RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 TBC1D22AQ8WUA7 517 aa12.93□□□□□ -0.34
SMARCA4-209ENST00000586122 GGA3Q9NZ52 723 aa12.93□□□□□ -0.34
SMARCA4-209ENST00000586122 TRAF5O00463 557 aa12.92□□□□□ -0.34
SMARCA4-209ENST00000586122 SCARF1Q14162 830 aa12.92□□□□□ -0.34
SMARCA4-209ENST00000586122 KIAA0825Q8IV33 1275 aa12.92□□□□□ -0.34
SMARCA4-209ENST00000586122 MTMR14Q8NCE2 650 aa12.92□□□□□ -0.34
SMARCA4-209ENST00000586122 HHIPL1Q96JK4 782 aa12.92□□□□□ -0.34
SMARCA4-209ENST00000586122 SIL1Q9H173 461 aa12.92□□□□□ -0.34
SMARCA4-209ENST00000586122 CHMP4BQ9H444 224 aaKnown RBP12.92□□□□□ -0.34
SMARCA4-209ENST00000586122 RCAN3Q9UKA8 241 aa12.92□□□□□ -0.34
SMARCA4-209ENST00000586122 ABT1Q9ULW3 272 aaKnown RBP12.92□□□□□ -0.34
SMARCA4-209ENST00000586122 TNNQ9UQP3 1299 aa12.92□□□□□ -0.34
SMARCA4-209ENST00000586122 WNT10BO00744 389 aa12.91□□□□□ -0.34
SMARCA4-209ENST00000586122 FRAT2O75474 233 aaPredicted RBP12.91□□□□□ -0.34
SMARCA4-209ENST00000586122 CELF2O95319 508 aaKnown RBP12.91□□□□□ -0.34
SMARCA4-209ENST00000586122 ECE1P42892 770 aa12.91□□□□□ -0.34
SMARCA4-209ENST00000586122 ATP2B3Q16720 1220 aa12.91□□□□□ -0.34
SMARCA4-209ENST00000586122 DEFB115Q30KQ5 88 aa12.91□□□□□ -0.34
SMARCA4-209ENST00000586122 MFSD14BQ5SR56 506 aa12.91□□□□□ -0.34
SMARCA4-209ENST00000586122 ANGEL2Q5VTE6 544 aaKnown RBP12.91□□□□□ -0.34
SMARCA4-209ENST00000586122 CST9Q5W186 159 aa12.91□□□□□ -0.34
SMARCA4-209ENST00000586122 USP48Q86UV5 1035 aa12.91□□□□□ -0.34
SMARCA4-209ENST00000586122 CERS5Q8N5B7 392 aa12.91□□□□□ -0.34
SMARCA4-209ENST00000586122 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.91□□□□□ -0.34
SMARCA4-209ENST00000586122 MXD3Q9BW11 206 aa12.91□□□□□ -0.34
SMARCA4-209ENST00000586122 GNL3LQ9NVN8 582 aaKnown RBP12.91□□□□□ -0.34
SMARCA4-209ENST00000586122 AKAP2Q9Y2D5 859 aa12.91□□□□□ -0.34
SMARCA4-209ENST00000586122 SUGT1Q9Y2Z0 365 aa12.91□□□□□ -0.34
SMARCA4-209ENST00000586122 TLL2Q9Y6L7 1015 aa12.91□□□□□ -0.34
SMARCA4-209ENST00000586122 COL1A1P02452 1464 aaPredicted RBP12.91□□□□□ -0.34
SMARCA4-209ENST00000586122 SEMA3EO15041 775 aa12.9□□□□□ -0.34
SMARCA4-209ENST00000586122 ZBTB7BO15156 539 aaPredicted RBP12.9□□□□□ -0.34
SMARCA4-209ENST00000586122 MYO1BO43795 1136 aa12.9□□□□□ -0.34
SMARCA4-209ENST00000586122 DLGAP5Q15398 846 aa12.9□□□□□ -0.34
SMARCA4-209ENST00000586122 APOBEC3FQ8IUX4 373 aaKnown RBP12.9□□□□□ -0.34
SMARCA4-209ENST00000586122 ZBED3Q96IU2 234 aaPredicted RBP12.9□□□□□ -0.34
SMARCA4-209ENST00000586122 MKRN1Q9UHC7 482 aaKnown RBP12.9□□□□□ -0.34
SMARCA4-209ENST00000586122 MAST3O60307 1309 aa12.89□□□□□ -0.35
SMARCA4-209ENST00000586122 RLBP1P12271 317 aa12.89□□□□□ -0.35
SMARCA4-209ENST00000586122 FKBP1BP68106 108 aa12.89□□□□□ -0.35
SMARCA4-209ENST00000586122 ATP8B2P98198 1209 aa12.89□□□□□ -0.35
SMARCA4-209ENST00000586122 HDLBPQ00341 1268 aaKnown RBP12.89□□□□□ -0.35
SMARCA4-209ENST00000586122 SERPINA10Q9UK55 444 aa12.89□□□□□ -0.35
SMARCA4-209ENST00000586122 DDX19BQ9UMR2 479 aa12.89□□□□□ -0.35
SMARCA4-209ENST00000586122 PA2G4Q9UQ80 394 aaKnown RBP12.89□□□□□ -0.35
SMARCA4-209ENST00000586122 ADM5C9JUS6 153 aa12.88□□□□□ -0.35
SMARCA4-209ENST00000586122 BCAMP50895 628 aa12.88□□□□□ -0.35
SMARCA4-209ENST00000586122 G3BP1Q13283 466 aaKnown RBP eCLIP12.88□□□□□ -0.35
SMARCA4-209ENST00000586122 POLA2Q14181 598 aa12.88□□□□□ -0.35
SMARCA4-209ENST00000586122 NBPF9Q3BBW0 867 aa12.88□□□□□ -0.35
SMARCA4-209ENST00000586122 SAPCD2Q86UD0 394 aa12.88□□□□□ -0.35
SMARCA4-209ENST00000586122 C2orf69Q8N8R5 385 aa12.88□□□□□ -0.35
SMARCA4-209ENST00000586122 WDR66Q8TBY9 1149 aa12.88□□□□□ -0.35
SMARCA4-209ENST00000586122 SSH3Q8TE77 659 aa12.88□□□□□ -0.35
SMARCA4-209ENST00000586122 ZNF408Q9H9D4 720 aa12.88□□□□□ -0.35
SMARCA4-209ENST00000586122 GBA2Q9HCG7 927 aaPredicted RBP12.88□□□□□ -0.35
SMARCA4-209ENST00000586122 TTF2Q9UNY4 1162 aaKnown RBP12.88□□□□□ -0.35
SMARCA4-209ENST00000586122 PPP2R3BQ9Y5P8 575 aa12.88□□□□□ -0.35
SMARCA4-209ENST00000586122 PAPPA2Q9BXP8 1791 aa12.88□□□□□ -0.35
SMARCA4-209ENST00000586122 THSD7BQ9C0I4 1608 aa12.88□□□□□ -0.35
SMARCA4-209ENST00000586122 PNMA6EA0A0J9YXQ4 647 aa12.87□□□□□ -0.35
SMARCA4-209ENST00000586122 SPDYE2BA6NHP3 402 aa12.87□□□□□ -0.35
SMARCA4-209ENST00000586122 SPDYE6P0CI01 402 aa12.87□□□□□ -0.35
SMARCA4-209ENST00000586122 NF2P35240 595 aa12.87□□□□□ -0.35
SMARCA4-209ENST00000586122 FMR1Q06787 632 aaKnown RBP eCLIP12.87□□□□□ -0.351e-7■■□□□ 13.5
SMARCA4-209ENST00000586122 PDE3AQ14432 1141 aa12.87□□□□□ -0.35
SMARCA4-209ENST00000586122 MVPQ14764 893 aaKnown RBP12.87□□□□□ -0.35
SMARCA4-209ENST00000586122 CFAP100Q494V2 611 aa12.87□□□□□ -0.35
SMARCA4-209ENST00000586122 CDCA5Q96FF9 252 aa12.87□□□□□ -0.35
SMARCA4-209ENST00000586122 MRIQ9BWK5 157 aa12.87□□□□□ -0.35
SMARCA4-209ENST00000586122 DENND2AQ9ULE3 1009 aa12.87□□□□□ -0.35
SMARCA4-209ENST00000586122 ASTN2O75129 1339 aaPredicted RBP12.87□□□□□ -0.35
SMARCA4-209ENST00000586122 PDS5AQ29RF7 1337 aaKnown RBP12.87□□□□□ -0.35
SMARCA4-209ENST00000586122 F8W031 263 aaPredicted RBP12.86□□□□□ -0.35
SMARCA4-209ENST00000586122 VEGFBP49765 207 aa12.86□□□□□ -0.35
SMARCA4-209ENST00000586122 CHAF1AQ13111 956 aaPredicted RBP12.86□□□□□ -0.35
SMARCA4-209ENST00000586122 TNFAIP1Q13829 316 aa12.86□□□□□ -0.35
SMARCA4-209ENST00000586122 ZGPATQ8N5A5 531 aaKnown RBP12.86□□□□□ -0.35
SMARCA4-209ENST00000586122 PANK1Q8TE04 598 aa12.86□□□□□ -0.35
SMARCA4-209ENST00000586122 GPR108Q9NPR9 543 aa12.86□□□□□ -0.35
SMARCA4-209ENST00000586122 IQSEC3Q9UPP2 1182 aaPredicted RBP12.86□□□□□ -0.35
SMARCA4-209ENST00000586122 JAG2Q9Y219 1238 aa12.86□□□□□ -0.35
SMARCA4-209ENST00000586122 WDR33Q9C0J8 1336 aaKnown RBP12.86□□□□□ -0.35
SMARCA4-209ENST00000586122 SALL1Q9NSC2 1324 aa12.86□□□□□ -0.35
SMARCA4-209ENST00000586122 A0A1B0GUL7 405 aa12.85□□□□□ -0.35
SMARCA4-209ENST00000586122 MAP2K2P36507 400 aa12.85□□□□□ -0.35
SMARCA4-209ENST00000586122 RBM5P52756 815 aaKnown RBP eCLIP12.85□□□□□ -0.35
SMARCA4-209ENST00000586122 HUNKP57058 714 aa12.85□□□□□ -0.35
SMARCA4-209ENST00000586122 TFCP2Q12800 502 aa12.85□□□□□ -0.35
SMARCA4-209ENST00000586122 TEKT1Q969V4 418 aa12.85□□□□□ -0.35
SMARCA4-209ENST00000586122 CAPNS2Q96L46 248 aa12.85□□□□□ -0.35
SMARCA4-209ENST00000586122 NOP58Q9Y2X3 529 aaKnown RBP12.85□□□□□ -0.35
SMARCA4-209ENST00000586122 CRKP46108 304 aa12.84□□□□□ -0.35
SMARCA4-209ENST00000586122 MAP2K1Q02750 393 aaPredicted RBP12.84□□□□□ -0.35
SMARCA4-209ENST00000586122 OS9Q13438 667 aaPredicted RBP12.84□□□□□ -0.35
SMARCA4-209ENST00000586122 HSP90AB4PQ58FF6 505 aa12.84□□□□□ -0.35
SMARCA4-209ENST00000586122 CCDC102BQ68D86 513 aa12.84□□□□□ -0.35
SMARCA4-209ENST00000586122 CEP85Q6P2H3 762 aa12.84□□□□□ -0.35
SMARCA4-209ENST00000586122 PAXIP1Q6ZW49 1069 aaPredicted RBP12.84□□□□□ -0.35
SMARCA4-209ENST00000586122 RPAP2Q8IXW5 612 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms