RNA–Protein interactions for RNA: ENST00000591226.1

TPM4-213, Transcript of tropomyosin 4, humanhuman

Gene TPM4, Length 2,672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-213ENST00000591226 RPS6KA4O75676 772 aa13.43□□□□□ -0.26
TPM4-213ENST00000591226 NCLP19338 710 aaKnown RBP13.43□□□□□ -0.26
TPM4-213ENST00000591226 STK3Q13188 491 aa13.43□□□□□ -0.26
TPM4-213ENST00000591226 TTF1Q15361 905 aaPredicted RBP13.43□□□□□ -0.26
TPM4-213ENST00000591226 GPT2Q8TD30 523 aa13.43□□□□□ -0.26
TPM4-213ENST00000591226 E7EWF7 191 aa13.42□□□□□ -0.26
TPM4-213ENST00000591226 GPAA1O43292 621 aa13.42□□□□□ -0.26
TPM4-213ENST00000591226 IDH1O75874 414 aaKnown RBP13.42□□□□□ -0.26
TPM4-213ENST00000591226 ADD2P35612 726 aa13.42□□□□□ -0.26
TPM4-213ENST00000591226 SLC9C2Q5TAH2 1124 aa13.42□□□□□ -0.26
TPM4-213ENST00000591226 AMIGO3Q86WK7 504 aa13.42□□□□□ -0.26
TPM4-213ENST00000591226 NARFQ9UHQ1 456 aa13.42□□□□□ -0.26
TPM4-213ENST00000591226 SBF2Q86WG5 1849 aa13.42□□□□□ -0.26
TPM4-213ENST00000591226 CHRNDQ07001 517 aa13.42□□□□□ -0.26
TPM4-213ENST00000591226 TAF1P21675 1872 aa13.42□□□□□ -0.26
TPM4-213ENST00000591226 RASGRF1Q13972 1273 aa13.41□□□□□ -0.26
TPM4-213ENST00000591226 ZSCAN25Q6NSZ9 544 aa13.41□□□□□ -0.26
TPM4-213ENST00000591226 CAVIN1Q6NZI2 390 aaKnown RBP13.41□□□□□ -0.26
TPM4-213ENST00000591226 DHX32Q7L7V1 743 aaKnown RBP13.41□□□□□ -0.26
TPM4-213ENST00000591226 CDC5LQ99459 802 aaKnown RBP13.41□□□□□ -0.26
TPM4-213ENST00000591226 ATRNO75882 1429 aa13.41□□□□□ -0.26
TPM4-213ENST00000591226 LY75O60449 1722 aa13.41□□□□□ -0.26
TPM4-213ENST00000591226 TAF1LQ8IZX4 1826 aa13.41□□□□□ -0.26
TPM4-213ENST00000591226 HMGB1P09429 215 aaKnown RBP13.41□□□□□ -0.26
TPM4-213ENST00000591226 SPATA5Q8NB90 893 aa13.41□□□□□ -0.26
TPM4-213ENST00000591226 BRF1Q92994 677 aa13.41□□□□□ -0.26
TPM4-213ENST00000591226 GDPD2Q9HCC8 539 aa13.41□□□□□ -0.26
TPM4-213ENST00000591226 WWC3Q9ULE0 1092 aa13.41□□□□□ -0.26
TPM4-213ENST00000591226 MTMR6Q9Y217 621 aa13.41□□□□□ -0.26
TPM4-213ENST00000591226 TCHHQ07283 1943 aa13.41□□□□□ -0.26
TPM4-213ENST00000591226 F13A1P00488 732 aa13.4□□□□□ -0.26
TPM4-213ENST00000591226 PDE6AP16499 860 aa13.4□□□□□ -0.26
TPM4-213ENST00000591226 GTF2E1P29083 439 aaPredicted RBP13.4□□□□□ -0.26
TPM4-213ENST00000591226 HAND2P61296 217 aa13.4□□□□□ -0.26
TPM4-213ENST00000591226 SF3B3Q15393 1217 aaKnown RBP13.4□□□□□ -0.26
TPM4-213ENST00000591226 ZPR1O75312 459 aa13.4□□□□□ -0.26
TPM4-213ENST00000591226 FGAP02671 866 aa13.4□□□□□ -0.26
TPM4-213ENST00000591226 BCAMP50895 628 aa13.4□□□□□ -0.26
TPM4-213ENST00000591226 GAS2L3Q86XJ1 694 aa13.4□□□□□ -0.26
TPM4-213ENST00000591226 SEPT12Q8IYM1 358 aa13.4□□□□□ -0.26
TPM4-213ENST00000591226 GTF3C6Q969F1 213 aa13.4□□□□□ -0.26
TPM4-213ENST00000591226 CTNNA3Q9UI47 895 aa13.4□□□□□ -0.26
TPM4-213ENST00000591226 NSFL1CQ9UNZ2 370 aaKnown RBP13.4□□□□□ -0.26
TPM4-213ENST00000591226 RTCBQ9Y3I0 505 aaKnown RBP13.4□□□□□ -0.26
TPM4-213ENST00000591226 COL24A1Q17RW2 1714 aa13.4□□□□□ -0.26
TPM4-213ENST00000591226 ZNF532Q9HCE3 1301 aa13.4□□□□□ -0.26
TPM4-213ENST00000591226 A0A1B0GUL6 1792 aa13.39□□□□□ -0.27
TPM4-213ENST00000591226 VPS37CA5D8V6 355 aaPredicted RBP13.39□□□□□ -0.27
TPM4-213ENST00000591226 XRCC6P12956 609 aaKnown RBP eCLIP13.39□□□□□ -0.27
TPM4-213ENST00000591226 EXOSC10Q01780 885 aaKnown RBP13.39□□□□□ -0.27
TPM4-213ENST00000591226 UBE3CQ15386 1083 aa13.39□□□□□ -0.27
TPM4-213ENST00000591226 ANKRD18AQ8IVF6 992 aa13.39□□□□□ -0.27
TPM4-213ENST00000591226 DOCK2Q92608 1830 aa13.39□□□□□ -0.27
TPM4-213ENST00000591226 TCRBV5S4A2TA0A5A2 114 aa13.39□□□□□ -0.27
TPM4-213ENST00000591226 ONECUT3O60422 494 aaPredicted RBP13.39□□□□□ -0.27
TPM4-213ENST00000591226 IMMTQ16891 758 aaKnown RBP13.39□□□□□ -0.27
TPM4-213ENST00000591226 SETDB2Q96T68 719 aa13.39□□□□□ -0.27
TPM4-213ENST00000591226 RBM27Q9P2N5 1060 aaKnown RBP13.39□□□□□ -0.27
TPM4-213ENST00000591226 TRPC5Q9UL62 973 aaPredicted RBP13.39□□□□□ -0.27
TPM4-213ENST00000591226 SLC10A5Q5PT55 438 aa13.38□□□□□ -0.27
TPM4-213ENST00000591226 CHST3Q7LGC8 479 aa13.38□□□□□ -0.27
TPM4-213ENST00000591226 ARHGEF1Q92888 912 aaKnown RBP13.38□□□□□ -0.27
TPM4-213ENST00000591226 C4BP0C0L5 1744 aa13.38□□□□□ -0.27
TPM4-213ENST00000591226 EP400Q96L91 3159 aa13.38□□□□□ -0.27
TPM4-213ENST00000591226 RRP9O43818 475 aaKnown RBP13.38□□□□□ -0.27
TPM4-213ENST00000591226 APOBRQ0VD83 1088 aa13.38□□□□□ -0.27
TPM4-213ENST00000591226 LARP1BQ659C4 914 aaKnown RBP13.38□□□□□ -0.27
TPM4-213ENST00000591226 NBPF5PQ86XG9 351 aaPredicted RBP13.38□□□□□ -0.27
TPM4-213ENST00000591226 CCDC24Q8N4L8 307 aa13.38□□□□□ -0.27
TPM4-213ENST00000591226 NYXQ9GZU5 481 aa13.38□□□□□ -0.27
TPM4-213ENST00000591226 CNPY2Q9Y2B0 182 aa13.38□□□□□ -0.27
TPM4-213ENST00000591226 C4AP0C0L4 1744 aa13.38□□□□□ -0.27
TPM4-213ENST00000591226 JAK2O60674 1132 aa13.37□□□□□ -0.27
TPM4-213ENST00000591226 ZSCAN23Q3MJ62 389 aa13.37□□□□□ -0.27
TPM4-213ENST00000591226 USP48Q86UV5 1035 aa13.37□□□□□ -0.27
TPM4-213ENST00000591226 CELF1Q92879 486 aaKnown RBP13.37□□□□□ -0.27
TPM4-213ENST00000591226 BCL11BQ9C0K0 894 aaPredicted RBP13.37□□□□□ -0.27
TPM4-213ENST00000591226 ISY1Q9ULR0 285 aaKnown RBP13.37□□□□□ -0.27
TPM4-213ENST00000591226 WTIPA6NIX2 430 aaPredicted RBP13.37□□□□□ -0.27
TPM4-213ENST00000591226 PHF14O94880 888 aa13.37□□□□□ -0.27
TPM4-213ENST00000591226 MRE11P49959 708 aa13.37□□□□□ -0.27
TPM4-213ENST00000591226 MAPK8IP2Q13387 824 aaPredicted RBP13.37□□□□□ -0.27
TPM4-213ENST00000591226 CDC37L1Q7L3B6 337 aa13.37□□□□□ -0.27
TPM4-213ENST00000591226 AGXT2Q9BYV1 514 aa13.37□□□□□ -0.27
TPM4-213ENST00000591226 GRPEL1Q9HAV7 217 aa13.37□□□□□ -0.27
TPM4-213ENST00000591226 BSDC1Q9NW68 430 aaPredicted RBP13.37□□□□□ -0.27
TPM4-213ENST00000591226 GADD45BO75293 160 aaPredicted RBP13.36□□□□□ -0.27
TPM4-213ENST00000591226 MBD3O95983 291 aa13.36□□□□□ -0.27
TPM4-213ENST00000591226 SCRN1Q12765 414 aa13.36□□□□□ -0.27
TPM4-213ENST00000591226 MAGEB6Q8N7X4 407 aa13.36□□□□□ -0.27
TPM4-213ENST00000591226 PANK2Q9BZ23 570 aa13.36□□□□□ -0.27
TPM4-213ENST00000591226 PFKFB2O60825 505 aa13.36□□□□□ -0.27
TPM4-213ENST00000591226 PDCP20941 246 aa13.36□□□□□ -0.27
TPM4-213ENST00000591226 MAP3K12Q12852 859 aa13.36□□□□□ -0.27
TPM4-213ENST00000591226 NAP1L5Q96NT1 182 aaPredicted RBP13.36□□□□□ -0.27
TPM4-213ENST00000591226 RRAGDQ9NQL2 400 aaPredicted RBP13.36□□□□□ -0.27
TPM4-213ENST00000591226 TMEM63CQ9P1W3 806 aa13.36□□□□□ -0.27
TPM4-213ENST00000591226 IQSEC3Q9UPP2 1182 aaPredicted RBP13.36□□□□□ -0.27
TPM4-213ENST00000591226 ATP6V1DQ9Y5K8 247 aa13.36□□□□□ -0.27
TPM4-213ENST00000591226 ZNF213O14771 459 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms