RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 DDX3YO15523 660 aaKnown RBP8.13□□□□□ -1.11
VMP1-205ENST00000587470 PDE3BQ13370 1112 aa8.13□□□□□ -1.11
VMP1-205ENST00000587470 KIAA1211Q6ZU35 1233 aa8.13□□□□□ -1.11
VMP1-205ENST00000587470 FOXD4L4Q8WXT5 416 aaPredicted RBP8.13□□□□□ -1.11
VMP1-205ENST00000587470 CITED4Q96RK1 184 aa8.13□□□□□ -1.11
VMP1-205ENST00000587470 BHLHE41Q9C0J9 482 aaPredicted RBP8.13□□□□□ -1.11
VMP1-205ENST00000587470 ADAM11O75078 769 aa8.12□□□□□ -1.11
VMP1-205ENST00000587470 C19orf57Q0VDD7 668 aa8.12□□□□□ -1.11
VMP1-205ENST00000587470 IKBKEQ14164 716 aa8.12□□□□□ -1.11
VMP1-205ENST00000587470 VN1R5Q7Z5H4 357 aa8.12□□□□□ -1.11
VMP1-205ENST00000587470 SLC51AQ86UW1 340 aa8.12□□□□□ -1.11
VMP1-205ENST00000587470 ASAP3Q8TDY4 903 aa8.12□□□□□ -1.11
VMP1-205ENST00000587470 SLC7A3Q8WY07 619 aa8.12□□□□□ -1.11
VMP1-205ENST00000587470 UBL7Q96S82 380 aaPredicted RBP8.12□□□□□ -1.11
VMP1-205ENST00000587470 LATS2Q9NRM7 1088 aa8.12□□□□□ -1.11
VMP1-205ENST00000587470 SOX1O00570 391 aaPredicted RBP8.11□□□□□ -1.11
VMP1-205ENST00000587470 POLR3DP05423 398 aaPredicted RBP8.11□□□□□ -1.11
VMP1-205ENST00000587470 KRTAP19-1Q8IUB9 90 aa8.11□□□□□ -1.11
VMP1-205ENST00000587470 GALNT12Q8IXK2 581 aa8.11□□□□□ -1.11
VMP1-205ENST00000587470 NLRP12P59046 1061 aa8.1□□□□□ -1.11
VMP1-205ENST00000587470 UVSSAQ2YD98 709 aa8.1□□□□□ -1.11
VMP1-205ENST00000587470 NBPF11Q86T75 865 aa8.1□□□□□ -1.11
VMP1-205ENST00000587470 UBASH3BQ8TF42 649 aa8.1□□□□□ -1.11
VMP1-205ENST00000587470 LCE3BQ5TA77 95 aa8.09□□□□□ -1.11
VMP1-205ENST00000587470 HGSNATQ68CP4 663 aa8.09□□□□□ -1.11
VMP1-205ENST00000587470 FAM129BQ96TA1 746 aa8.09□□□□□ -1.11
VMP1-205ENST00000587470 RNF208Q9H0X6 261 aa8.09□□□□□ -1.11
VMP1-205ENST00000587470 SOX17Q9H6I2 414 aaPredicted RBP8.09□□□□□ -1.11
VMP1-205ENST00000587470 RAXQ9Y2V3 346 aa8.09□□□□□ -1.11
VMP1-205ENST00000587470 A0A1W2PP55 124 aa8.08□□□□□ -1.12
VMP1-205ENST00000587470 DHX15O43143 795 aaKnown RBP8.08□□□□□ -1.12
VMP1-205ENST00000587470 EIF4EBP3O60516 100 aaPredicted RBP8.08□□□□□ -1.12
VMP1-205ENST00000587470 CCNJLQ8IV13 435 aa8.08□□□□□ -1.12
VMP1-205ENST00000587470 FAM46AQ96IP4 442 aaKnown RBP8.08□□□□□ -1.12
VMP1-205ENST00000587470 STOML1Q9UBI4 398 aa8.08□□□□□ -1.12
VMP1-205ENST00000587470 CPNE3O75131 537 aaKnown RBP8.07□□□□□ -1.12
VMP1-205ENST00000587470 ESRRAP11474 423 aaPredicted RBP8.07□□□□□ -1.12
VMP1-205ENST00000587470 FSTP19883 344 aa8.07□□□□□ -1.12
VMP1-205ENST00000587470 ANKRD34AQ69YU3 496 aa8.07□□□□□ -1.12
VMP1-205ENST00000587470 ARMC10Q8N2F6 343 aa8.07□□□□□ -1.12
VMP1-205ENST00000587470 TMC1Q8TDI8 760 aa8.07□□□□□ -1.12
VMP1-205ENST00000587470 RUSC1Q9BVN2 902 aa8.07□□□□□ -1.12
VMP1-205ENST00000587470 GNEQ9Y223 722 aaKnown RBP8.07□□□□□ -1.12
VMP1-205ENST00000587470 A0A096LPE4 126 aa8.06□□□□□ -1.12
VMP1-205ENST00000587470 A0A1W2PPZ6 126 aa8.06□□□□□ -1.12
VMP1-205ENST00000587470 MEGF11A6BM72 1044 aa8.06□□□□□ -1.12
VMP1-205ENST00000587470 METTL12A8MUP2 240 aa8.06□□□□□ -1.12
VMP1-205ENST00000587470 BRD1O95696 1058 aa8.06□□□□□ -1.12
VMP1-205ENST00000587470 ORC1Q13415 861 aa8.06□□□□□ -1.12
VMP1-205ENST00000587470 KIAA0319Q5VV43 1072 aa8.06□□□□□ -1.12
VMP1-205ENST00000587470 USPL1Q5W0Q7 1092 aa8.06□□□□□ -1.12
VMP1-205ENST00000587470 UTP4Q969X6 686 aaKnown RBP8.06□□□□□ -1.12
VMP1-205ENST00000587470 TCF12Q99081 682 aa8.06□□□□□ -1.12
VMP1-205ENST00000587470 LIN7BQ9HAP6 207 aa8.06□□□□□ -1.12
VMP1-205ENST00000587470 SOWAHDA6NJG2 315 aa8.05□□□□□ -1.12
VMP1-205ENST00000587470 GSC2O15499 205 aa8.05□□□□□ -1.12
VMP1-205ENST00000587470 SART1O43290 800 aaKnown RBP8.05□□□□□ -1.12
VMP1-205ENST00000587470 MYRFLQ96LU7 910 aa8.05□□□□□ -1.12
VMP1-205ENST00000587470 RBCK1Q9BYM8 510 aa8.05□□□□□ -1.12
VMP1-205ENST00000587470 NIF3L1Q9GZT8 377 aa8.05□□□□□ -1.12
VMP1-205ENST00000587470 DNAJC25Q9H1X3 360 aa8.05□□□□□ -1.12
VMP1-205ENST00000587470 IGHA2P01877 340 aa8.04□□□□□ -1.12
VMP1-205ENST00000587470 GRIA4P48058 902 aa8.04□□□□□ -1.12
VMP1-205ENST00000587470 FDX2Q6P4F2 183 aa8.04□□□□□ -1.12
VMP1-205ENST00000587470 DMRTB1Q96MA1 342 aa8.04□□□□□ -1.12
VMP1-205ENST00000587470 CLEC4MQ9H2X3 399 aaPredicted RBP8.04□□□□□ -1.12
VMP1-205ENST00000587470 EIF1AYO14602 144 aaKnown RBP8.03□□□□□ -1.12
VMP1-205ENST00000587470 GPR182O15218 404 aa8.03□□□□□ -1.12
VMP1-205ENST00000587470 MED26O95402 600 aa8.03□□□□□ -1.12
VMP1-205ENST00000587470 CD97P48960 835 aa8.03□□□□□ -1.12
VMP1-205ENST00000587470 GSTM4Q03013 218 aa8.03□□□□□ -1.12
VMP1-205ENST00000587470 SPRED3Q2MJR0 410 aa8.03□□□□□ -1.12
VMP1-205ENST00000587470 USP26Q9BXU7 913 aa8.03□□□□□ -1.12
VMP1-205ENST00000587470 TMPRSS13Q9BYE2 586 aa8.03□□□□□ -1.12
VMP1-205ENST00000587470 EHD4Q9H223 541 aa8.03□□□□□ -1.12
VMP1-205ENST00000587470 LOC100289279A0A1B0GTE1 492 aa8.02□□□□□ -1.13
VMP1-205ENST00000587470 IGLV1-40P01703 118 aa8.02□□□□□ -1.13
VMP1-205ENST00000587470 PREPP48147 710 aa8.02□□□□□ -1.13
VMP1-205ENST00000587470 PCDH1Q08174 1060 aa8.02□□□□□ -1.13
VMP1-205ENST00000587470 EXOSC6Q5RKV6 272 aaKnown RBP8.02□□□□□ -1.13
VMP1-205ENST00000587470 NUTM2GQ5VZR2 741 aa8.02□□□□□ -1.13
VMP1-205ENST00000587470 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.02□□□□□ -1.13
VMP1-205ENST00000587470 CLEC10AQ8IUN9 316 aa8.02□□□□□ -1.13
VMP1-205ENST00000587470 FAM20CQ8IXL6 584 aa8.02□□□□□ -1.13
VMP1-205ENST00000587470 CCDC74AQ96AQ1 378 aa8.02□□□□□ -1.13
VMP1-205ENST00000587470 ALKBH8Q96BT7 664 aaKnown RBP8.02□□□□□ -1.13
VMP1-205ENST00000587470 SUGCTQ9HAC7 445 aa8.02□□□□□ -1.13
VMP1-205ENST00000587470 CYP4F12Q9HCS2 524 aa8.02□□□□□ -1.13
VMP1-205ENST00000587470 NPHS2Q9NP85 383 aa8.02□□□□□ -1.13
VMP1-205ENST00000587470 HIF3AQ9Y2N7 669 aa8.02□□□□□ -1.13
VMP1-205ENST00000587470 BMP3P12645 472 aa8.01□□□□□ -1.13
VMP1-205ENST00000587470 ZNF423Q2M1K9 1284 aa8.01□□□□□ -1.13
VMP1-205ENST00000587470 C12orf50Q8NA57 414 aaPredicted RBP8.01□□□□□ -1.13
VMP1-205ENST00000587470 SMG8Q8ND04 991 aaKnown RBP8.01□□□□□ -1.13
VMP1-205ENST00000587470 FAM83CQ9BQN1 747 aa8.01□□□□□ -1.13
VMP1-205ENST00000587470 KRTAP9-9Q9BYP9 154 aa8.01□□□□□ -1.13
VMP1-205ENST00000587470 KRTAP9-4Q9BYQ2 154 aa8.01□□□□□ -1.13
VMP1-205ENST00000587470 BIN2Q9UBW5 565 aaPredicted RBP8.01□□□□□ -1.13
VMP1-205ENST00000587470 TRIM42Q8IWZ5 723 aa8□□□□□ -1.13
VMP1-205ENST00000587470 CSRNP1Q96S65 589 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms