RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 RAC1P63000 192 aa5.98□□□□□ -1.45
VMP1-212ENST00000591782 XPCQ01831 940 aaPredicted RBP5.98□□□□□ -1.45
VMP1-212ENST00000591782 PRRT3Q5FWE3 981 aa5.98□□□□□ -1.45
VMP1-212ENST00000591782 HGSNATQ68CP4 663 aa5.98□□□□□ -1.45
VMP1-212ENST00000591782 DTHD1Q6ZMT9 781 aa5.98□□□□□ -1.45
VMP1-212ENST00000591782 DTWD1Q8N5C7 304 aa5.98□□□□□ -1.45
VMP1-212ENST00000591782 SLC7A3Q8WY07 619 aa5.98□□□□□ -1.45
VMP1-212ENST00000591782 CLEC4MQ9H2X3 399 aaPredicted RBP5.98□□□□□ -1.45
VMP1-212ENST00000591782 ZNF576Q9H609 170 aa5.98□□□□□ -1.45
VMP1-212ENST00000591782 PPP4R2Q9NY27 417 aa5.98□□□□□ -1.45
VMP1-212ENST00000591782 GIPC1O14908 333 aa5.97□□□□□ -1.45
VMP1-212ENST00000591782 FSCN2O14926 492 aa5.97□□□□□ -1.45
VMP1-212ENST00000591782 SPATA31C1P0DKV0 1188 aa5.97□□□□□ -1.45
VMP1-212ENST00000591782 ESRRAP11474 423 aaPredicted RBP5.97□□□□□ -1.45
VMP1-212ENST00000591782 ZNF16P17020 682 aaPredicted RBP5.97□□□□□ -1.45
VMP1-212ENST00000591782 EIF4BP23588 611 aaKnown RBP5.97□□□□□ -1.45
VMP1-212ENST00000591782 DAB2P98082 770 aa5.97□□□□□ -1.45
VMP1-212ENST00000591782 KCNMA1Q12791 1236 aa5.97□□□□□ -1.45
VMP1-212ENST00000591782 PSMD2Q13200 908 aa5.97□□□□□ -1.45
VMP1-212ENST00000591782 IKBKEQ14164 716 aa5.97□□□□□ -1.45
VMP1-212ENST00000591782 GRIK4Q16099 956 aa5.97□□□□□ -1.45
VMP1-212ENST00000591782 ZNF326Q5BKZ1 582 aaKnown RBP5.97□□□□□ -1.45
VMP1-212ENST00000591782 FAM117BQ6P1L5 589 aa5.97□□□□□ -1.45
VMP1-212ENST00000591782 TMC4Q7Z404 712 aa5.97□□□□□ -1.45
VMP1-212ENST00000591782 FBXO11Q86XK2 927 aa5.97□□□□□ -1.45
VMP1-212ENST00000591782 GALNT11Q8NCW6 608 aa5.97□□□□□ -1.45
VMP1-212ENST00000591782 FRMD6Q96NE9 622 aa5.97□□□□□ -1.45
VMP1-212ENST00000591782 SRCIN1Q9C0H9 1055 aa5.97□□□□□ -1.45
VMP1-212ENST00000591782 SOX1O00570 391 aaPredicted RBP5.96□□□□□ -1.46
VMP1-212ENST00000591782 TM4SF5O14894 197 aa5.96□□□□□ -1.46
VMP1-212ENST00000591782 USP17L7P0C7H9 530 aa5.96□□□□□ -1.46
VMP1-212ENST00000591782 ELNP15502 786 aa5.96□□□□□ -1.46
VMP1-212ENST00000591782 GSTT1P30711 240 aa5.96□□□□□ -1.46
VMP1-212ENST00000591782 PIP4K2BP78356 416 aa5.96□□□□□ -1.46
VMP1-212ENST00000591782 RASSF7Q02833 373 aa5.96□□□□□ -1.46
VMP1-212ENST00000591782 PTPN12Q05209 780 aaKnown RBP5.96□□□□□ -1.46
VMP1-212ENST00000591782 PCDH1Q08174 1060 aa5.96□□□□□ -1.46
VMP1-212ENST00000591782 ZNF423Q2M1K9 1284 aa5.96□□□□□ -1.46
VMP1-212ENST00000591782 MAP4K3Q8IVH8 894 aa5.96□□□□□ -1.46
VMP1-212ENST00000591782 C3orf58Q8NDZ4 430 aa5.96□□□□□ -1.46
VMP1-212ENST00000591782 SRA1Q9HD15 236 aaKnown RBP5.96□□□□□ -1.46
VMP1-212ENST00000591782 SEC31BQ9NQW1 1179 aa5.96□□□□□ -1.46
VMP1-212ENST00000591782 FAM8A1Q9UBU6 413 aa5.96□□□□□ -1.46
VMP1-212ENST00000591782 AKAP2Q9Y2D5 859 aa5.96□□□□□ -1.46
VMP1-212ENST00000591782 AK5Q9Y6K8 562 aa5.96□□□□□ -1.46
VMP1-212ENST00000591782 RBM47A0AV96 593 aaKnown RBP5.95□□□□□ -1.46
VMP1-212ENST00000591782 DLL1O00548 723 aa5.95□□□□□ -1.46
VMP1-212ENST00000591782 XRCC5P13010 732 aaKnown RBP5.95□□□□□ -1.46
VMP1-212ENST00000591782 FAAP100Q0VG06 881 aa5.95□□□□□ -1.46
VMP1-212ENST00000591782 FOXD4L6Q3SYB3 417 aaPredicted RBP5.95□□□□□ -1.46
VMP1-212ENST00000591782 SHISA2Q6UWI4 295 aa5.95□□□□□ -1.46
VMP1-212ENST00000591782 FOXD4L3Q6VB84 417 aaPredicted RBP5.95□□□□□ -1.46
VMP1-212ENST00000591782 ALYREFQ86V81 257 aaKnown RBP5.95□□□□□ -1.46
VMP1-212ENST00000591782 KLHL23Q8NBE8 558 aa5.95□□□□□ -1.46
VMP1-212ENST00000591782 WNT8BQ93098 351 aa5.95□□□□□ -1.46
VMP1-212ENST00000591782 KLHDC7BQ96G42 594 aa5.95□□□□□ -1.46
VMP1-212ENST00000591782 DCAF5Q96JK2 942 aa5.95□□□□□ -1.46
VMP1-212ENST00000591782 OSGEPQ9NPF4 335 aa5.95□□□□□ -1.46
VMP1-212ENST00000591782 KRBA1A5PL33 1030 aa5.94□□□□□ -1.46
VMP1-212ENST00000591782 DDX3YO15523 660 aaKnown RBP5.94□□□□□ -1.46
VMP1-212ENST00000591782 SORBS3O60504 671 aa5.94□□□□□ -1.46
VMP1-212ENST00000591782 B3GALT4O96024 378 aa5.94□□□□□ -1.46
VMP1-212ENST00000591782 SELPP16109 830 aa5.94□□□□□ -1.46
VMP1-212ENST00000591782 ARL4DP49703 201 aa5.94□□□□□ -1.46
VMP1-212ENST00000591782 ZNF157P51786 506 aaPredicted RBP5.94□□□□□ -1.46
VMP1-212ENST00000591782 MRS2Q9HD23 443 aa5.94□□□□□ -1.46
VMP1-212ENST00000591782 KCNK4Q9NYG8 393 aa5.94□□□□□ -1.46
VMP1-212ENST00000591782 ADAM11O75078 769 aa5.93□□□□□ -1.46
VMP1-212ENST00000591782 FBXO24O75426 580 aa5.93□□□□□ -1.46
VMP1-212ENST00000591782 CD68P34810 354 aaPredicted RBP5.93□□□□□ -1.46
VMP1-212ENST00000591782 NLRP12P59046 1061 aa5.93□□□□□ -1.46
VMP1-212ENST00000591782 GSTM4Q03013 218 aa5.93□□□□□ -1.46
VMP1-212ENST00000591782 C19orf57Q0VDD7 668 aa5.93□□□□□ -1.46
VMP1-212ENST00000591782 SUZ12Q15022 739 aaKnown RBP5.93□□□□□ -1.46
VMP1-212ENST00000591782 RPS26P11Q5JNZ5 115 aaPredicted RBP5.93□□□□□ -1.46
VMP1-212ENST00000591782 TPTE2Q6XPS3 522 aa5.93□□□□□ -1.46
VMP1-212ENST00000591782 SOX17Q9H6I2 414 aaPredicted RBP5.93□□□□□ -1.46
VMP1-212ENST00000591782 ZFYVE1Q9HBF4 777 aa5.93□□□□□ -1.46
VMP1-212ENST00000591782 VTI1BQ9UEU0 232 aa5.93□□□□□ -1.46
VMP1-212ENST00000591782 GPN3Q9UHW5 284 aaPredicted RBP5.93□□□□□ -1.46
VMP1-212ENST00000591782 WISP1O95388 367 aa5.92□□□□□ -1.46
VMP1-212ENST00000591782 GDF11O95390 407 aa5.92□□□□□ -1.46
VMP1-212ENST00000591782 APBA3O96018 575 aa5.92□□□□□ -1.46
VMP1-212ENST00000591782 CTSHP09668 335 aa5.92□□□□□ -1.46
VMP1-212ENST00000591782 CHRNA4P43681 627 aa5.92□□□□□ -1.46
VMP1-212ENST00000591782 IGF2-ASQ6U949 168 aa5.92□□□□□ -1.46
VMP1-212ENST00000591782 DCAF11Q8TEB1 546 aa5.92□□□□□ -1.46
VMP1-212ENST00000591782 MRPL58Q14197 206 aaKnown RBP5.91□□□□□ -1.46
VMP1-212ENST00000591782 MEI1Q5TIA1 1274 aa5.91□□□□□ -1.46
VMP1-212ENST00000591782 TMEM151AQ8N4L1 468 aa5.91□□□□□ -1.46
VMP1-212ENST00000591782 UBASH3BQ8TF42 649 aa5.91□□□□□ -1.46
VMP1-212ENST00000591782 LENG1Q96BZ8 264 aaPredicted RBP5.91□□□□□ -1.46
VMP1-212ENST00000591782 NACC1Q96RE7 527 aa5.91□□□□□ -1.46
VMP1-212ENST00000591782 TRIM56Q9BRZ2 755 aaKnown RBP5.91□□□□□ -1.46
VMP1-212ENST00000591782 NRSN2Q9GZP1 204 aa5.91□□□□□ -1.46
VMP1-212ENST00000591782 USP21Q9UK80 565 aa5.91□□□□□ -1.46
VMP1-212ENST00000591782 PPM1HQ9ULR3 514 aa5.91□□□□□ -1.46
VMP1-212ENST00000591782 TTF2Q9UNY4 1162 aaKnown RBP5.91□□□□□ -1.46
VMP1-212ENST00000591782 C1QTNF9BB2RNN3 333 aa5.9□□□□□ -1.46
VMP1-212ENST00000591782 C9orf172C9J069 976 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms