RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 TTLL5Q6EMB2 1281 aa8.53□□□□□ -1.04
DNMT1-222ENST00000590619 FAM109BQ6ICB4 259 aaPredicted RBP8.53□□□□□ -1.04
DNMT1-222ENST00000590619 C17orf99Q6UX52 265 aa8.53□□□□□ -1.04
DNMT1-222ENST00000590619 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.53□□□□□ -1.04
DNMT1-222ENST00000590619 TDHQ8IZJ6 230 aa8.53□□□□□ -1.04
DNMT1-222ENST00000590619 RAET1EQ8TD07 263 aa8.53□□□□□ -1.04
DNMT1-222ENST00000590619 PAWRQ96IZ0 340 aaKnown RBP8.53□□□□□ -1.04
DNMT1-222ENST00000590619 BIN2Q9UBW5 565 aaPredicted RBP8.53□□□□□ -1.04
DNMT1-222ENST00000590619 PPP2R3BQ9Y5P8 575 aa8.53□□□□□ -1.04
DNMT1-222ENST00000590619 LRRC37AA6NMS7 1700 aa8.53□□□□□ -1.04
DNMT1-222ENST00000590619 LAMB2P55268 1798 aa8.53□□□□□ -1.04
DNMT1-222ENST00000590619 MYO3BQ8WXR4 1341 aa8.53□□□□□ -1.04
DNMT1-222ENST00000590619 SSC5DA1L4H1 1573 aa8.52□□□□□ -1.04
DNMT1-222ENST00000590619 BTBD19C9JJ37 291 aa8.52□□□□□ -1.05
DNMT1-222ENST00000590619 SYN1P17600 705 aa8.52□□□□□ -1.05
DNMT1-222ENST00000590619 HOXD11P31277 338 aaPredicted RBP8.52□□□□□ -1.05
DNMT1-222ENST00000590619 MAGEA10P43363 369 aaPredicted RBP8.52□□□□□ -1.05
DNMT1-222ENST00000590619 UBXN2AP68543 259 aa8.52□□□□□ -1.05
DNMT1-222ENST00000590619 EIF4G2P78344 907 aaKnown RBP eCLIP8.52□□□□□ -1.05
DNMT1-222ENST00000590619 CNGB1Q14028 1251 aaPredicted RBP8.52□□□□□ -1.05
DNMT1-222ENST00000590619 DLGAP5Q15398 846 aa8.52□□□□□ -1.05
DNMT1-222ENST00000590619 TXNRD3Q86VQ6 643 aa8.52□□□□□ -1.05
DNMT1-222ENST00000590619 FAM122AQ96E09 287 aa8.52□□□□□ -1.05
DNMT1-222ENST00000590619 PRMT6Q96LA8 375 aaPredicted RBP8.52□□□□□ -1.05
DNMT1-222ENST00000590619 FAM161BQ96MY7 647 aa8.52□□□□□ -1.05
DNMT1-222ENST00000590619 COA1Q9GZY4 146 aa8.52□□□□□ -1.05
DNMT1-222ENST00000590619 XDHP47989 1333 aa8.52□□□□□ -1.05
DNMT1-222ENST00000590619 CLRN2A0PK11 232 aa8.51□□□□□ -1.05
DNMT1-222ENST00000590619 FMNL1O95466 1100 aaPredicted RBP8.51□□□□□ -1.05
DNMT1-222ENST00000590619 MAP3K9P80192 1104 aa8.51□□□□□ -1.05
DNMT1-222ENST00000590619 RASA3Q14644 834 aa8.51□□□□□ -1.05
DNMT1-222ENST00000590619 C7orf61Q8IZ16 206 aa8.51□□□□□ -1.05
DNMT1-222ENST00000590619 MTMR14Q8NCE2 650 aa8.51□□□□□ -1.05
DNMT1-222ENST00000590619 HELBQ8NG08 1087 aaPredicted RBP8.51□□□□□ -1.05
DNMT1-222ENST00000590619 CPA4Q9UI42 421 aa8.51□□□□□ -1.05
DNMT1-222ENST00000590619 NUDCQ9Y266 331 aa8.51□□□□□ -1.05
DNMT1-222ENST00000590619 ZNF804BA4D1E1 1349 aa8.51□□□□□ -1.05
DNMT1-222ENST00000590619 AOX1Q06278 1338 aa8.51□□□□□ -1.05
DNMT1-222ENST00000590619 IRS2Q9Y4H2 1338 aa8.51□□□□□ -1.05
DNMT1-222ENST00000590619 WDHD1O75717 1129 aaPredicted RBP8.5□□□□□ -1.05
DNMT1-222ENST00000590619 CAPN2P17655 700 aa8.5□□□□□ -1.05
DNMT1-222ENST00000590619 GTF2IP78347 998 aa8.5□□□□□ -1.05
DNMT1-222ENST00000590619 TRIM28Q13263 835 aaKnown RBP8.5□□□□□ -1.05
DNMT1-222ENST00000590619 NECAB2Q7Z6G3 386 aa8.5□□□□□ -1.05
DNMT1-222ENST00000590619 PLBD2Q8NHP8 589 aa8.5□□□□□ -1.05
DNMT1-222ENST00000590619 DIS3LQ8TF46 1054 aaKnown RBP8.5□□□□□ -1.05
DNMT1-222ENST00000590619 SYMPKQ92797 1274 aaKnown RBP8.5□□□□□ -1.05
DNMT1-222ENST00000590619 DEFB118Q96PH6 123 aa8.5□□□□□ -1.05
DNMT1-222ENST00000590619 CCDC85AQ96PX6 553 aaPredicted RBP8.5□□□□□ -1.05
DNMT1-222ENST00000590619 UBE2OQ9C0C9 1292 aaKnown RBP8.5□□□□□ -1.05
DNMT1-222ENST00000590619 CRISPLD2Q9H0B8 497 aa8.5□□□□□ -1.05
DNMT1-222ENST00000590619 GABRQQ9UN88 632 aa8.5□□□□□ -1.05
DNMT1-222ENST00000590619 MINPP1Q9UNW1 487 aa8.5□□□□□ -1.05
DNMT1-222ENST00000590619 ZNF646O15015 1829 aaPredicted RBP8.5□□□□□ -1.05
DNMT1-222ENST00000590619 TTC28Q96AY4 2481 aa8.49□□□□□ -1.05
DNMT1-222ENST00000590619 TNFRSF10AO00220 468 aa8.49□□□□□ -1.05
DNMT1-222ENST00000590619 CETPP11597 493 aa8.49□□□□□ -1.05
DNMT1-222ENST00000590619 PRKCZQ05513 592 aa8.49□□□□□ -1.05
DNMT1-222ENST00000590619 VGLL4Q14135 290 aa8.49□□□□□ -1.05
DNMT1-222ENST00000590619 CFAP100Q494V2 611 aa8.49□□□□□ -1.05
DNMT1-222ENST00000590619 ANKRD18AQ8IVF6 992 aa8.49□□□□□ -1.05
DNMT1-222ENST00000590619 CERS5Q8N5B7 392 aa8.49□□□□□ -1.05
DNMT1-222ENST00000590619 CDX2Q99626 313 aaPredicted RBP8.49□□□□□ -1.05
DNMT1-222ENST00000590619 ZCCHC17Q9NP64 241 aaKnown RBP8.49□□□□□ -1.05
DNMT1-222ENST00000590619 MYPNQ86TC9 1320 aa8.49□□□□□ -1.05
DNMT1-222ENST00000590619 CCT4P50991 539 aaKnown RBP8.48□□□□□ -1.05
DNMT1-222ENST00000590619 CCDC152Q4G0S7 254 aa8.48□□□□□ -1.05
DNMT1-222ENST00000590619 CDAN1Q8IWY9 1227 aa8.48□□□□□ -1.05
DNMT1-222ENST00000590619 ZBTB38Q8NAP3 1195 aaPredicted RBP8.48□□□□□ -1.05
DNMT1-222ENST00000590619 SLAIN1Q8ND83 568 aa8.48□□□□□ -1.05
DNMT1-222ENST00000590619 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.48□□□□□ -1.05
DNMT1-222ENST00000590619 MAFAQ8NHW3 353 aaPredicted RBP8.48□□□□□ -1.05
DNMT1-222ENST00000590619 JARID2Q92833 1246 aaPredicted RBP8.48□□□□□ -1.05
DNMT1-222ENST00000590619 TEPSINQ96N21 525 aa8.48□□□□□ -1.05
DNMT1-222ENST00000590619 VEZTQ9HBM0 779 aa8.48□□□□□ -1.05
DNMT1-222ENST00000590619 TSPYL4Q9UJ04 414 aa8.48□□□□□ -1.05
DNMT1-222ENST00000590619 COL1A1P02452 1464 aaPredicted RBP8.48□□□□□ -1.05
DNMT1-222ENST00000590619 MUC3AQ02505 3323 aa8.48□□□□□ -1.05
DNMT1-222ENST00000590619 MED23Q9ULK4 1368 aa8.48□□□□□ -1.05
DNMT1-222ENST00000590619 PRUNE2Q8WUY3 3088 aa8.47□□□□□ -1.05
DNMT1-222ENST00000590619 DDX60Q8IY21 1712 aaKnown RBP8.47□□□□□ -1.05
DNMT1-222ENST00000590619 SPDYE2BA6NHP3 402 aa8.47□□□□□ -1.05
DNMT1-222ENST00000590619 IRF6O14896 467 aa8.47□□□□□ -1.05
DNMT1-222ENST00000590619 MYO1BO43795 1136 aa8.47□□□□□ -1.05
DNMT1-222ENST00000590619 ADCY3O60266 1144 aa8.47□□□□□ -1.05
DNMT1-222ENST00000590619 PDE8AO60658 829 aa8.47□□□□□ -1.05
DNMT1-222ENST00000590619 SPDYE6P0CI01 402 aa8.47□□□□□ -1.05
DNMT1-222ENST00000590619 KLRK1P26718 216 aa8.47□□□□□ -1.05
DNMT1-222ENST00000590619 CFAP53Q96M91 514 aa8.47□□□□□ -1.05
DNMT1-222ENST00000590619 SEMA6BQ9H3T3 888 aa8.47□□□□□ -1.05
DNMT1-222ENST00000590619 PAK6Q9NQU5 681 aaPredicted RBP8.47□□□□□ -1.05
DNMT1-222ENST00000590619 BSDC1Q9NW68 430 aaPredicted RBP8.47□□□□□ -1.05
DNMT1-222ENST00000590619 EYSQ5T1H1 3165 aa8.47□□□□□ -1.05
DNMT1-222ENST00000590619 ZSWIM8A7E2V4 1837 aa8.47□□□□□ -1.05
DNMT1-222ENST00000590619 LAMB4A4D0S4 1761 aa8.46□□□□□ -1.05
DNMT1-222ENST00000590619 SPDYE5A6NIY4 337 aa8.46□□□□□ -1.06
DNMT1-222ENST00000590619 F8W031 263 aaPredicted RBP8.46□□□□□ -1.06
DNMT1-222ENST00000590619 INHAP05111 366 aa8.46□□□□□ -1.06
DNMT1-222ENST00000590619 ELNP15502 786 aa8.46□□□□□ -1.06
DNMT1-222ENST00000590619 FLT3LGP49771 235 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms