RNA–Protein interactions for RNA: ENST00000587700.1

RFX2-209, Transcript of regulatory factor X2, human

TSL 2

Gene RFX2, Length 2,376 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-209	ENST00000587700	CKAP2L	Q8IYA6	745 aa		10.84	□□□□□ -0.67
RFX2-209	ENST00000587700	PGBD1	Q96JS3	809 aa		10.84	□□□□□ -0.67
RFX2-209	ENST00000587700	MARCH6	O60337	910 aa		10.84	□□□□□ -0.67
RFX2-209	ENST00000587700	CACNB1	Q02641	598 aa	Predicted RBP	10.84	□□□□□ -0.67
RFX2-209	ENST00000587700	ZCRB1	Q8TBF4	217 aa	Known RBP	10.84	□□□□□ -0.67
RFX2-209	ENST00000587700	BICD2	Q8TD16	824 aa		10.84	□□□□□ -0.67
RFX2-209	ENST00000587700	LLPH	Q9BRT6	129 aa	Known RBP	10.84	□□□□□ -0.67
RFX2-209	ENST00000587700	TFIP11	Q9UBB9	837 aa	Known RBP	10.84	□□□□□ -0.67
RFX2-209	ENST00000587700	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.84	□□□□□ -0.67
RFX2-209	ENST00000587700	RIPOR2	Q9Y4F9	1068 aa		10.84	□□□□□ -0.67
RFX2-209	ENST00000587700	CPD	O75976	1380 aa		10.84	□□□□□ -0.67
RFX2-209	ENST00000587700	RBM47	A0AV96	593 aa	Known RBP	10.83	□□□□□ -0.68
RFX2-209	ENST00000587700	CBX1	P83916	185 aa		10.83	□□□□□ -0.68
RFX2-209	ENST00000587700	ATL3	Q6DD88	541 aa		10.83	□□□□□ -0.68
RFX2-209	ENST00000587700	MRRF	Q96E11	262 aa	Known RBP	10.83	□□□□□ -0.68
RFX2-209	ENST00000587700	MRFAP1L1	Q96HT8	127 aa		10.83	□□□□□ -0.68
RFX2-209	ENST00000587700	ZBTB3	Q9H5J0	574 aa		10.83	□□□□□ -0.68
RFX2-209	ENST00000587700	PRDM10	Q9NQV6	1147 aa		10.83	□□□□□ -0.68
RFX2-209	ENST00000587700	CHMP3	Q9Y3E7	222 aa		10.83	□□□□□ -0.68
RFX2-209	ENST00000587700	TAF6L	Q9Y6J9	622 aa		10.83	□□□□□ -0.68
RFX2-209	ENST00000587700	WDR17	Q8IZU2	1322 aa		10.83	□□□□□ -0.68
RFX2-209	ENST00000587700	NR1I2	O75469	434 aa		10.83	□□□□□ -0.68
RFX2-209	ENST00000587700	KIF20A	O95235	890 aa		10.83	□□□□□ -0.68
RFX2-209	ENST00000587700	TNNT1	P13805	278 aa		10.83	□□□□□ -0.68
RFX2-209	ENST00000587700	ATP5J	P18859	108 aa		10.83	□□□□□ -0.68
RFX2-209	ENST00000587700	PTPN12	Q05209	780 aa	Known RBP	10.83	□□□□□ -0.68
RFX2-209	ENST00000587700	NCBP1	Q09161	790 aa	Known RBP	10.83	□□□□□ -0.68
RFX2-209	ENST00000587700	TFCP2	Q12800	502 aa		10.83	□□□□□ -0.68
RFX2-209	ENST00000587700	DRC1	Q96MC2	740 aa		10.83	□□□□□ -0.68
RFX2-209	ENST00000587700	FAM177B	A6PVY3	158 aa		10.82	□□□□□ -0.68
RFX2-209	ENST00000587700	LRMP	Q12912	555 aa		10.82	□□□□□ -0.68
RFX2-209	ENST00000587700	NAA16	Q6N069	864 aa	Predicted RBP	10.82	□□□□□ -0.68
RFX2-209	ENST00000587700	SMARCC2	Q8TAQ2	1214 aa		10.82	□□□□□ -0.68
RFX2-209	ENST00000587700	BRF1	Q92994	677 aa		10.82	□□□□□ -0.68
RFX2-209	ENST00000587700	NEK1	Q96PY6	1258 aa		10.82	□□□□□ -0.68
RFX2-209	ENST00000587700	OGFR	Q9NZT2	677 aa		10.82	□□□□□ -0.68
RFX2-209	ENST00000587700	CLIP2	Q9UDT6	1046 aa		10.82	□□□□□ -0.68
RFX2-209	ENST00000587700	DBNL	Q9UJU6	430 aa	Known RBP	10.82	□□□□□ -0.68
RFX2-209	ENST00000587700	ZC3H4	Q9UPT8	1303 aa	Known RBP	10.82	□□□□□ -0.68
RFX2-209	ENST00000587700	RFX5	P48382	616 aa	Predicted RBP	10.82	□□□□□ -0.68
RFX2-209	ENST00000587700	RBM6	P78332	1123 aa	Known RBP	10.82	□□□□□ -0.68
RFX2-209	ENST00000587700	IQCB1	Q15051	598 aa		10.82	□□□□□ -0.68
RFX2-209	ENST00000587700	STX1A	Q16623	288 aa		10.82	□□□□□ -0.68
RFX2-209	ENST00000587700	LMBR1L	Q6UX01	489 aa		10.82	□□□□□ -0.68
RFX2-209	ENST00000587700	ZNF589	Q86UQ0	364 aa	Predicted RBP	10.82	□□□□□ -0.68
RFX2-209	ENST00000587700	TCEANC2	Q96MN5	208 aa		10.82	□□□□□ -0.68
RFX2-209	ENST00000587700	DNAJC25	Q9H1X3	360 aa		10.82	□□□□□ -0.68
RFX2-209	ENST00000587700	GOPC	Q9HD26	462 aa		10.82	□□□□□ -0.68
RFX2-209	ENST00000587700	CGN	Q9P2M7	1197 aa	Known RBP	10.82	□□□□□ -0.68
RFX2-209	ENST00000587700	NRBP1	Q9UHY1	535 aa		10.82	□□□□□ -0.68
RFX2-209	ENST00000587700	CLEC11A	Q9Y240	323 aa		10.82	□□□□□ -0.68
RFX2-209	ENST00000587700	COL15A1	P39059	1388 aa		10.81	□□□□□ -0.68
RFX2-209	ENST00000587700	PCDH11X	Q9BZA7	1347 aa		10.81	□□□□□ -0.68
RFX2-209	ENST00000587700	PCDH11Y	Q9BZA8	1340 aa		10.81	□□□□□ -0.68
RFX2-209	ENST00000587700	ANKRD62	A6NC57	917 aa		10.81	□□□□□ -0.68
RFX2-209	ENST00000587700	GOLGA6L19	H0YKK7	550 aa		10.81	□□□□□ -0.68
RFX2-209	ENST00000587700	CCDC112	Q8NEF3	446 aa		10.81	□□□□□ -0.68
RFX2-209	ENST00000587700	CACTIN	Q8WUQ7	758 aa	Known RBP	10.81	□□□□□ -0.68
RFX2-209	ENST00000587700	COPRS	Q9NQ92	184 aa		10.81	□□□□□ -0.68
RFX2-209	ENST00000587700	KCND1	Q9NSA2	647 aa		10.81	□□□□□ -0.68
RFX2-209	ENST00000587700	RCOR1	Q9UKL0	485 aa		10.81	□□□□□ -0.68
RFX2-209	ENST00000587700	SOS2	Q07890	1332 aa	Predicted RBP	10.81	□□□□□ -0.68
RFX2-209	ENST00000587700		H3BQV1	296 aa		10.81	□□□□□ -0.68
RFX2-209	ENST00000587700	SLFNL1	Q499Z3	407 aa		10.81	□□□□□ -0.68
RFX2-209	ENST00000587700	PARP9	Q8IXQ6	854 aa		10.81	□□□□□ -0.68
RFX2-209	ENST00000587700	PLBD2	Q8NHP8	589 aa		10.81	□□□□□ -0.68
RFX2-209	ENST00000587700	CHMP4C	Q96CF2	233 aa		10.81	□□□□□ -0.68
RFX2-209	ENST00000587700	C16orf45	Q96MC5	204 aa	Predicted RBP	10.81	□□□□□ -0.68
RFX2-209	ENST00000587700	XIRP1	Q702N8	1843 aa	Known RBP	10.81	□□□□□ -0.68
RFX2-209	ENST00000587700	COL5A2	P05997	1499 aa	Predicted RBP	10.8	□□□□□ -0.68
RFX2-209	ENST00000587700	JAK2	O60674	1132 aa		10.8	□□□□□ -0.68
RFX2-209	ENST00000587700	PFKFB2	O60825	505 aa		10.8	□□□□□ -0.68
RFX2-209	ENST00000587700	IL2RB	P14784	551 aa		10.8	□□□□□ -0.68
RFX2-209	ENST00000587700	MLLT3	P42568	568 aa	Predicted RBP	10.8	□□□□□ -0.68
RFX2-209	ENST00000587700	CASP7	P55210	303 aa		10.8	□□□□□ -0.68
RFX2-209	ENST00000587700	EVA1C	P58658	441 aa		10.8	□□□□□ -0.68
RFX2-209	ENST00000587700	STK3	Q13188	491 aa		10.8	□□□□□ -0.68
RFX2-209	ENST00000587700	TPD52L1	Q16890	204 aa	Predicted RBP	10.8	□□□□□ -0.68
RFX2-209	ENST00000587700	LRRC8A	Q8IWT6	810 aa		10.8	□□□□□ -0.68
RFX2-209	ENST00000587700	DBNDD2	Q9BQY9	259 aa		10.8	□□□□□ -0.68
RFX2-209	ENST00000587700	U2AF2	P26368	475 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
RFX2-209	ENST00000587700	ADD1	P35611	737 aa	Known RBP	10.8	□□□□□ -0.68
RFX2-209	ENST00000587700	TNNI3K	Q59H18	835 aa		10.8	□□□□□ -0.68
RFX2-209	ENST00000587700	ZNF662	Q6ZS27	426 aa		10.8	□□□□□ -0.68
RFX2-209	ENST00000587700		Q6ZUG5	572 aa		10.8	□□□□□ -0.68
RFX2-209	ENST00000587700	ZNF594	Q96JF6	807 aa	Predicted RBP	10.8	□□□□□ -0.68
RFX2-209	ENST00000587700	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.8	□□□□□ -0.68
RFX2-209	ENST00000587700	DNAJC2	Q99543	621 aa	Known RBP	10.8	□□□□□ -0.68
RFX2-209	ENST00000587700	CTNNA3	Q9UI47	895 aa		10.8	□□□□□ -0.68
RFX2-209	ENST00000587700	FPGT-TNNI3K	V9GXZ4	949 aa		10.8	□□□□□ -0.68
RFX2-209	ENST00000587700	GLI3	P10071	1580 aa		10.79	□□□□□ -0.68
RFX2-209	ENST00000587700	CCDC144B	Q3MJ40	725 aa		10.79	□□□□□ -0.68
RFX2-209	ENST00000587700	CCDC144CP	Q8IYA2	1237 aa		10.79	□□□□□ -0.68
RFX2-209	ENST00000587700	ZNF396	Q96N95	335 aa	Predicted RBP	10.79	□□□□□ -0.68
RFX2-209	ENST00000587700	SEC62	Q99442	399 aa	Known RBP	10.79	□□□□□ -0.68
RFX2-209	ENST00000587700	NHSL1	Q5SYE7	1610 aa		10.79	□□□□□ -0.68
RFX2-209	ENST00000587700	FOXO4	P98177	505 aa		10.79	□□□□□ -0.68
RFX2-209	ENST00000587700	GABPB1	Q06547	395 aa	Predicted RBP	10.79	□□□□□ -0.68
RFX2-209	ENST00000587700	SKIV2L	Q15477	1246 aa	Known RBP	10.79	□□□□□ -0.68
RFX2-209	ENST00000587700	RABL6	Q3YEC7	729 aa	Predicted RBP	10.79	□□□□□ -0.68

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