RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 ALYREFQ86V81 257 aaKnown RBP8.4□□□□□ -1.06
SMAD4-216ENST00000593223 MAP4K3Q8IVH8 894 aa8.4□□□□□ -1.06
SMAD4-216ENST00000593223 DCAF11Q8TEB1 546 aa8.4□□□□□ -1.06
SMAD4-216ENST00000593223 CARD10Q9BWT7 1032 aa8.4□□□□□ -1.06
SMAD4-216ENST00000593223 SRA1Q9HD15 236 aaKnown RBP8.4□□□□□ -1.06
SMAD4-216ENST00000593223 GIPC1O14908 333 aa8.39□□□□□ -1.07
SMAD4-216ENST00000593223 FSCN2O14926 492 aa8.39□□□□□ -1.07
SMAD4-216ENST00000593223 ELNP15502 786 aa8.39□□□□□ -1.07
SMAD4-216ENST00000593223 ZNF326Q5BKZ1 582 aaKnown RBP8.39□□□□□ -1.07
SMAD4-216ENST00000593223 FBXO11Q86XK2 927 aa8.39□□□□□ -1.07
SMAD4-216ENST00000593223 GIPC2Q8TF65 315 aa8.39□□□□□ -1.07
SMAD4-216ENST00000593223 FRMD6Q96NE9 622 aa8.39□□□□□ -1.07
SMAD4-216ENST00000593223 ABCB6Q9NP58 842 aa8.39□□□□□ -1.07
SMAD4-216ENST00000593223 GNA15P30679 374 aa8.38□□□□□ -1.07
SMAD4-216ENST00000593223 PIP4K2BP78356 416 aa8.38□□□□□ -1.07
SMAD4-216ENST00000593223 TAGLNQ01995 201 aaKnown RBP8.38□□□□□ -1.07
SMAD4-216ENST00000593223 PSMD2Q13200 908 aa8.38□□□□□ -1.07
SMAD4-216ENST00000593223 SETDB1Q15047 1291 aa8.38□□□□□ -1.07
SMAD4-216ENST00000593223 GRIK4Q16099 956 aa8.38□□□□□ -1.07
SMAD4-216ENST00000593223 VN1R5Q7Z5H4 357 aa8.38□□□□□ -1.07
SMAD4-216ENST00000593223 TMEM151AQ8N4L1 468 aa8.38□□□□□ -1.07
SMAD4-216ENST00000593223 GLIS3Q8NEA6 775 aa8.38□□□□□ -1.07
SMAD4-216ENST00000593223 SRCIN1Q9C0H9 1055 aa8.38□□□□□ -1.07
SMAD4-216ENST00000593223 BCL11AQ9H165 835 aa8.38□□□□□ -1.07
SMAD4-216ENST00000593223 CLEC4MQ9H2X3 399 aaPredicted RBP8.38□□□□□ -1.07
SMAD4-216ENST00000593223 SEC31BQ9NQW1 1179 aa8.38□□□□□ -1.07
SMAD4-216ENST00000593223 PARP2Q9UGN5 583 aa8.38□□□□□ -1.07
SMAD4-216ENST00000593223 AKAP2Q9Y2D5 859 aa8.38□□□□□ -1.07
SMAD4-216ENST00000593223 DEAF1O75398 565 aaPredicted RBP8.37□□□□□ -1.07
SMAD4-216ENST00000593223 GDF11O95390 407 aa8.37□□□□□ -1.07
SMAD4-216ENST00000593223 EIF4BP23588 611 aaKnown RBP8.37□□□□□ -1.07
SMAD4-216ENST00000593223 PCDH1Q08174 1060 aa8.37□□□□□ -1.07
SMAD4-216ENST00000593223 ILDR2Q71H61 639 aa8.37□□□□□ -1.07
SMAD4-216ENST00000593223 KLHL23Q8NBE8 558 aa8.37□□□□□ -1.07
SMAD4-216ENST00000593223 DCAF5Q96JK2 942 aa8.37□□□□□ -1.07
SMAD4-216ENST00000593223 OSBPL7Q9BZF2 842 aa8.37□□□□□ -1.07
SMAD4-216ENST00000593223 C12orf49Q9H741 205 aa8.37□□□□□ -1.07
SMAD4-216ENST00000593223 ZFYVE1Q9HBF4 777 aa8.37□□□□□ -1.07
SMAD4-216ENST00000593223 SOX1O00570 391 aaPredicted RBP8.36□□□□□ -1.07
SMAD4-216ENST00000593223 ESRRAP11474 423 aaPredicted RBP8.36□□□□□ -1.07
SMAD4-216ENST00000593223 XRCC5P13010 732 aaKnown RBP8.36□□□□□ -1.07
SMAD4-216ENST00000593223 ITPKAP23677 461 aa8.36□□□□□ -1.07
SMAD4-216ENST00000593223 GSTT1P30711 240 aa8.36□□□□□ -1.07
SMAD4-216ENST00000593223 C19orf57Q0VDD7 668 aa8.36□□□□□ -1.07
SMAD4-216ENST00000593223 WNT8BQ93098 351 aa8.36□□□□□ -1.07
SMAD4-216ENST00000593223 NACC1Q96RE7 527 aa8.36□□□□□ -1.07
SMAD4-216ENST00000593223 ZNF576Q9H609 170 aa8.36□□□□□ -1.07
SMAD4-216ENST00000593223 MRS2Q9HD23 443 aa8.36□□□□□ -1.07
SMAD4-216ENST00000593223 OSGEPQ9NPF4 335 aa8.36□□□□□ -1.07
SMAD4-216ENST00000593223 RNF19AQ9NV58 838 aa8.36□□□□□ -1.07
SMAD4-216ENST00000593223 USP21Q9UK80 565 aa8.36□□□□□ -1.07
SMAD4-216ENST00000593223 CD68P34810 354 aaPredicted RBP8.35□□□□□ -1.07
SMAD4-216ENST00000593223 PTPN12Q05209 780 aaKnown RBP8.35□□□□□ -1.07
SMAD4-216ENST00000593223 GALNT11Q8NCW6 608 aa8.35□□□□□ -1.07
SMAD4-216ENST00000593223 FAM161BQ96MY7 647 aa8.35□□□□□ -1.07
SMAD4-216ENST00000593223 FAM8A1Q9UBU6 413 aa8.35□□□□□ -1.07
SMAD4-216ENST00000593223 USP17L7P0C7H9 530 aa8.34□□□□□ -1.07
SMAD4-216ENST00000593223 ITGAEP38570 1179 aa8.34□□□□□ -1.07
SMAD4-216ENST00000593223 GSTM4Q03013 218 aa8.34□□□□□ -1.07
SMAD4-216ENST00000593223 HGSNATQ68CP4 663 aa8.34□□□□□ -1.07
SMAD4-216ENST00000593223 IGF2-ASQ6U949 168 aa8.34□□□□□ -1.07
SMAD4-216ENST00000593223 SHISA2Q6UWI4 295 aa8.34□□□□□ -1.07
SMAD4-216ENST00000593223 DDX54Q8TDD1 881 aaKnown RBP8.34□□□□□ -1.07
SMAD4-216ENST00000593223 KLHDC7BQ96G42 594 aa8.34□□□□□ -1.07
SMAD4-216ENST00000593223 GPN3Q9UHW5 284 aaPredicted RBP8.34□□□□□ -1.07
SMAD4-216ENST00000593223 AK5Q9Y6K8 562 aa8.34□□□□□ -1.07
SMAD4-216ENST00000593223 KRBA1A5PL33 1030 aa8.33□□□□□ -1.08
SMAD4-216ENST00000593223 DLL1O00548 723 aa8.33□□□□□ -1.08
SMAD4-216ENST00000593223 ZNF157P51786 506 aaPredicted RBP8.33□□□□□ -1.08
SMAD4-216ENST00000593223 NLRP12P59046 1061 aa8.33□□□□□ -1.08
SMAD4-216ENST00000593223 DAB2P98082 770 aa8.33□□□□□ -1.08
SMAD4-216ENST00000593223 ZNF423Q2M1K9 1284 aa8.33□□□□□ -1.08
SMAD4-216ENST00000593223 RPS26P11Q5JNZ5 115 aaPredicted RBP8.33□□□□□ -1.08
SMAD4-216ENST00000593223 C9orf172C9J069 976 aa8.32□□□□□ -1.08
SMAD4-216ENST00000593223 DDX3YO15523 660 aaKnown RBP8.32□□□□□ -1.08
SMAD4-216ENST00000593223 SORBS3O60504 671 aa8.32□□□□□ -1.08
SMAD4-216ENST00000593223 TMC4Q7Z404 712 aa8.32□□□□□ -1.08
SMAD4-216ENST00000593223 FOXD4L4Q8WXT5 416 aaPredicted RBP8.32□□□□□ -1.08
SMAD4-216ENST00000593223 VTI1BQ9UEU0 232 aa8.32□□□□□ -1.08
SMAD4-216ENST00000593223 EIF4EBP3O60516 100 aaPredicted RBP8.31□□□□□ -1.08
SMAD4-216ENST00000593223 SELPP16109 830 aa8.31□□□□□ -1.08
SMAD4-216ENST00000593223 ZNF16P17020 682 aaPredicted RBP8.31□□□□□ -1.08
SMAD4-216ENST00000593223 NRG1Q02297 640 aaPredicted RBP8.31□□□□□ -1.08
SMAD4-216ENST00000593223 PPP2R3AQ06190 1150 aa8.31□□□□□ -1.08
SMAD4-216ENST00000593223 DUOXA2Q1HG44 320 aa8.31□□□□□ -1.08
SMAD4-216ENST00000593223 FOXD4L6Q3SYB3 417 aaPredicted RBP8.31□□□□□ -1.08
SMAD4-216ENST00000593223 FOXD4L3Q6VB84 417 aaPredicted RBP8.31□□□□□ -1.08
SMAD4-216ENST00000593223 LENG1Q96BZ8 264 aaPredicted RBP8.31□□□□□ -1.08
SMAD4-216ENST00000593223 USP26Q9BXU7 913 aa8.31□□□□□ -1.08
SMAD4-216ENST00000593223 MRPL18Q9H0U6 180 aaKnown RBP8.31□□□□□ -1.08
SMAD4-216ENST00000593223 SOX17Q9H6I2 414 aaPredicted RBP8.31□□□□□ -1.08
SMAD4-216ENST00000593223 TTF2Q9UNY4 1162 aaKnown RBP8.31□□□□□ -1.08
SMAD4-216ENST00000593223 B3GALT4O96024 378 aa8.3□□□□□ -1.08
SMAD4-216ENST00000593223 TPTE2Q6XPS3 522 aa8.3□□□□□ -1.08
SMAD4-216ENST00000593223 C3orf58Q8NDZ4 430 aa8.3□□□□□ -1.08
SMAD4-216ENST00000593223 RGS22Q8NE09 1264 aa8.3□□□□□ -1.08
SMAD4-216ENST00000593223 KCNK4Q9NYG8 393 aa8.3□□□□□ -1.08
SMAD4-216ENST00000593223 C1QTNF9BB2RNN3 333 aa8.29□□□□□ -1.08
SMAD4-216ENST00000593223 FBXO24O75426 580 aa8.29□□□□□ -1.08
SMAD4-216ENST00000593223 CHRNA4P43681 627 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms