RNA–Protein interactions for RNA: ENST00000587483.5

RUNDC3A-203, Transcript of RUN domain containing 3A, humanhuman

TSL 2

Gene RUNDC3A, Length 3,686 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-203ENST00000587483 SNRPA1P09661 255 aaKnown RBP12.95□□□□□ -0.34
RUNDC3A-203ENST00000587483 CDC25BP30305 580 aa12.95□□□□□ -0.34
RUNDC3A-203ENST00000587483 SNW1Q13573 536 aaKnown RBP12.95□□□□□ -0.34
RUNDC3A-203ENST00000587483 CCDC57Q2TAC2 916 aa12.95□□□□□ -0.34
RUNDC3A-203ENST00000587483 ZSWIM4Q9H7M6 989 aa12.95□□□□□ -0.34
RUNDC3A-203ENST00000587483 PAXBP1Q9Y5B6 917 aa12.95□□□□□ -0.34
RUNDC3A-203ENST00000587483 CAVIN2O95810 425 aa12.94□□□□□ -0.34
RUNDC3A-203ENST00000587483 AIFM3Q96NN9 605 aa12.94□□□□□ -0.34
RUNDC3A-203ENST00000587483 CLIC4Q9Y696 253 aa12.94□□□□□ -0.34
RUNDC3A-203ENST00000587483 E7EWF7 191 aa12.94□□□□□ -0.34
RUNDC3A-203ENST00000587483 SLC3A2P08195 630 aaKnown RBP12.94□□□□□ -0.34
RUNDC3A-203ENST00000587483 SARM1Q6SZW1 724 aa12.94□□□□□ -0.34
RUNDC3A-203ENST00000587483 HAUS7Q99871 368 aa12.94□□□□□ -0.34
RUNDC3A-203ENST00000587483 RCOR1Q9UKL0 485 aa12.94□□□□□ -0.34
RUNDC3A-203ENST00000587483 CCDC158Q5M9N0 1113 aa12.94□□□□□ -0.34
RUNDC3A-203ENST00000587483 HELBQ8NG08 1087 aaPredicted RBP12.94□□□□□ -0.34
RUNDC3A-203ENST00000587483 MRFAP1L1Q96HT8 127 aa12.94□□□□□ -0.34
RUNDC3A-203ENST00000587483 GTPBP4Q9BZE4 634 aaKnown RBP12.94□□□□□ -0.34
RUNDC3A-203ENST00000587483 SFPQP23246 707 aaKnown RBP eCLIP12.93□□□□□ -0.34
RUNDC3A-203ENST00000587483 NDUFA8P51970 172 aa12.93□□□□□ -0.34
RUNDC3A-203ENST00000587483 NAA16Q6N069 864 aaPredicted RBP12.93□□□□□ -0.34
RUNDC3A-203ENST00000587483 DHX40Q8IX18 779 aaKnown RBP12.93□□□□□ -0.34
RUNDC3A-203ENST00000587483 IPO4Q8TEX9 1081 aaKnown RBP12.93□□□□□ -0.34
RUNDC3A-203ENST00000587483 FAM89AQ96GI7 184 aa12.93□□□□□ -0.34
RUNDC3A-203ENST00000587483 PHRF1Q9P1Y6 1649 aaKnown RBP12.93□□□□□ -0.34
RUNDC3A-203ENST00000587483 A0A1B0GUL7 405 aa12.93□□□□□ -0.34
RUNDC3A-203ENST00000587483 POLR3GO15318 223 aaPredicted RBP12.93□□□□□ -0.34
RUNDC3A-203ENST00000587483 URI1O94763 535 aaPredicted RBP12.93□□□□□ -0.34
RUNDC3A-203ENST00000587483 KIF18AQ8NI77 898 aa12.93□□□□□ -0.34
RUNDC3A-203ENST00000587483 PHKBQ93100 1093 aa12.93□□□□□ -0.34
RUNDC3A-203ENST00000587483 LLPHQ9BRT6 129 aaKnown RBP12.93□□□□□ -0.34
RUNDC3A-203ENST00000587483 CTNNA3Q9UI47 895 aa12.93□□□□□ -0.34
RUNDC3A-203ENST00000587483 PCDHA7Q9UN72 937 aa12.93□□□□□ -0.34
RUNDC3A-203ENST00000587483 KDM4FA0A1W2PPD8 638 aa12.93□□□□□ -0.34
RUNDC3A-203ENST00000587483 CTAGE5O15320 804 aa12.93□□□□□ -0.34
RUNDC3A-203ENST00000587483 DPCR1Q3MIW9 517 aa12.93□□□□□ -0.34
RUNDC3A-203ENST00000587483 TOM1L2Q6ZVM7 507 aa12.93□□□□□ -0.34
RUNDC3A-203ENST00000587483 MRPS27Q92552 414 aaKnown RBP12.93□□□□□ -0.34
RUNDC3A-203ENST00000587483 AFDNP55196 1824 aaKnown RBP12.93□□□□□ -0.34
RUNDC3A-203ENST00000587483 PRC1O43663 620 aa12.92□□□□□ -0.34
RUNDC3A-203ENST00000587483 HSPD1P10809 573 aaKnown RBP12.92□□□□□ -0.34
RUNDC3A-203ENST00000587483 KBTBD3Q8NAB2 608 aa12.92□□□□□ -0.34
RUNDC3A-203ENST00000587483 MNS1Q8NEH6 495 aa12.92□□□□□ -0.34
RUNDC3A-203ENST00000587483 SLC52A2Q9HAB3 445 aa12.92□□□□□ -0.34
RUNDC3A-203ENST00000587483 DNAI1Q9UI46 699 aa12.92□□□□□ -0.34
RUNDC3A-203ENST00000587483 ADORA1P30542 326 aa12.92□□□□□ -0.34
RUNDC3A-203ENST00000587483 FAM160A1Q05DH4 1040 aa12.92□□□□□ -0.34
RUNDC3A-203ENST00000587483 IMMTQ16891 758 aaKnown RBP12.92□□□□□ -0.34
RUNDC3A-203ENST00000587483 ILDR1Q86SU0 546 aaPredicted RBP12.92□□□□□ -0.34
RUNDC3A-203ENST00000587483 ENGASEQ8NFI3 743 aa12.92□□□□□ -0.34
RUNDC3A-203ENST00000587483 CPLX3Q8WVH0 158 aa12.92□□□□□ -0.34
RUNDC3A-203ENST00000587483 XPO4Q9C0E2 1151 aaKnown RBP12.92□□□□□ -0.34
RUNDC3A-203ENST00000587483 RGPD5Q99666 1765 aa12.92□□□□□ -0.34
RUNDC3A-203ENST00000587483 IFNL2Q8IZJ0 200 aa12.92□□□□□ -0.34
RUNDC3A-203ENST00000587483 PLCD3Q8N3E9 789 aa12.92□□□□□ -0.34
RUNDC3A-203ENST00000587483 FEZ1Q99689 392 aa12.92□□□□□ -0.34
RUNDC3A-203ENST00000587483 CCZ1BP86790 482 aa12.91□□□□□ -0.34
RUNDC3A-203ENST00000587483 CCZ1P86791 482 aaPredicted RBP12.91□□□□□ -0.34
RUNDC3A-203ENST00000587483 SYCP1Q15431 976 aa12.91□□□□□ -0.34
RUNDC3A-203ENST00000587483 INCENPQ9NQS7 918 aa12.91□□□□□ -0.34
RUNDC3A-203ENST00000587483 CNNM1Q9NRU3 951 aa12.91□□□□□ -0.34
RUNDC3A-203ENST00000587483 KDM6AO15550 1401 aaPredicted RBP12.91□□□□□ -0.34
RUNDC3A-203ENST00000587483 ZNF213O14771 459 aa12.91□□□□□ -0.34
RUNDC3A-203ENST00000587483 HMGB1P09429 215 aaKnown RBP12.91□□□□□ -0.34
RUNDC3A-203ENST00000587483 RBM6P78332 1123 aaKnown RBP12.91□□□□□ -0.34
RUNDC3A-203ENST00000587483 KLHL10Q6JEL2 608 aa12.91□□□□□ -0.34
RUNDC3A-203ENST00000587483 CMTR1Q8N1G2 835 aaKnown RBP12.91□□□□□ -0.34
RUNDC3A-203ENST00000587483 NUP133Q8WUM0 1156 aa12.91□□□□□ -0.34
RUNDC3A-203ENST00000587483 ZKSCAN3Q9BRR0 538 aa12.91□□□□□ -0.34
RUNDC3A-203ENST00000587483 OGFRQ9NZT2 677 aa12.91□□□□□ -0.34
RUNDC3A-203ENST00000587483 RFX7Q2KHR2 1363 aa12.91□□□□□ -0.34
RUNDC3A-203ENST00000587483 SH3TC1Q8TE82 1336 aa12.91□□□□□ -0.34
RUNDC3A-203ENST00000587483 PDIA3P30101 505 aaKnown RBP12.91□□□□□ -0.34
RUNDC3A-203ENST00000587483 TRIM29Q14134 588 aa12.91□□□□□ -0.34
RUNDC3A-203ENST00000587483 ERCC6LQ2NKX8 1250 aa12.91□□□□□ -0.34
RUNDC3A-203ENST00000587483 RABL6Q3YEC7 729 aaPredicted RBP12.91□□□□□ -0.34
RUNDC3A-203ENST00000587483 SYNE4Q8N205 404 aa12.91□□□□□ -0.34
RUNDC3A-203ENST00000587483 MTMR7Q9Y216 660 aa12.91□□□□□ -0.34
RUNDC3A-203ENST00000587483 PES1O00541 588 aaKnown RBP12.9□□□□□ -0.34
RUNDC3A-203ENST00000587483 SPTLC2O15270 562 aa12.9□□□□□ -0.34
RUNDC3A-203ENST00000587483 EXOSC10Q01780 885 aaKnown RBP12.9□□□□□ -0.34
RUNDC3A-203ENST00000587483 NYAP1Q6ZVC0 841 aa12.9□□□□□ -0.34
RUNDC3A-203ENST00000587483 LRP10Q7Z4F1 713 aa12.9□□□□□ -0.34
RUNDC3A-203ENST00000587483 ZFP91Q96JP5 570 aaPredicted RBP12.9□□□□□ -0.34
RUNDC3A-203ENST00000587483 ST7Q9NRC1 585 aa12.9□□□□□ -0.34
RUNDC3A-203ENST00000587483 CWC25Q9NXE8 425 aaPredicted RBP12.9□□□□□ -0.34
RUNDC3A-203ENST00000587483 IQSEC3Q9UPP2 1182 aaPredicted RBP12.9□□□□□ -0.34
RUNDC3A-203ENST00000587483 GTF2E1P29083 439 aaPredicted RBP12.9□□□□□ -0.34
RUNDC3A-203ENST00000587483 SKIDA1Q1XH10 827 aa12.9□□□□□ -0.34
RUNDC3A-203ENST00000587483 METTL24Q5JXM2 366 aa12.9□□□□□ -0.34
RUNDC3A-203ENST00000587483 CLIC6Q96NY7 704 aa12.9□□□□□ -0.34
RUNDC3A-203ENST00000587483 DENND2AQ9ULE3 1009 aa12.9□□□□□ -0.34
RUNDC3A-203ENST00000587483 M0R2C6 588 aa12.9□□□□□ -0.35
RUNDC3A-203ENST00000587483 NEMFO60524 1076 aa12.9□□□□□ -0.35
RUNDC3A-203ENST00000587483 RNF113AO15541 343 aaKnown RBP12.89□□□□□ -0.35
RUNDC3A-203ENST00000587483 ATP1A3P13637 1013 aa12.89□□□□□ -0.35
RUNDC3A-203ENST00000587483 OSBP2Q969R2 916 aa12.89□□□□□ -0.35
RUNDC3A-203ENST00000587483 CARMIL3Q8ND23 1372 aa12.89□□□□□ -0.35
RUNDC3A-203ENST00000587483 ERBB3P21860 1342 aa12.89□□□□□ -0.35
RUNDC3A-203ENST00000587483 SALL1Q9NSC2 1324 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms