RNA–Protein interactions for RNA: ENST00000598364.1

SYMPK-211, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-211ENST00000598364 DDX58O95786 925 aaKnown RBP18.89■□□□□ 0.61
SYMPK-211ENST00000598364 OTUD7BQ6GQQ9 843 aa18.89■□□□□ 0.61
SYMPK-211ENST00000598364 KSR2Q6VAB6 950 aa18.89■□□□□ 0.61
SYMPK-211ENST00000598364 MS4A4AQ96JQ5 239 aa18.89■□□□□ 0.61
SYMPK-211ENST00000598364 TMEM106CQ9BVX2 250 aa18.89■□□□□ 0.61
SYMPK-211ENST00000598364 IFT57Q9NWB7 429 aa18.89■□□□□ 0.61
SYMPK-211ENST00000598364 ADAMTS8Q9UP79 889 aa18.89■□□□□ 0.61
SYMPK-211ENST00000598364 PI4KAP2A4QPH2 592 aa18.88■□□□□ 0.61
SYMPK-211ENST00000598364 SPDYE2BA6NHP3 402 aa18.88■□□□□ 0.61
SYMPK-211ENST00000598364 H7C1W4 665 aa18.88■□□□□ 0.61
SYMPK-211ENST00000598364 SPDYE6P0CI01 402 aa18.88■□□□□ 0.61
SYMPK-211ENST00000598364 IGHMBP2P38935 993 aaKnown RBP18.88■□□□□ 0.61
SYMPK-211ENST00000598364 CWF19L2Q2TBE0 894 aaKnown RBP18.88■□□□□ 0.61
SYMPK-211ENST00000598364 SUPT20HL1Q3ZLR7 823 aa18.88■□□□□ 0.61
SYMPK-211ENST00000598364 CFAP100Q494V2 611 aa18.88■□□□□ 0.61
SYMPK-211ENST00000598364 PI4KAP1Q8N8J0 262 aa18.88■□□□□ 0.61
SYMPK-211ENST00000598364 ANKRD2Q9GZV1 360 aa18.88■□□□□ 0.61
SYMPK-211ENST00000598364 PTCH2Q9Y6C5 1203 aa18.88■□□□□ 0.61
SYMPK-211ENST00000598364 MYH3P11055 1940 aa18.88■□□□□ 0.61
SYMPK-211ENST00000598364 NEURL1BA8MQ27 555 aa18.87■□□□□ 0.61
SYMPK-211ENST00000598364 H0YGN5 161 aa18.87■□□□□ 0.61
SYMPK-211ENST00000598364 ITGA6P23229 1130 aa18.87■□□□□ 0.61
SYMPK-211ENST00000598364 IREB2P48200 963 aaKnown RBP18.87■□□□□ 0.61
SYMPK-211ENST00000598364 ANKRD13AQ8IZ07 590 aa18.87■□□□□ 0.61
SYMPK-211ENST00000598364 TRIOBPQ9H2D6 2365 aa18.86■□□□□ 0.61
SYMPK-211ENST00000598364 F8W031 263 aaPredicted RBP18.86■□□□□ 0.61
SYMPK-211ENST00000598364 CHRNDQ07001 517 aa18.86■□□□□ 0.61
SYMPK-211ENST00000598364 RASA3Q14644 834 aa18.86■□□□□ 0.61
SYMPK-211ENST00000598364 BRI3BPQ8WY22 251 aa18.86■□□□□ 0.61
SYMPK-211ENST00000598364 OPTNQ96CV9 577 aa18.86■□□□□ 0.61
SYMPK-211ENST00000598364 PLA2G12BQ9BX93 195 aa18.86■□□□□ 0.61
SYMPK-211ENST00000598364 ECM29Q5VYK3 1845 aa18.86■□□□□ 0.61
SYMPK-211ENST00000598364 CEP290O15078 2479 aa18.85■□□□□ 0.61
SYMPK-211ENST00000598364 CSF1RP07333 972 aa18.85■□□□□ 0.61
SYMPK-211ENST00000598364 CASP7P55210 303 aa18.85■□□□□ 0.61
SYMPK-211ENST00000598364 SLC9C1Q4G0N8 1177 aa18.85■□□□□ 0.61
SYMPK-211ENST00000598364 CCDC30Q5VVM6 783 aa18.85■□□□□ 0.61
SYMPK-211ENST00000598364 C15orf52Q6ZUT6 534 aaKnown RBP18.85■□□□□ 0.61
SYMPK-211ENST00000598364 UBE3BQ7Z3V4 1068 aa18.85■□□□□ 0.61
SYMPK-211ENST00000598364 TSPYL6Q8N831 410 aa18.85■□□□□ 0.61
SYMPK-211ENST00000598364 CNKSR2Q8WXI2 1034 aa18.85■□□□□ 0.61
SYMPK-211ENST00000598364 ELP3Q9H9T3 547 aa18.85■□□□□ 0.61
SYMPK-211ENST00000598364 VEZTQ9HBM0 779 aa18.85■□□□□ 0.61
SYMPK-211ENST00000598364 MYBBP1AQ9BQG0 1328 aaKnown RBP18.84■□□□□ 0.61
SYMPK-211ENST00000598364 IL1R1P14778 569 aa18.84■□□□□ 0.61
SYMPK-211ENST00000598364 GNAI1P63096 354 aa18.84■□□□□ 0.61
SYMPK-211ENST00000598364 NBPF11Q86T75 865 aa18.84■□□□□ 0.61
SYMPK-211ENST00000598364 OTOFQ9HC10 1997 aa18.83■□□□□ 0.61
SYMPK-211ENST00000598364 TAF5LO75529 589 aa18.83■□□□□ 0.6
SYMPK-211ENST00000598364 FKBP1AP62942 108 aaKnown RBP18.83■□□□□ 0.6
SYMPK-211ENST00000598364 WDR43Q15061 677 aaKnown RBP eCLIP18.83■□□□□ 0.6
SYMPK-211ENST00000598364 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.83■□□□□ 0.6
SYMPK-211ENST00000598364 CDAN1Q8IWY9 1227 aa18.83■□□□□ 0.6
SYMPK-211ENST00000598364 MPHOSPH8Q99549 860 aa18.83■□□□□ 0.6
SYMPK-211ENST00000598364 MYO1BO43795 1136 aa18.82■□□□□ 0.6
SYMPK-211ENST00000598364 KCNJ4P48050 445 aa18.82■□□□□ 0.6
SYMPK-211ENST00000598364 SLC4A8Q2Y0W8 1093 aa18.82■□□□□ 0.6
SYMPK-211ENST00000598364 FAM43AQ8N2R8 423 aa18.82■□□□□ 0.6
SYMPK-211ENST00000598364 SH3TC2Q8TF17 1288 aa18.82■□□□□ 0.6
SYMPK-211ENST00000598364 TEPSINQ96N21 525 aa18.82■□□□□ 0.6
SYMPK-211ENST00000598364 JAG2Q9Y219 1238 aa18.82■□□□□ 0.6
SYMPK-211ENST00000598364 LAMA3Q16787 3333 aa18.81■□□□□ 0.6
SYMPK-211ENST00000598364 MYCP01106 439 aaPredicted RBP18.81■□□□□ 0.6
SYMPK-211ENST00000598364 NEXNQ0ZGT2 675 aa18.81■□□□□ 0.6
SYMPK-211ENST00000598364 TAF1CQ15572 869 aaPredicted RBP18.81■□□□□ 0.6
SYMPK-211ENST00000598364 G2E3Q7L622 706 aa18.81■□□□□ 0.6
SYMPK-211ENST00000598364 HELBQ8NG08 1087 aaPredicted RBP18.81■□□□□ 0.6
SYMPK-211ENST00000598364 ARHGAP39Q9C0H5 1083 aa18.81■□□□□ 0.6
SYMPK-211ENST00000598364 ZFYVE28Q9HCC9 887 aa18.81■□□□□ 0.6
SYMPK-211ENST00000598364 COL6A3P12111 3177 aa18.81■□□□□ 0.6
SYMPK-211ENST00000598364 CCL15-CCL14A0A0B4J2E2 113 aa18.8■□□□□ 0.6
SYMPK-211ENST00000598364 APAF1O14727 1248 aa18.8■□□□□ 0.6
SYMPK-211ENST00000598364 GCKRQ14397 625 aa18.8■□□□□ 0.6
SYMPK-211ENST00000598364 CCL15Q16663 113 aa18.8■□□□□ 0.6
SYMPK-211ENST00000598364 SPDYE2Q495Y8 402 aa18.8■□□□□ 0.6
SYMPK-211ENST00000598364 CHRDL2Q6WN34 429 aa18.8■□□□□ 0.6
SYMPK-211ENST00000598364 RBM27Q9P2N5 1060 aaKnown RBP18.8■□□□□ 0.6
SYMPK-211ENST00000598364 VGLL4Q14135 290 aa18.79■□□□□ 0.6
SYMPK-211ENST00000598364 ARHGEF6Q15052 776 aa18.79■□□□□ 0.6
SYMPK-211ENST00000598364 SHISA4Q96DD7 197 aa18.79■□□□□ 0.6
SYMPK-211ENST00000598364 ZNF70Q9UC06 446 aaPredicted RBP18.79■□□□□ 0.6
SYMPK-211ENST00000598364 ZSWIM8A7E2V4 1837 aa18.79■□□□□ 0.6
SYMPK-211ENST00000598364 GTF2A2P52657 109 aa18.78■□□□□ 0.6
SYMPK-211ENST00000598364 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.78■□□□□ 0.66e-7■■■■■ 29.6
SYMPK-211ENST00000598364 RBM5P52756 815 aaKnown RBP eCLIP18.77■□□□□ 0.6
SYMPK-211ENST00000598364 MAP3K9P80192 1104 aa18.77■□□□□ 0.6
SYMPK-211ENST00000598364 CALD1Q05682 793 aaKnown RBP18.77■□□□□ 0.6
SYMPK-211ENST00000598364 CHMP4AQ9BY43 222 aa18.77■□□□□ 0.6
SYMPK-211ENST00000598364 PRO3102Q9H379 93 aa18.77■□□□□ 0.6
SYMPK-211ENST00000598364 TDRD3Q9H7E2 651 aaKnown RBP18.77■□□□□ 0.6
SYMPK-211ENST00000598364 A0A1B0GUL6 1792 aa18.77■□□□□ 0.6
SYMPK-211ENST00000598364 FAM205AQ6ZU69 1335 aa18.76■□□□□ 0.59
SYMPK-211ENST00000598364 A0A0C4DFX4 3053 aa18.76■□□□□ 0.59
SYMPK-211ENST00000598364 ANKRD18BA2A2Z9 1011 aa18.76■□□□□ 0.59
SYMPK-211ENST00000598364 TLR2O60603 784 aa18.76■□□□□ 0.59
SYMPK-211ENST00000598364 LACTBP83111 547 aaPredicted RBP18.76■□□□□ 0.59
SYMPK-211ENST00000598364 MTFR1Q15390 333 aa18.76■□□□□ 0.59
SYMPK-211ENST00000598364 ZNF804AQ7Z570 1209 aa18.76■□□□□ 0.59
SYMPK-211ENST00000598364 TMEM39BQ9GZU3 492 aa18.76■□□□□ 0.59
SYMPK-211ENST00000598364 CTGFP29279 349 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms