RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 CNKSR2Q8WXI2 1034 aa17.78■□□□□ 0.44
SHKBP1-208ENST00000595726 MS4A4AQ96JQ5 239 aa17.78■□□□□ 0.44
SHKBP1-208ENST00000595726 ELP3Q9H9T3 547 aa17.78■□□□□ 0.44
SHKBP1-208ENST00000595726 F8W031 263 aaPredicted RBP17.77■□□□□ 0.44
SHKBP1-208ENST00000595726 DPF3Q92784 378 aa17.77■□□□□ 0.44
SHKBP1-208ENST00000595726 OPTNQ96CV9 577 aa17.77■□□□□ 0.44
SHKBP1-208ENST00000595726 PRMT6Q96LA8 375 aaPredicted RBP17.77■□□□□ 0.44
SHKBP1-208ENST00000595726 VEZTQ9HBM0 779 aa17.77■□□□□ 0.44
SHKBP1-208ENST00000595726 LEMD3Q9Y2U8 911 aa17.77■□□□□ 0.44
SHKBP1-208ENST00000595726 ZNF804BA4D1E1 1349 aa17.76■□□□□ 0.43
SHKBP1-208ENST00000595726 SNAP23O00161 211 aa17.76■□□□□ 0.43
SHKBP1-208ENST00000595726 ECM2O94769 699 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-208ENST00000595726 ZEB1P37275 1124 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-208ENST00000595726 IREB2P48200 963 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-208ENST00000595726 ANKRD13AQ8IZ07 590 aa17.76■□□□□ 0.43
SHKBP1-208ENST00000595726 BRI3BPQ8WY22 251 aa17.76■□□□□ 0.43
SHKBP1-208ENST00000595726 METTL22Q9BUU2 404 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-208ENST00000595726 ARHGAP39Q9C0H5 1083 aa17.76■□□□□ 0.43
SHKBP1-208ENST00000595726 COL1A1P02452 1464 aaPredicted RBP17.75■□□□□ 0.43
SHKBP1-208ENST00000595726 UNCXA6NJT0 531 aa17.75■□□□□ 0.43
SHKBP1-208ENST00000595726 DDX10Q13206 875 aaKnown RBP17.75■□□□□ 0.43
SHKBP1-208ENST00000595726 RASA3Q14644 834 aa17.75■□□□□ 0.43
SHKBP1-208ENST00000595726 TAF1CQ15572 869 aaPredicted RBP17.75■□□□□ 0.43
SHKBP1-208ENST00000595726 CFAP100Q494V2 611 aa17.75■□□□□ 0.43
SHKBP1-208ENST00000595726 CD209Q9NNX6 404 aa17.75■□□□□ 0.43
SHKBP1-208ENST00000595726 PPP2R3BQ9Y5P8 575 aa17.75■□□□□ 0.43
SHKBP1-208ENST00000595726 FAM43AQ8N2R8 423 aa17.74■□□□□ 0.43
SHKBP1-208ENST00000595726 MTMR14Q8NCE2 650 aa17.74■□□□□ 0.43
SHKBP1-208ENST00000595726 ZFYVE28Q9HCC9 887 aa17.74■□□□□ 0.43
SHKBP1-208ENST00000595726 MBIPQ9NS73 344 aa17.74■□□□□ 0.43
SHKBP1-208ENST00000595726 JAG2Q9Y219 1238 aa17.74■□□□□ 0.43
SHKBP1-208ENST00000595726 CCL15-CCL14A0A0B4J2E2 113 aa17.73■□□□□ 0.43
SHKBP1-208ENST00000595726 SPDYE2BA6NHP3 402 aa17.73■□□□□ 0.43
SHKBP1-208ENST00000595726 IGKV5-2P06315 115 aa17.73■□□□□ 0.43
SHKBP1-208ENST00000595726 SPDYE6P0CI01 402 aa17.73■□□□□ 0.43
SHKBP1-208ENST00000595726 ARHGEF6Q15052 776 aa17.73■□□□□ 0.43
SHKBP1-208ENST00000595726 MTFR1Q15390 333 aa17.73■□□□□ 0.43
SHKBP1-208ENST00000595726 CCL15Q16663 113 aa17.73■□□□□ 0.43
SHKBP1-208ENST00000595726 CDAN1Q8IWY9 1227 aa17.73■□□□□ 0.43
SHKBP1-208ENST00000595726 SHISA4Q96DD7 197 aa17.73■□□□□ 0.43
SHKBP1-208ENST00000595726 MAP3K2Q9Y2U5 619 aa17.73■□□□□ 0.43
SHKBP1-208ENST00000595726 SPEF2Q9C093 1822 aa17.72■□□□□ 0.43
SHKBP1-208ENST00000595726 MYO1BO43795 1136 aa17.72■□□□□ 0.43
SHKBP1-208ENST00000595726 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-208ENST00000595726 LAMB1P07942 1786 aa17.71■□□□□ 0.43
SHKBP1-208ENST00000595726 IGHMBP2P38935 993 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-208ENST00000595726 RBM5P52756 815 aaKnown RBP eCLIP17.71■□□□□ 0.43
SHKBP1-208ENST00000595726 ANKRD2Q9GZV1 360 aa17.71■□□□□ 0.43
SHKBP1-208ENST00000595726 PRO3102Q9H379 93 aa17.71■□□□□ 0.43
SHKBP1-208ENST00000595726 UNC80Q8N2C7 3258 aa17.71■□□□□ 0.42
SHKBP1-208ENST00000595726 KCNJ4P48050 445 aa17.7■□□□□ 0.42
SHKBP1-208ENST00000595726 CWF19L2Q2TBE0 894 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-208ENST00000595726 HELBQ8NG08 1087 aaPredicted RBP17.7■□□□□ 0.42
SHKBP1-208ENST00000595726 ZSWIM8A7E2V4 1837 aa17.7■□□□□ 0.42
SHKBP1-208ENST00000595726 TAF5LO75529 589 aa17.69■□□□□ 0.42
SHKBP1-208ENST00000595726 ITGA6P23229 1130 aa17.69■□□□□ 0.42
SHKBP1-208ENST00000595726 CHRNDQ07001 517 aa17.69■□□□□ 0.42
SHKBP1-208ENST00000595726 RALBP1Q15311 655 aa17.69■□□□□ 0.42
SHKBP1-208ENST00000595726 PI4KAP2A4QPH2 592 aa17.68■□□□□ 0.42
SHKBP1-208ENST00000595726 SOX1O00570 391 aaPredicted RBP17.68■□□□□ 0.42
SHKBP1-208ENST00000595726 DDX58O95786 925 aaKnown RBP17.68■□□□□ 0.42
SHKBP1-208ENST00000595726 GTF2A2P52657 109 aa17.68■□□□□ 0.42
SHKBP1-208ENST00000595726 LACTBP83111 547 aaPredicted RBP17.68■□□□□ 0.42
SHKBP1-208ENST00000595726 VGLL4Q14135 290 aa17.68■□□□□ 0.42
SHKBP1-208ENST00000595726 UBE3BQ7Z3V4 1068 aa17.68■□□□□ 0.42
SHKBP1-208ENST00000595726 PI4KAP1Q8N8J0 262 aa17.68■□□□□ 0.42
SHKBP1-208ENST00000595726 C8orf58Q8NAV2 365 aa17.68■□□□□ 0.42
SHKBP1-208ENST00000595726 RUNDC1Q96C34 613 aa17.68■□□□□ 0.42
SHKBP1-208ENST00000595726 MPHOSPH8Q99549 860 aa17.68■□□□□ 0.42
SHKBP1-208ENST00000595726 IRS2Q9Y4H2 1338 aa17.68■□□□□ 0.42
SHKBP1-208ENST00000595726 CTGFP29279 349 aa17.67■□□□□ 0.42
SHKBP1-208ENST00000595726 LRCH3Q96II8 777 aa17.67■□□□□ 0.42
SHKBP1-208ENST00000595726 TEPSINQ96N21 525 aa17.67■□□□□ 0.42
SHKBP1-208ENST00000595726 TDRD3Q9H7E2 651 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-208ENST00000595726 ZNF70Q9UC06 446 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-208ENST00000595726 H7C1W4 665 aa17.66■□□□□ 0.42
SHKBP1-208ENST00000595726 TLR2O60603 784 aa17.66■□□□□ 0.42
SHKBP1-208ENST00000595726 ZNF853P0CG23 659 aa17.66■□□□□ 0.42
SHKBP1-208ENST00000595726 MAP3K9P80192 1104 aa17.66■□□□□ 0.42
SHKBP1-208ENST00000595726 KIF22Q14807 665 aa17.66■□□□□ 0.42
SHKBP1-208ENST00000595726 KSR2Q6VAB6 950 aa17.66■□□□□ 0.42
SHKBP1-208ENST00000595726 UBE2Q1Q7Z7E8 422 aa17.66■□□□□ 0.42
SHKBP1-208ENST00000595726 NEURL1BA8MQ27 555 aa17.65■□□□□ 0.42
SHKBP1-208ENST00000595726 TCP10L2B9ZVM9 353 aa17.65■□□□□ 0.42
SHKBP1-208ENST00000595726 BTBD19C9JJ37 291 aa17.65■□□□□ 0.42
SHKBP1-208ENST00000595726 TMEM39BQ9GZU3 492 aa17.65■□□□□ 0.42
SHKBP1-208ENST00000595726 OTOFQ9HC10 1997 aa17.65■□□□□ 0.42
SHKBP1-208ENST00000595726 IL1R1P14778 569 aa17.64■□□□□ 0.41
SHKBP1-208ENST00000595726 SPDYE2Q495Y8 402 aa17.64■□□□□ 0.41
SHKBP1-208ENST00000595726 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.64■□□□□ 0.41
SHKBP1-208ENST00000595726 MYBBP1AQ9BQG0 1328 aaKnown RBP17.64■□□□□ 0.41
SHKBP1-208ENST00000595726 ZBTB7BO15156 539 aaPredicted RBP17.63■□□□□ 0.41
SHKBP1-208ENST00000595726 CCL5P13501 91 aa17.63■□□□□ 0.41
SHKBP1-208ENST00000595726 GJA8P48165 433 aa17.63■□□□□ 0.41
SHKBP1-208ENST00000595726 TRIM47Q96LD4 638 aa17.63■□□□□ 0.41
SHKBP1-208ENST00000595726 HTATIP2Q9BUP3 242 aa17.63■□□□□ 0.41
SHKBP1-208ENST00000595726 CPA4Q9UI42 421 aa17.63■□□□□ 0.41
SHKBP1-208ENST00000595726 CSADQ9Y600 493 aa17.63■□□□□ 0.41
SHKBP1-208ENST00000595726 ECM29Q5VYK3 1845 aa17.63■□□□□ 0.41
SHKBP1-208ENST00000595726 CSF1RP07333 972 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms