RBP10.65□□□□□ -0.7
LINC00343-206ENST00000598478 RTL1A6NKG5 1358 aa10.65□□□□□ -0.71
LINC00343-206ENST00000598478 POLRMTO00411 1230 aaKnown RBP10.64□□□□□ -0.71
LINC00343-206ENST00000598478 ADAMTS8Q9UP79 889 aa10.64□□□□□ -0.71
LINC00343-206ENST00000598478 DLEC1Q9Y238 1755 aa10.63□□□□□ -0.71
LINC00343-206ENST00000598478 DICER1Q9UPY3 1922 aaKnown RBP10.63□□□□□ -0.71
LINC00343-206ENST00000598478 DDNO94850 711 aaPredicted RBP10.63□□□□□ -0.71
LINC00343-206ENST00000598478 ZNF385CQ66K41 422 aaPredicted RBP10.63□□□□□ -0.71
LINC00343-206ENST00000598478 ROCK2O75116 1388 aaKnown RBP10.63□□□□□ -0.71
LINC00343-206ENST00000598478 AFDNP55196 1824 aaKnown RBP10.63□□□□□ -0.71
LINC00343-206ENST00000598478 CNTNAP4Q9C0A0 1308 aa10.62□□□□□ -0.71
LINC00343-206ENST00000598478 WDR33Q9C0J8 1336 aaKnown RBP10.62□□□□□ -0.71
LINC00343-206ENST00000598478 MAP2K1Q02750 393 aaPredicted RBP10.62□□□□□ -0.71
LINC00343-206ENST00000598478 DEFB115Q30KQ5 88 aa10.62□□□□□ -0.71
LINC00343-206ENST00000598478 CYLDQ9NQC7 956 aa10.62□□□□□ -0.71
LINC00343-206ENST00000598478 USP42Q9H9J4 1324 aaKnown RBP10.61□□□□□ -0.71
LINC00343-206ENST00000598478 ZNF831Q5JPB2 1677 aa10.61□□□□□ -0.71
LINC00343-206ENST00000598478 RASSF10A6NK89 507 aa10.61□□□□□ -0.71
LINC00343-206ENST00000598478 SLURP2P0DP57 97 aa10.61□□□□□ -0.71
LINC00343-206ENST00000598478 TM4SF1P30408 202 aa10.61□□□□□ -0.71
LINC00343-206ENST00000598478 TMEM259Q4ZIN3 620 aa10.61□□□□□ -0.71
LINC00343-206ENST00000598478 SVOPQ8N4V2 548 aa10.61□□□□□ -0.71
LINC00343-206ENST00000598478 TTLL6Q8N841 843 aa10.61□□□□□ -0.71
LINC00343-206ENST00000598478 L3MBTL2Q969R5 705 aa10.61□□□□□ -0.71
LINC00343-206ENST00000598478 PCMTD1Q96MG8 357 aaPredicted RBP10.61□□□□□ -0.71
LINC00343-206ENST00000598478 SPG7Q9UQ90 795 aa10.61□□□□□ -0.71
LINC00343-206ENST00000598478 INSRP06213 1382 aa10.61□□□□□ -0.71
LINC00343-206ENST00000598478 LYSMD3Q7Z3D4 306 aa10.6□□□□□ -0.71
LINC00343-206ENST00000598478 LDHDQ86WU2 507 aa10.6□□□□□ -0.71
LINC00343-206ENST00000598478 KCTD17Q8N5Z5 321 aa10.6□□□□□ -0.71
LINC00343-206ENST00000598478 WHAMMQ8TF30 809 aa10.6□□□□□ -0.71
LINC00343-206ENST00000598478 MCOLN1Q9GZU1 580 aa10.6□□□□□ -0.71
LINC00343-206ENST00000598478 GOPCQ9HD26 462 aa10.6□□□□□ -0.71
LINC00343-206ENST00000598478 PHKG2P15735 406 aa10.59□□□□□ -0.71
LINC00343-206ENST00000598478 CRKLP46109 303 aaKnown RBP10.59□□□□□ -0.71
LINC00343-206ENST00000598478 EAPPQ56P03 285 aaPredicted RBP10.59□□□□□ -0.71
LINC00343-206ENST00000598478 TMEM151AQ8N4L1 468 aa10.59□□□□□ -0.71
LINC00343-206ENST00000598478 GGNBP2Q9H3C7 697 aa10.59□□□□□ -0.71
LINC00343-206ENST00000598478 TAF1DQ9H5J8 278 aaPredicted RBP10.59□□□□□ -0.71
LINC00343-206ENST00000598478 PCDHB9Q9Y5E1 797 aa10.59□□□□□ -0.71
LINC00343-206ENST00000598478 ADAMTS7Q9UKP4 1686 aa10.59□□□□□ -0.71
LINC00343-206ENST00000598478 FER1L6Q2WGJ9 1857 aa10.59□□□□□ -0.71
LINC00343-206ENST00000598478 CASP8AP2Q9UKL3 1982 aa10.59□□□□□ -0.71
LINC00343-206ENST00000598478 ZBBXA8MT70 800 aa10.58□□□□□ -0.72
LINC00343-206ENST00000598478 RNF225M0QZC1 329 aaPredicted RBP10.58□□□□□ -0.72
LINC00343-206ENST00000598478 C21orf2O43822 256 aa10.58□□□□□ -0.72
LINC00343-206ENST00000598478 GRM1Q13255 1194 aa10.58□□□□□ -0.72
LINC00343-206ENST00000598478 C2CD5Q86YS7 1000 aa10.58□□□□□ -0.72
LINC00343-206ENST00000598478 ABT1Q9ULW3 272 aaKnown RBP10.58□□□□□ -0.72
LINC00343-206ENST00000598478 CARMIL3Q8ND23 1372 aa10.57□□□□□ -0.72
LINC00343-206ENST00000598478 SCN4AP35499 1836 aa10.57□□□□□ -0.72
LINC00343-206ENST00000598478 PTCD1O75127 700 aaKnown RBP10.57□□□□□ -0.72
LINC00343-206ENST00000598478 USPL1Q5W0Q7 1092 aa10.57□□□□□ -0.72
LINC00343-206ENST00000598478 IFNL2Q8IZJ0 200 aa10.57□□□□□ -0.72
LINC00343-206ENST00000598478 CUEDC1Q9NWM3 386 aaPredicted RBP10.57□□□□□ -0.72
LINC00343-206ENST00000598478 LTBP1Q14766 1721 aa10.57□□□□□ -0.72
LINC00343-206ENST00000598478 NRXN2Q9P2S2 1712 aa10.57□□□□□ -0.72
LINC00343-206ENST00000598478 THSD7BQ9C0I4 1608 aa10.57□□□□□ -0.72
LINC00343-206ENST00000598478 FLT4P35916 1363 aa10.56□□□□□ -0.72
LINC00343-206ENST00000598478 H0YIN7 160 aa10.56□□□□□ -0.72
LINC00343-206ENST00000598478 FYB1O15117 783 aa10.56□□□□□ -0.72
LINC00343-206ENST00000598478 GDF11O95390 407 aa10.56□□□□□ -0.72
LINC00343-206ENST00000598478 FBXO45P0C2W1 286 aa10.56□□□□□ -0.72
LINC00343-206ENST00000598478 RNF144AP50876 292 aaPredicted RBP10.56□□□□□ -0.72
LINC00343-206ENST00000598478 NFIXQ14938 502 aa10.56□□□□□ -0.72
LINC00343-206ENST00000598478 MAP1SQ66K74 1059 aaPredicted RBP10.56□□□□□ -0.72
LINC00343-206ENST00000598478 PRICKLE2Q7Z3G6 844 aa10.56□□□□□ -0.72
LINC00343-206ENST00000598478 ADAMTSL1Q8N6G6 1762 aa10.56□□□□□ -0.72
LINC00343-206ENST00000598478 NCAPD2Q15021 1401 aa10.56□□□□□ -0.72
LINC00343-206ENST00000598478 TJP1Q07157 1748 aa10.55□□□□□ -0.72
LINC00343-206ENST00000598478 IQCA1LA6NCM1 817 aa10.55□□□□□ -0.72
LINC00343-206ENST00000598478 ARHGEF15O94989 841 aa10.55□□□□□ -0.72
LINC00343-206ENST00000598478 RHOQP17081 205 aa10.55□□□□□ -0.72
LINC00343-206ENST00000598478 FMR1Q06787 632 aaKnown RBP eCLIP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms