RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 KRT85P78386 507 aa18.04■□□□□ 0.48
MBD1-217ENST00000588937 UBE3CQ15386 1083 aa18.04■□□□□ 0.48
MBD1-217ENST00000588937 GPAA1O43292 621 aa18.04■□□□□ 0.48
MBD1-217ENST00000588937 HMGN5P82970 282 aaKnown RBP18.04■□□□□ 0.48
MBD1-217ENST00000588937 FAM177BA6PVY3 158 aa18.03■□□□□ 0.48
MBD1-217ENST00000588937 FIBPO43427 364 aa18.03■□□□□ 0.48
MBD1-217ENST00000588937 DNM1Q05193 864 aaKnown RBP18.03■□□□□ 0.48
MBD1-217ENST00000588937 FAM196AQ6ZSG2 479 aa18.03■□□□□ 0.48
MBD1-217ENST00000588937 ZNF274Q96GC6 653 aaPredicted RBP18.03■□□□□ 0.48
MBD1-217ENST00000588937 BCL11BQ9C0K0 894 aaPredicted RBP18.03■□□□□ 0.48
MBD1-217ENST00000588937 PUS7LQ9H0K6 701 aaKnown RBP18.03■□□□□ 0.48
MBD1-217ENST00000588937 FGAP02671 866 aa18.02■□□□□ 0.48
MBD1-217ENST00000588937 PHKA1P46020 1223 aa18.02■□□□□ 0.48
MBD1-217ENST00000588937 CCDC183Q5T5S1 534 aa18.02■□□□□ 0.48
MBD1-217ENST00000588937 SLC9C2Q5TAH2 1124 aa18.02■□□□□ 0.48
MBD1-217ENST00000588937 PI16Q6UXB8 463 aa18.02■□□□□ 0.48
MBD1-217ENST00000588937 CDC37L1Q7L3B6 337 aa18.02■□□□□ 0.48
MBD1-217ENST00000588937 KRT27Q7Z3Y8 459 aa18.02■□□□□ 0.48
MBD1-217ENST00000588937 FAM184AQ8NB25 1140 aa18.02■□□□□ 0.48
MBD1-217ENST00000588937 CNTNAP4Q9C0A0 1308 aa18.02■□□□□ 0.48
MBD1-217ENST00000588937 TAF1LQ8IZX4 1826 aa18.02■□□□□ 0.47
MBD1-217ENST00000588937 ZNF213O14771 459 aa18.02■□□□□ 0.47
MBD1-217ENST00000588937 SCRN1Q12765 414 aa18.02■□□□□ 0.47
MBD1-217ENST00000588937 SMARCC2Q8TAQ2 1214 aa18.02■□□□□ 0.47
MBD1-217ENST00000588937 TRIM44Q96DX7 344 aaPredicted RBP18.02■□□□□ 0.47
MBD1-217ENST00000588937 CDC5LQ99459 802 aaKnown RBP18.02■□□□□ 0.47
MBD1-217ENST00000588937 LRRC2Q9BYS8 371 aa18.02■□□□□ 0.47
MBD1-217ENST00000588937 RGS17Q9UGC6 210 aaPredicted RBP18.02■□□□□ 0.47
MBD1-217ENST00000588937 IDH1O75874 414 aaKnown RBP18.01■□□□□ 0.47
MBD1-217ENST00000588937 RC3H1Q5TC82 1133 aaKnown RBP18.01■□□□□ 0.47
MBD1-217ENST00000588937 TTLL5Q6EMB2 1281 aa18.01■□□□□ 0.47
MBD1-217ENST00000588937 PTF1AQ7RTS3 328 aa18.01■□□□□ 0.47
MBD1-217ENST00000588937 RBSNQ9H1K0 784 aa18.01■□□□□ 0.47
MBD1-217ENST00000588937 ELP1O95163 1332 aa18.01■□□□□ 0.47
MBD1-217ENST00000588937 WDR19Q8NEZ3 1342 aa18.01■□□□□ 0.47
MBD1-217ENST00000588937 H3BQV1 296 aa18■□□□□ 0.47
MBD1-217ENST00000588937 IFFO2Q5TF58 517 aa18■□□□□ 0.47
MBD1-217ENST00000588937 SPATA5Q8NB90 893 aa18■□□□□ 0.47
MBD1-217ENST00000588937 HELBQ8NG08 1087 aaPredicted RBP18■□□□□ 0.47
MBD1-217ENST00000588937 NCOA7Q8NI08 942 aa18■□□□□ 0.47
MBD1-217ENST00000588937 PPP1R9BQ96SB3 815 aa18■□□□□ 0.47
MBD1-217ENST00000588937 SCAND2PQ9GZW5 306 aaPredicted RBP18■□□□□ 0.47
MBD1-217ENST00000588937 TSPY26PQ9H489 355 aa18■□□□□ 0.47
MBD1-217ENST00000588937 ZSCAN16Q9H4T2 348 aaPredicted RBP18■□□□□ 0.47
MBD1-217ENST00000588937 PIH1D3Q9NQM4 214 aaKnown RBP18■□□□□ 0.47
MBD1-217ENST00000588937 SEC31BQ9NQW1 1179 aa18■□□□□ 0.47
MBD1-217ENST00000588937 FOXP2O15409 715 aa17.99■□□□□ 0.47
MBD1-217ENST00000588937 JAK2O60674 1132 aa17.99■□□□□ 0.47
MBD1-217ENST00000588937 MCM5P33992 734 aa17.99■□□□□ 0.47
MBD1-217ENST00000588937 EVCP57679 992 aa17.99■□□□□ 0.47
MBD1-217ENST00000588937 APOBRQ0VD83 1088 aa17.99■□□□□ 0.47
MBD1-217ENST00000588937 MAP3K12Q12852 859 aa17.99■□□□□ 0.47
MBD1-217ENST00000588937 FAM182BQ5T319 152 aa17.99■□□□□ 0.47
MBD1-217ENST00000588937 RALYLQ86SE5 291 aaKnown RBP17.99■□□□□ 0.47
MBD1-217ENST00000588937 LINC00116Q8NCU8 138 aa17.99■□□□□ 0.47
MBD1-217ENST00000588937 PDE6AP16499 860 aa17.99■□□□□ 0.47
MBD1-217ENST00000588937 NSUN7Q8NE18 718 aaKnown RBP17.99■□□□□ 0.47
MBD1-217ENST00000588937 RTN4Q9NQC3 1192 aaKnown RBP17.99■□□□□ 0.47
MBD1-217ENST00000588937 ZNF532Q9HCE3 1301 aa17.99■□□□□ 0.47
MBD1-217ENST00000588937 DOCK2Q92608 1830 aa17.98■□□□□ 0.47
MBD1-217ENST00000588937 A0A0G2JLW4 131 aa17.98■□□□□ 0.47
MBD1-217ENST00000588937 TRDNQ13061 729 aa17.98■□□□□ 0.47
MBD1-217ENST00000588937 SCN7AQ01118 1682 aa17.97■□□□□ 0.47
MBD1-217ENST00000588937 PDIA3P30101 505 aaKnown RBP17.97■□□□□ 0.47
MBD1-217ENST00000588937 HAND2P61296 217 aa17.97■□□□□ 0.47
MBD1-217ENST00000588937 NAA16Q6N069 864 aaPredicted RBP17.97■□□□□ 0.47
MBD1-217ENST00000588937 FERMT3Q86UX7 667 aa17.97■□□□□ 0.47
MBD1-217ENST00000588937 TCRBV5S4A2TA0A5A2 114 aa17.96■□□□□ 0.47
MBD1-217ENST00000588937 DHX16O60231 1041 aaKnown RBP17.96■□□□□ 0.47
MBD1-217ENST00000588937 DTNBO60941 627 aa17.96■□□□□ 0.47
MBD1-217ENST00000588937 RXRBP28702 533 aa17.96■□□□□ 0.47
MBD1-217ENST00000588937 SF3B3Q15393 1217 aaKnown RBP17.96■□□□□ 0.47
MBD1-217ENST00000588937 POTEAQ6S8J7 498 aa17.96■□□□□ 0.47
MBD1-217ENST00000588937 MB21D2Q8IYB1 491 aaPredicted RBP17.96■□□□□ 0.47
MBD1-217ENST00000588937 AIDAQ96BJ3 306 aa17.96■□□□□ 0.47
MBD1-217ENST00000588937 ZMYM6O95789 1325 aa17.96■□□□□ 0.47
MBD1-217ENST00000588937 MYO5AQ9Y4I1 1855 aaKnown RBP17.96■□□□□ 0.47
MBD1-217ENST00000588937 PTPDC1A2A3K4 754 aa17.96■□□□□ 0.47
MBD1-217ENST00000588937 PRC1O43663 620 aa17.96■□□□□ 0.47
MBD1-217ENST00000588937 CHRNDQ07001 517 aa17.96■□□□□ 0.47
MBD1-217ENST00000588937 ALX1Q15699 326 aa17.96■□□□□ 0.47
MBD1-217ENST00000588937 ANKRD18AQ8IVF6 992 aa17.96■□□□□ 0.47
MBD1-217ENST00000588937 DDX11Q96FC9 970 aa17.96■□□□□ 0.47
MBD1-217ENST00000588937 NYXQ9GZU5 481 aa17.96■□□□□ 0.47
MBD1-217ENST00000588937 NAP1L2Q9ULW6 460 aaPredicted RBP17.96■□□□□ 0.47
MBD1-217ENST00000588937 APPP05067 770 aa17.95■□□□□ 0.46
MBD1-217ENST00000588937 RASGRF1Q13972 1273 aa17.95■□□□□ 0.46
MBD1-217ENST00000588937 CFAP45Q9UL16 551 aa17.95■□□□□ 0.46
MBD1-217ENST00000588937 WWC3Q9ULE0 1092 aa17.95■□□□□ 0.46
MBD1-217ENST00000588937 HMGB2P26583 209 aaKnown RBP17.94■□□□□ 0.46
MBD1-217ENST00000588937 CCT2P78371 535 aaKnown RBP17.94■□□□□ 0.46
MBD1-217ENST00000588937 RESTQ13127 1097 aa17.94■□□□□ 0.46
MBD1-217ENST00000588937 ERFEQ4G0M1 354 aa17.94■□□□□ 0.46
MBD1-217ENST00000588937 SLC10A5Q5PT55 438 aa17.94■□□□□ 0.46
MBD1-217ENST00000588937 CHST3Q7LGC8 479 aa17.94■□□□□ 0.46
MBD1-217ENST00000588937 TTC6Q86TZ1 520 aa17.94■□□□□ 0.46
MBD1-217ENST00000588937 SPATA32Q96LK8 384 aa17.94■□□□□ 0.46
MBD1-217ENST00000588937 STRBPQ96SI9 672 aaKnown RBP17.94■□□□□ 0.46
MBD1-217ENST00000588937 SALL1Q9NSC2 1324 aa17.94■□□□□ 0.46
MBD1-217ENST00000588937 GOLGA6L4A6NEF3 574 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms