RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 SPDYE6P0CI01 402 aa13.05□□□□□ -0.32
SMCO4P1-201ENST00000592909 SLC4A8Q2Y0W8 1093 aa13.05□□□□□ -0.32
SMCO4P1-201ENST00000592909 CFAP100Q494V2 611 aa13.05□□□□□ -0.32
SMCO4P1-201ENST00000592909 CERS5Q8N5B7 392 aa13.05□□□□□ -0.32
SMCO4P1-201ENST00000592909 PRMT6Q96LA8 375 aaPredicted RBP13.05□□□□□ -0.32
SMCO4P1-201ENST00000592909 CHMP4AQ9BY43 222 aa13.05□□□□□ -0.32
SMCO4P1-201ENST00000592909 MAP3K2Q9Y2U5 619 aa13.05□□□□□ -0.32
SMCO4P1-201ENST00000592909 PCDHAC2Q9Y5I4 1007 aa13.05□□□□□ -0.32
SMCO4P1-201ENST00000592909 PTCH2Q9Y6C5 1203 aa13.05□□□□□ -0.32
SMCO4P1-201ENST00000592909 ZNF646O15015 1829 aaPredicted RBP13.04□□□□□ -0.32
SMCO4P1-201ENST00000592909 CLRN2A0PK11 232 aa13.04□□□□□ -0.32
SMCO4P1-201ENST00000592909 ELL2O00472 640 aaPredicted RBP13.04□□□□□ -0.32
SMCO4P1-201ENST00000592909 FKBP1AP62942 108 aaKnown RBP13.04□□□□□ -0.32
SMCO4P1-201ENST00000592909 KSR2Q6VAB6 950 aa13.04□□□□□ -0.32
SMCO4P1-201ENST00000592909 OPTNQ96CV9 577 aa13.04□□□□□ -0.32
SMCO4P1-201ENST00000592909 ZFYVE28Q9HCC9 887 aa13.04□□□□□ -0.32
SMCO4P1-201ENST00000592909 H7C1W4 665 aa13.03□□□□□ -0.32
SMCO4P1-201ENST00000592909 RASA3Q14644 834 aa13.03□□□□□ -0.32
SMCO4P1-201ENST00000592909 CCDC30Q5VVM6 783 aa13.03□□□□□ -0.32
SMCO4P1-201ENST00000592909 C15orf52Q6ZUT6 534 aaKnown RBP13.03□□□□□ -0.32
SMCO4P1-201ENST00000592909 BRI3BPQ8WY22 251 aa13.03□□□□□ -0.32
SMCO4P1-201ENST00000592909 MPHOSPH8Q99549 860 aa13.03□□□□□ -0.32
SMCO4P1-201ENST00000592909 PLA2G12BQ9BX93 195 aa13.03□□□□□ -0.32
SMCO4P1-201ENST00000592909 VEZTQ9HBM0 779 aa13.03□□□□□ -0.32
SMCO4P1-201ENST00000592909 IFT57Q9NWB7 429 aa13.03□□□□□ -0.32
SMCO4P1-201ENST00000592909 IRS2Q9Y4H2 1338 aa13.03□□□□□ -0.32
SMCO4P1-201ENST00000592909 PI4KAP2A4QPH2 592 aa13.02□□□□□ -0.33
SMCO4P1-201ENST00000592909 CSF1RP07333 972 aa13.02□□□□□ -0.33
SMCO4P1-201ENST00000592909 IL1R1P14778 569 aa13.02□□□□□ -0.33
SMCO4P1-201ENST00000592909 ITGA6P23229 1130 aa13.02□□□□□ -0.33
SMCO4P1-201ENST00000592909 KCNJ4P48050 445 aa13.02□□□□□ -0.33
SMCO4P1-201ENST00000592909 CHRNDQ07001 517 aa13.02□□□□□ -0.33
SMCO4P1-201ENST00000592909 NEXNQ0ZGT2 675 aa13.02□□□□□ -0.33
SMCO4P1-201ENST00000592909 TAF1CQ15572 869 aaPredicted RBP13.02□□□□□ -0.33
SMCO4P1-201ENST00000592909 CHRDL2Q6WN34 429 aa13.02□□□□□ -0.33
SMCO4P1-201ENST00000592909 PI4KAP1Q8N8J0 262 aa13.02□□□□□ -0.33
SMCO4P1-201ENST00000592909 C8orf58Q8NAV2 365 aa13.02□□□□□ -0.33
SMCO4P1-201ENST00000592909 ELP3Q9H9T3 547 aa13.02□□□□□ -0.33
SMCO4P1-201ENST00000592909 AOX1Q06278 1338 aa13.02□□□□□ -0.33
SMCO4P1-201ENST00000592909 LAMB1P07942 1786 aa13.02□□□□□ -0.33
SMCO4P1-201ENST00000592909 NEURL1BA8MQ27 555 aa13.01□□□□□ -0.33
SMCO4P1-201ENST00000592909 F8W031 263 aaPredicted RBP13.01□□□□□ -0.33
SMCO4P1-201ENST00000592909 GTF2A2P52657 109 aa13.01□□□□□ -0.33
SMCO4P1-201ENST00000592909 GNAI1P63096 354 aa13.01□□□□□ -0.33
SMCO4P1-201ENST00000592909 TNFAIP1Q13829 316 aa13.01□□□□□ -0.33
SMCO4P1-201ENST00000592909 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.01□□□□□ -0.33
SMCO4P1-201ENST00000592909 RBM27Q9P2N5 1060 aaKnown RBP13.01□□□□□ -0.33
SMCO4P1-201ENST00000592909 ADAMTS8Q9UP79 889 aa13.01□□□□□ -0.33
SMCO4P1-201ENST00000592909 BRCA2P51587 3418 aa13.01□□□□□ -0.33
SMCO4P1-201ENST00000592909 CENPFP49454 3210 aa13□□□□□ -0.33
SMCO4P1-201ENST00000592909 CCL15-CCL14A0A0B4J2E2 113 aa13□□□□□ -0.33
SMCO4P1-201ENST00000592909 DLL1O00548 723 aa13□□□□□ -0.33
SMCO4P1-201ENST00000592909 GNRH1P01148 92 aa13□□□□□ -0.33
SMCO4P1-201ENST00000592909 CALD1Q05682 793 aaKnown RBP13□□□□□ -0.33
SMCO4P1-201ENST00000592909 WDR43Q15061 677 aaKnown RBP eCLIP13□□□□□ -0.33
SMCO4P1-201ENST00000592909 CCL15Q16663 113 aa13□□□□□ -0.33
SMCO4P1-201ENST00000592909 CWF19L2Q2TBE0 894 aaKnown RBP13□□□□□ -0.33
SMCO4P1-201ENST00000592909 UBE3BQ7Z3V4 1068 aa13□□□□□ -0.33
SMCO4P1-201ENST00000592909 FAM43AQ8N2R8 423 aa13□□□□□ -0.33
SMCO4P1-201ENST00000592909 TEPSINQ96N21 525 aa13□□□□□ -0.33
SMCO4P1-201ENST00000592909 SNAP23O00161 211 aa12.99□□□□□ -0.33
SMCO4P1-201ENST00000592909 TLR2O60603 784 aa12.99□□□□□ -0.33
SMCO4P1-201ENST00000592909 MYCP01106 439 aaPredicted RBP12.99□□□□□ -0.33
SMCO4P1-201ENST00000592909 CASP7P55210 303 aa12.99□□□□□ -0.33
SMCO4P1-201ENST00000592909 PRMT2P55345 433 aa12.99□□□□□ -0.33
SMCO4P1-201ENST00000592909 MAP3K9P80192 1104 aa12.99□□□□□ -0.33
SMCO4P1-201ENST00000592909 KIF22Q14807 665 aa12.99□□□□□ -0.33
SMCO4P1-201ENST00000592909 SPDYE2Q495Y8 402 aa12.99□□□□□ -0.33
SMCO4P1-201ENST00000592909 SH3TC2Q8TF17 1288 aa12.99□□□□□ -0.33
SMCO4P1-201ENST00000592909 CNKSR2Q8WXI2 1034 aa12.99□□□□□ -0.33
SMCO4P1-201ENST00000592909 ZCCHC17Q9NP64 241 aaKnown RBP12.99□□□□□ -0.33
SMCO4P1-201ENST00000592909 ZNF70Q9UC06 446 aaPredicted RBP12.99□□□□□ -0.33
SMCO4P1-201ENST00000592909 MYBBP1AQ9BQG0 1328 aaKnown RBP12.98□□□□□ -0.33
SMCO4P1-201ENST00000592909 WDHD1O75717 1129 aaPredicted RBP12.98□□□□□ -0.33
SMCO4P1-201ENST00000592909 RBM5P52756 815 aaKnown RBP eCLIP12.98□□□□□ -0.33
SMCO4P1-201ENST00000592909 LACTBP83111 547 aaPredicted RBP12.98□□□□□ -0.33
SMCO4P1-201ENST00000592909 VGLL4Q14135 290 aa12.98□□□□□ -0.33
SMCO4P1-201ENST00000592909 GCKRQ14397 625 aa12.98□□□□□ -0.33
SMCO4P1-201ENST00000592909 ZNF804AQ7Z570 1209 aa12.98□□□□□ -0.33
SMCO4P1-201ENST00000592909 SLC17A8Q8NDX2 589 aa12.98□□□□□ -0.33
SMCO4P1-201ENST00000592909 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.98□□□□□ -0.33
SMCO4P1-201ENST00000592909 DPF3Q92784 378 aa12.98□□□□□ -0.33
SMCO4P1-201ENST00000592909 ARHGAP39Q9C0H5 1083 aa12.98□□□□□ -0.33
SMCO4P1-201ENST00000592909 PRO3102Q9H379 93 aa12.98□□□□□ -0.33
SMCO4P1-201ENST00000592909 ANKRD18BA2A2Z9 1011 aa12.97□□□□□ -0.33
SMCO4P1-201ENST00000592909 TAF5LO75529 589 aa12.97□□□□□ -0.33
SMCO4P1-201ENST00000592909 TSPYL6Q8N831 410 aa12.97□□□□□ -0.33
SMCO4P1-201ENST00000592909 NKX2-3Q8TAU0 364 aa12.97□□□□□ -0.33
SMCO4P1-201ENST00000592909 SHISA4Q96DD7 197 aa12.97□□□□□ -0.33
SMCO4P1-201ENST00000592909 SERPINA10Q9UK55 444 aa12.97□□□□□ -0.33
SMCO4P1-201ENST00000592909 CSADQ9Y600 493 aa12.97□□□□□ -0.33
SMCO4P1-201ENST00000592909 SZT2Q5T011 3432 aa12.97□□□□□ -0.33
SMCO4P1-201ENST00000592909 FAM205AQ6ZU69 1335 aa12.96□□□□□ -0.33
SMCO4P1-201ENST00000592909 SPDYE5A6NIY4 337 aa12.96□□□□□ -0.33
SMCO4P1-201ENST00000592909 CETPP11597 493 aa12.96□□□□□ -0.33
SMCO4P1-201ENST00000592909 UBE2Q1Q7Z7E8 422 aa12.96□□□□□ -0.33
SMCO4P1-201ENST00000592909 CDAN1Q8IWY9 1227 aa12.96□□□□□ -0.33
SMCO4P1-201ENST00000592909 HELBQ8NG08 1087 aaPredicted RBP12.96□□□□□ -0.33
SMCO4P1-201ENST00000592909 TDRD3Q9H7E2 651 aaKnown RBP12.96□□□□□ -0.33
SMCO4P1-201ENST00000592909 BTBD19C9JJ37 291 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms