RNA–Protein interactions for RNA: ENST00000585843.1

DNMT1-204, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 911 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-204ENST00000585843 ZC3H15Q8WU90 426 aaKnown RBP17.28■□□□□ 0.36
DNMT1-204ENST00000585843 GNL3LQ9NVN8 582 aaKnown RBP17.28■□□□□ 0.36
DNMT1-204ENST00000585843 JAG2Q9Y219 1238 aa17.28■□□□□ 0.36
DNMT1-204ENST00000585843 CEP350Q5VT06 3117 aa17.27■□□□□ 0.36
DNMT1-204ENST00000585843 HMMRO75330 724 aa17.27■□□□□ 0.36
DNMT1-204ENST00000585843 TIMM10P62072 90 aa17.27■□□□□ 0.36
DNMT1-204ENST00000585843 MAP1SQ66K74 1059 aaPredicted RBP17.27■□□□□ 0.36
DNMT1-204ENST00000585843 CNTROBQ8N137 903 aa17.27■□□□□ 0.36
DNMT1-204ENST00000585843 MYOZ2Q9NPC6 264 aa17.27■□□□□ 0.36
DNMT1-204ENST00000585843 HDAC9Q9UKV0 1011 aa17.27■□□□□ 0.36
DNMT1-204ENST00000585843 IQSEC3Q9UPP2 1182 aaPredicted RBP17.27■□□□□ 0.36
DNMT1-204ENST00000585843 A0A1B0GUL7 405 aa17.26■□□□□ 0.35
DNMT1-204ENST00000585843 EGFRP00533 1210 aa17.26■□□□□ 0.35
DNMT1-204ENST00000585843 CHAF1AQ13111 956 aaPredicted RBP17.26■□□□□ 0.35
DNMT1-204ENST00000585843 KIF4BQ2VIQ3 1234 aa17.26■□□□□ 0.35
DNMT1-204ENST00000585843 KIAA0825Q8IV33 1275 aa17.26■□□□□ 0.35
DNMT1-204ENST00000585843 CERS5Q8N5B7 392 aa17.26■□□□□ 0.35
DNMT1-204ENST00000585843 NEUROD6Q96NK8 337 aa17.26■□□□□ 0.35
DNMT1-204ENST00000585843 PGAP2Q9UHJ9 254 aa17.26■□□□□ 0.35
DNMT1-204ENST00000585843 ADAMTSL1Q8N6G6 1762 aa17.25■□□□□ 0.35
DNMT1-204ENST00000585843 ADORA1P30542 326 aa17.25■□□□□ 0.35
DNMT1-204ENST00000585843 HSP90AB4PQ58FF6 505 aa17.25■□□□□ 0.35
DNMT1-204ENST00000585843 MFSD14BQ5SR56 506 aa17.25■□□□□ 0.35
DNMT1-204ENST00000585843 TBC1D22AQ8WUA7 517 aa17.25■□□□□ 0.35
DNMT1-204ENST00000585843 XAGE2Q96GT9 111 aa17.25■□□□□ 0.35
DNMT1-204ENST00000585843 GPR108Q9NPR9 543 aa17.25■□□□□ 0.35
DNMT1-204ENST00000585843 ITGBL1O95965 494 aaPredicted RBP17.24■□□□□ 0.35
DNMT1-204ENST00000585843 APLP1P51693 650 aa17.24■□□□□ 0.35
DNMT1-204ENST00000585843 GORABQ5T7V8 394 aa17.24■□□□□ 0.35
DNMT1-204ENST00000585843 ERC1Q8IUD2 1116 aa17.24■□□□□ 0.35
DNMT1-204ENST00000585843 SIRT2Q8IXJ6 389 aa17.24■□□□□ 0.35
DNMT1-204ENST00000585843 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.24■□□□□ 0.35
DNMT1-204ENST00000585843 F8W031 263 aaPredicted RBP17.23■□□□□ 0.35
DNMT1-204ENST00000585843 SEMA3EO15041 775 aa17.23■□□□□ 0.35
DNMT1-204ENST00000585843 PHKA1P46020 1223 aa17.23■□□□□ 0.35
DNMT1-204ENST00000585843 SCARF1Q14162 830 aa17.23■□□□□ 0.35
DNMT1-204ENST00000585843 CCDC102BQ68D86 513 aa17.23■□□□□ 0.35
DNMT1-204ENST00000585843 EXOC6BQ9Y2D4 811 aa17.23■□□□□ 0.35
DNMT1-204ENST00000585843 ZNF646O15015 1829 aaPredicted RBP17.23■□□□□ 0.35
DNMT1-204ENST00000585843 TNNI3KQ59H18 835 aa17.22■□□□□ 0.35
DNMT1-204ENST00000585843 WDR66Q8TBY9 1149 aa17.22■□□□□ 0.35
DNMT1-204ENST00000585843 DCPSQ96C86 337 aaKnown RBP17.22■□□□□ 0.35
DNMT1-204ENST00000585843 DENND2AQ9ULE3 1009 aa17.22■□□□□ 0.35
DNMT1-204ENST00000585843 FPGT-TNNI3KV9GXZ4 949 aa17.22■□□□□ 0.35
DNMT1-204ENST00000585843 PASKQ96RG2 1323 aa17.21■□□□□ 0.35
DNMT1-204ENST00000585843 DLGAP5Q15398 846 aa17.21■□□□□ 0.35
DNMT1-204ENST00000585843 CDC37L1Q7L3B6 337 aa17.21■□□□□ 0.35
DNMT1-204ENST00000585843 CRBNQ96SW2 442 aa17.21■□□□□ 0.35
DNMT1-204ENST00000585843 TTF2Q9UNY4 1162 aaKnown RBP17.21■□□□□ 0.35
DNMT1-204ENST00000585843 ZBTB22O15209 634 aa17.2■□□□□ 0.34
DNMT1-204ENST00000585843 NBPF9Q3BBW0 867 aa17.2■□□□□ 0.34
DNMT1-204ENST00000585843 KRT26Q7Z3Y9 468 aa17.2■□□□□ 0.34
DNMT1-204ENST00000585843 GLIS2Q9BZE0 524 aaPredicted RBP17.2■□□□□ 0.34
DNMT1-204ENST00000585843 GGA3Q9NZ52 723 aa17.2■□□□□ 0.34
DNMT1-204ENST00000585843 SUGT1Q9Y2Z0 365 aa17.2■□□□□ 0.34
DNMT1-204ENST00000585843 SUPT16HQ9Y5B9 1047 aaKnown RBP17.2■□□□□ 0.34
DNMT1-204ENST00000585843 ASTN2O75129 1339 aaPredicted RBP17.2■□□□□ 0.34
DNMT1-204ENST00000585843 TRAF5O00463 557 aa17.19■□□□□ 0.34
DNMT1-204ENST00000585843 WNT10BO00744 389 aa17.19■□□□□ 0.34
DNMT1-204ENST00000585843 RAB11FIP3O75154 756 aa17.19■□□□□ 0.34
DNMT1-204ENST00000585843 RBM5P52756 815 aaKnown RBP eCLIP17.19■□□□□ 0.349e-13■■■■■ 45.4
DNMT1-204ENST00000585843 ANGEL2Q5VTE6 544 aaKnown RBP17.19■□□□□ 0.34
DNMT1-204ENST00000585843 USP48Q86UV5 1035 aa17.19■□□□□ 0.34
DNMT1-204ENST00000585843 SULF1Q8IWU6 871 aa17.19■□□□□ 0.34
DNMT1-204ENST00000585843 MTMR14Q8NCE2 650 aa17.19■□□□□ 0.34
DNMT1-204ENST00000585843 KIF1BPQ96EK5 621 aa17.19■□□□□ 0.34
DNMT1-204ENST00000585843 SERPINA10Q9UK55 444 aa17.19■□□□□ 0.34
DNMT1-204ENST00000585843 ARAP2Q8WZ64 1704 aa17.18■□□□□ 0.34
DNMT1-204ENST00000585843 APBB1O00213 710 aa17.18■□□□□ 0.34
DNMT1-204ENST00000585843 UQCRFS1P1P0C7P4 283 aa17.18■□□□□ 0.34
DNMT1-204ENST00000585843 RASGRF1Q13972 1273 aa17.18■□□□□ 0.34
DNMT1-204ENST00000585843 GRIK5Q16478 980 aa17.18■□□□□ 0.34
DNMT1-204ENST00000585843 CFAP100Q494V2 611 aa17.18■□□□□ 0.34
DNMT1-204ENST00000585843 CCDC158Q5M9N0 1113 aa17.18■□□□□ 0.34
DNMT1-204ENST00000585843 RHPN1Q8TCX5 695 aa17.18■□□□□ 0.34
DNMT1-204ENST00000585843 ZBED3Q96IU2 234 aaPredicted RBP17.18■□□□□ 0.34
DNMT1-204ENST00000585843 PITPNM2Q9BZ72 1349 aa17.18■□□□□ 0.34
DNMT1-204ENST00000585843 TMEM88BA6NKF7 163 aa17.17■□□□□ 0.34
DNMT1-204ENST00000585843 ZGPATQ8N5A5 531 aaKnown RBP17.17■□□□□ 0.34
DNMT1-204ENST00000585843 EAF2Q96CJ1 260 aaPredicted RBP17.17■□□□□ 0.34
DNMT1-204ENST00000585843 DBNDD2Q9BQY9 259 aa17.17■□□□□ 0.34
DNMT1-204ENST00000585843 COL1A1P02452 1464 aaPredicted RBP17.17■□□□□ 0.34
DNMT1-204ENST00000585843 PDS5AQ29RF7 1337 aaKnown RBP17.17■□□□□ 0.34
DNMT1-204ENST00000585843 SPDYE2BA6NHP3 402 aa17.16■□□□□ 0.34
DNMT1-204ENST00000585843 MYO1BO43795 1136 aa17.16■□□□□ 0.34
DNMT1-204ENST00000585843 SPDYE6P0CI01 402 aa17.16■□□□□ 0.34
DNMT1-204ENST00000585843 ARID4AP29374 1257 aaPredicted RBP17.16■□□□□ 0.34
DNMT1-204ENST00000585843 HTRA3P83110 453 aa17.16■□□□□ 0.34
DNMT1-204ENST00000585843 HDLBPQ00341 1268 aaKnown RBP17.16■□□□□ 0.34
DNMT1-204ENST00000585843 FMR1Q06787 632 aaKnown RBP eCLIP17.16■□□□□ 0.341e-6■■■□□ 15
DNMT1-204ENST00000585843 TTC39AQ5SRH9 613 aa17.16■□□□□ 0.34
DNMT1-204ENST00000585843 AACSQ86V21 672 aa17.16■□□□□ 0.34
DNMT1-204ENST00000585843 CLASRPQ8N2M8 674 aaKnown RBP17.16■□□□□ 0.34
DNMT1-204ENST00000585843 MRIQ9BWK5 157 aa17.16■□□□□ 0.34
DNMT1-204ENST00000585843 CCDC8Q9H0W5 538 aaPredicted RBP17.16■□□□□ 0.34
DNMT1-204ENST00000585843 IL1RAPL2Q9NP60 686 aa17.16■□□□□ 0.34
DNMT1-204ENST00000585843 CREBZFQ9NS37 354 aa17.16■□□□□ 0.34
DNMT1-204ENST00000585843 PCDHB15Q9Y5E8 787 aa17.16■□□□□ 0.34
DNMT1-204ENST00000585843 MAST3O60307 1309 aa17.16■□□□□ 0.34
DNMT1-204ENST00000585843 SALL1Q9NSC2 1324 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms