RNA–Protein interactions for RNA: ENST00000589669.1

CCDC130-211, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-211ENST00000589669 VPS9D1Q9Y2B5 631 aa16.78■□□□□ 0.28
CCDC130-211ENST00000589669 GCKRQ14397 625 aa16.77■□□□□ 0.28
CCDC130-211ENST00000589669 LDHDQ86WU2 507 aa16.77■□□□□ 0.28
CCDC130-211ENST00000589669 LINS1Q8NG48 757 aa16.77■□□□□ 0.28
CCDC130-211ENST00000589669 TTLL11Q8NHH1 800 aa16.77■□□□□ 0.28
CCDC130-211ENST00000589669 TATDN2Q93075 761 aa16.77■□□□□ 0.28
CCDC130-211ENST00000589669 NSFL1CQ9UNZ2 370 aaKnown RBP16.77■□□□□ 0.28
CCDC130-211ENST00000589669 GJA3Q9Y6H8 435 aa16.77■□□□□ 0.28
CCDC130-211ENST00000589669 EPHX2P34913 555 aa16.76■□□□□ 0.27
CCDC130-211ENST00000589669 LSM11P83369 360 aaKnown RBP eCLIP16.76■□□□□ 0.27
CCDC130-211ENST00000589669 CXCL9Q07325 125 aa16.76■□□□□ 0.27
CCDC130-211ENST00000589669 PODXL2Q9NZ53 605 aa16.76■□□□□ 0.27
CCDC130-211ENST00000589669 POLLQ9UGP5 575 aa16.76■□□□□ 0.27
CCDC130-211ENST00000589669 COL4A5P29400 1685 aa16.75■□□□□ 0.27
CCDC130-211ENST00000589669 CTSWP56202 376 aa16.75■□□□□ 0.27
CCDC130-211ENST00000589669 GPSM2P81274 684 aa16.75■□□□□ 0.27
CCDC130-211ENST00000589669 WASHC4Q2M389 1173 aa16.75■□□□□ 0.27
CCDC130-211ENST00000589669 RABGEF1Q9UJ41 708 aa16.75■□□□□ 0.27
CCDC130-211ENST00000589669 E9PSI1 815 aa16.74■□□□□ 0.27
CCDC130-211ENST00000589669 SMAPO00193 183 aa16.74■□□□□ 0.27
CCDC130-211ENST00000589669 SCNN1DP51172 638 aa16.74■□□□□ 0.27
CCDC130-211ENST00000589669 TNIP1Q15025 636 aa16.74■□□□□ 0.27
CCDC130-211ENST00000589669 PARP9Q8IXQ6 854 aa16.74■□□□□ 0.27
CCDC130-211ENST00000589669 NLRP7Q8WX94 980 aa16.74■□□□□ 0.27
CCDC130-211ENST00000589669 PLA2G12BQ9BX93 195 aa16.74■□□□□ 0.27
CCDC130-211ENST00000589669 DDX60Q8IY21 1712 aaKnown RBP16.73■□□□□ 0.27
CCDC130-211ENST00000589669 C6orf229H3BNL8 230 aa16.73■□□□□ 0.27
CCDC130-211ENST00000589669 LMOD1P29536 600 aaPredicted RBP16.73■□□□□ 0.27
CCDC130-211ENST00000589669 CASP7P55210 303 aa16.73■□□□□ 0.27
CCDC130-211ENST00000589669 HTRA3P83110 453 aa16.73■□□□□ 0.27
CCDC130-211ENST00000589669 SLFN5Q08AF3 891 aa16.73■□□□□ 0.27
CCDC130-211ENST00000589669 UBE3BQ7Z3V4 1068 aa16.73■□□□□ 0.27
CCDC130-211ENST00000589669 ANKRD18AQ8IVF6 992 aa16.73■□□□□ 0.27
CCDC130-211ENST00000589669 TBC1D16Q8TBP0 767 aa16.73■□□□□ 0.27
CCDC130-211ENST00000589669 CDC5LQ99459 802 aaKnown RBP16.73■□□□□ 0.27
CCDC130-211ENST00000589669 EYA3Q99504 573 aa16.73■□□□□ 0.27
CCDC130-211ENST00000589669 LAMB2P55268 1798 aa16.73■□□□□ 0.27
CCDC130-211ENST00000589669 TK2O00142 265 aa16.72■□□□□ 0.27
CCDC130-211ENST00000589669 ITGBL1O95965 494 aaPredicted RBP16.72■□□□□ 0.27
CCDC130-211ENST00000589669 CSF1RP07333 972 aa16.72■□□□□ 0.27
CCDC130-211ENST00000589669 EPS15P42566 896 aa16.72■□□□□ 0.27
CCDC130-211ENST00000589669 TTLL12Q14166 644 aaPredicted RBP16.72■□□□□ 0.27
CCDC130-211ENST00000589669 EAPPQ56P03 285 aaPredicted RBP16.72■□□□□ 0.27
CCDC130-211ENST00000589669 BEND3Q5T5X7 828 aa16.72■□□□□ 0.27
CCDC130-211ENST00000589669 CIAPIN1Q6FI81 312 aa16.72■□□□□ 0.27
CCDC130-211ENST00000589669 POTEGQ6S5H5 508 aa16.72■□□□□ 0.27
CCDC130-211ENST00000589669 CCDC85AQ96PX6 553 aaPredicted RBP16.72■□□□□ 0.27
CCDC130-211ENST00000589669 BSDC1Q9NW68 430 aaPredicted RBP16.72■□□□□ 0.27
CCDC130-211ENST00000589669 RTL9Q8NET4 1388 aa16.72■□□□□ 0.27
CCDC130-211ENST00000589669 SCN4AP35499 1836 aa16.71■□□□□ 0.27
CCDC130-211ENST00000589669 YDJCA8MPS7 323 aa16.71■□□□□ 0.27
CCDC130-211ENST00000589669 F6X3S4 739 aa16.71■□□□□ 0.27
CCDC130-211ENST00000589669 USP50Q70EL3 339 aaPredicted RBP16.71■□□□□ 0.27
CCDC130-211ENST00000589669 KLRG1Q96E93 195 aa16.71■□□□□ 0.27
CCDC130-211ENST00000589669 ZC3H12CQ9C0D7 883 aaKnown RBP16.71■□□□□ 0.27
CCDC130-211ENST00000589669 GREM2Q9H772 168 aa16.71■□□□□ 0.27
CCDC130-211ENST00000589669 GPRC5DQ9NZD1 345 aa16.71■□□□□ 0.27
CCDC130-211ENST00000589669 ANKIB1Q9P2G1 1089 aa16.71■□□□□ 0.27
CCDC130-211ENST00000589669 PASKQ96RG2 1323 aa16.7■□□□□ 0.26
CCDC130-211ENST00000589669 RAD17O75943 681 aa16.7■□□□□ 0.26
CCDC130-211ENST00000589669 MDM2Q00987 491 aaPredicted RBP16.7■□□□□ 0.26
CCDC130-211ENST00000589669 TRMT2AQ8IZ69 625 aaKnown RBP16.7■□□□□ 0.26
CCDC130-211ENST00000589669 REPIN1Q9BWE0 567 aaKnown RBP16.7■□□□□ 0.26
CCDC130-211ENST00000589669 GGA1Q9UJY5 639 aa16.7■□□□□ 0.26
CCDC130-211ENST00000589669 RCCD1A6NED2 376 aa16.69■□□□□ 0.26
CCDC130-211ENST00000589669 POTEMA6NI47 508 aa16.69■□□□□ 0.26
CCDC130-211ENST00000589669 ADGRD1Q6QNK2 874 aa16.69■□□□□ 0.26
CCDC130-211ENST00000589669 CNTROBQ8N137 903 aa16.69■□□□□ 0.26
CCDC130-211ENST00000589669 JMYQ8N9B5 988 aa16.69■□□□□ 0.26
CCDC130-211ENST00000589669 KDM4CQ9H3R0 1056 aa16.69■□□□□ 0.26
CCDC130-211ENST00000589669 ADARB2Q9NS39 739 aaKnown RBP16.69■□□□□ 0.26
CCDC130-211ENST00000589669 SEPT9Q9UHD8 586 aaPredicted RBP16.69■□□□□ 0.26
CCDC130-211ENST00000589669 MINPP1Q9UNW1 487 aa16.69■□□□□ 0.26
CCDC130-211ENST00000589669 TAF1P21675 1872 aa16.69■□□□□ 0.26
CCDC130-211ENST00000589669 PCNTO95613 3336 aa16.68■□□□□ 0.26
CCDC130-211ENST00000589669 ALDH1L1O75891 902 aa16.68■□□□□ 0.26
CCDC130-211ENST00000589669 ATP2B4P23634 1241 aa16.68■□□□□ 0.26
CCDC130-211ENST00000589669 GMPSP49915 693 aaPredicted RBP16.68■□□□□ 0.26
CCDC130-211ENST00000589669 DPF2Q92785 391 aa16.68■□□□□ 0.26
CCDC130-211ENST00000589669 TMUB1Q9BVT8 246 aa16.68■□□□□ 0.26
CCDC130-211ENST00000589669 KRTAP3-3Q9BYR6 98 aa16.68■□□□□ 0.26
CCDC130-211ENST00000589669 KRTAP3-2Q9BYR7 98 aa16.68■□□□□ 0.26
CCDC130-211ENST00000589669 DBNDD1Q9H9R9 158 aa16.68■□□□□ 0.26
CCDC130-211ENST00000589669 XDHP47989 1333 aa16.68■□□□□ 0.26
CCDC130-211ENST00000589669 CACNA1FO60840 1977 aa16.68■□□□□ 0.26
CCDC130-211ENST00000589669 COL4A1P02462 1669 aa16.67■□□□□ 0.26
CCDC130-211ENST00000589669 UFL1O94874 794 aa16.67■□□□□ 0.26
CCDC130-211ENST00000589669 MAP1SQ66K74 1059 aaPredicted RBP16.67■□□□□ 0.26
CCDC130-211ENST00000589669 MRPL50Q8N5N7 158 aaKnown RBP16.67■□□□□ 0.26
CCDC130-211ENST00000589669 BCL2L13Q9BXK5 485 aa16.67■□□□□ 0.26
CCDC130-211ENST00000589669 PGAP2Q9UHJ9 254 aa16.67■□□□□ 0.26
CCDC130-211ENST00000589669 CNOT7Q9UIV1 285 aaKnown RBP16.67■□□□□ 0.26
CCDC130-211ENST00000589669 DUOX1Q9NRD9 1551 aa16.67■□□□□ 0.26
CCDC130-211ENST00000589669 LRRC37AA6NMS7 1700 aa16.66■□□□□ 0.26
CCDC130-211ENST00000589669 ECE2O60344 883 aa16.66■□□□□ 0.26
CCDC130-211ENST00000589669 ITGA6P23229 1130 aa16.66■□□□□ 0.26
CCDC130-211ENST00000589669 CLCN1P35523 988 aa16.66■□□□□ 0.26
CCDC130-211ENST00000589669 IGHMBP2P38935 993 aaKnown RBP16.66■□□□□ 0.26
CCDC130-211ENST00000589669 FOXO4P98177 505 aa16.66■□□□□ 0.26
CCDC130-211ENST00000589669 GPCPD1Q9NPB8 672 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms