RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 MYO3BQ8WXR4 1341 aa15.68■□□□□ 0.1
TRIM47-202ENST00000585333 SALL1Q9NSC2 1324 aa15.68■□□□□ 0.1
TRIM47-202ENST00000585333 FER1L6Q2WGJ9 1857 aa15.67■□□□□ 0.1
TRIM47-202ENST00000585333 SNAP23O00161 211 aa15.67■□□□□ 0.1
TRIM47-202ENST00000585333 RIMBP2O15034 1052 aa15.67■□□□□ 0.1
TRIM47-202ENST00000585333 LMNB1P20700 586 aa15.67■□□□□ 0.1
TRIM47-202ENST00000585333 MCAMP43121 646 aa15.67■□□□□ 0.1
TRIM47-202ENST00000585333 MAP3K12Q12852 859 aa15.67■□□□□ 0.1
TRIM47-202ENST00000585333 ARHGAP27Q6ZUM4 889 aa15.67■□□□□ 0.1
TRIM47-202ENST00000585333 SLF2Q8IX21 1173 aa15.67■□□□□ 0.1
TRIM47-202ENST00000585333 RUFY2Q8WXA3 655 aa15.67■□□□□ 0.1
TRIM47-202ENST00000585333 HMG20BQ9P0W2 317 aa15.67■□□□□ 0.1
TRIM47-202ENST00000585333 MAST3O60307 1309 aa15.67■□□□□ 0.1
TRIM47-202ENST00000585333 FAM205AQ6ZU69 1335 aa15.67■□□□□ 0.1
TRIM47-202ENST00000585333 ECE2O60344 883 aa15.66■□□□□ 0.1
TRIM47-202ENST00000585333 AOC3Q16853 763 aa15.66■□□□□ 0.1
TRIM47-202ENST00000585333 STRIP1Q5VSL9 837 aa15.66■□□□□ 0.1
TRIM47-202ENST00000585333 OLFM4Q6UX06 510 aa15.66■□□□□ 0.1
TRIM47-202ENST00000585333 CERS3Q8IU89 383 aa15.66■□□□□ 0.1
TRIM47-202ENST00000585333 KBTBD3Q8NAB2 608 aa15.66■□□□□ 0.1
TRIM47-202ENST00000585333 RILPL2Q969X0 211 aa15.66■□□□□ 0.1
TRIM47-202ENST00000585333 FSD1Q9BTV5 496 aa15.66■□□□□ 0.1
TRIM47-202ENST00000585333 ZNRF3Q9ULT6 936 aa15.66■□□□□ 0.1
TRIM47-202ENST00000585333 NFKBIEO00221 500 aa15.65■□□□□ 0.1
TRIM47-202ENST00000585333 GOLIM4O00461 696 aa15.65■□□□□ 0.1
TRIM47-202ENST00000585333 CDC45O75419 566 aa15.65■□□□□ 0.1
TRIM47-202ENST00000585333 GSTO1P78417 241 aa15.65■□□□□ 0.1
TRIM47-202ENST00000585333 TNIP1Q15025 636 aa15.65■□□□□ 0.1
TRIM47-202ENST00000585333 ZNF277Q9NRM2 450 aaPredicted RBP15.65■□□□□ 0.1
TRIM47-202ENST00000585333 LRP2BPQ9P2M1 347 aa15.65■□□□□ 0.1
TRIM47-202ENST00000585333 ZC3H4Q9UPT8 1303 aaKnown RBP15.65■□□□□ 0.1
TRIM47-202ENST00000585333 USP17L3A6NCW0 530 aa15.64■□□□□ 0.09
TRIM47-202ENST00000585333 USP17L4A6NCW7 530 aa15.64■□□□□ 0.09
TRIM47-202ENST00000585333 SDSP20132 328 aa15.64■□□□□ 0.09
TRIM47-202ENST00000585333 KLRK1P26718 216 aa15.64■□□□□ 0.09
TRIM47-202ENST00000585333 ZAP70P43403 619 aa15.64■□□□□ 0.09
TRIM47-202ENST00000585333 MFAP1P55081 439 aaKnown RBP15.64■□□□□ 0.09
TRIM47-202ENST00000585333 EIF6P56537 245 aaKnown RBP15.64■□□□□ 0.09
TRIM47-202ENST00000585333 TSHZ3Q63HK5 1081 aa15.64■□□□□ 0.09
TRIM47-202ENST00000585333 ERICH6Q7L0X2 663 aa15.64■□□□□ 0.09
TRIM47-202ENST00000585333 USP17L1Q7RTZ2 530 aa15.64■□□□□ 0.09
TRIM47-202ENST00000585333 TXNRD3Q86VQ6 643 aa15.64■□□□□ 0.09
TRIM47-202ENST00000585333 DIAPH3Q9NSV4 1193 aa15.64■□□□□ 0.09
TRIM47-202ENST00000585333 MYH13Q9UKX3 1938 aa15.64■□□□□ 0.09
TRIM47-202ENST00000585333 GSPT1P15170 499 aaKnown RBP15.63■□□□□ 0.09
TRIM47-202ENST00000585333 CHAF1AQ13111 956 aaPredicted RBP15.63■□□□□ 0.09
TRIM47-202ENST00000585333 TTLL5Q6EMB2 1281 aa15.63■□□□□ 0.09
TRIM47-202ENST00000585333 WWC3Q9ULE0 1092 aa15.63■□□□□ 0.09
TRIM47-202ENST00000585333 LDHBP07195 334 aaKnown RBP15.62■□□□□ 0.09
TRIM47-202ENST00000585333 LDHCP07864 332 aa15.62■□□□□ 0.09
TRIM47-202ENST00000585333 DOK7Q18PE1 504 aa15.62■□□□□ 0.09
TRIM47-202ENST00000585333 GPR101Q96P66 508 aaPredicted RBP15.62■□□□□ 0.09
TRIM47-202ENST00000585333 DBNDD1Q9H9R9 158 aa15.62■□□□□ 0.09
TRIM47-202ENST00000585333 SNRKQ9NRH2 765 aa15.62■□□□□ 0.09
TRIM47-202ENST00000585333 ABCF2Q9UG63 623 aa15.62■□□□□ 0.09
TRIM47-202ENST00000585333 RAD50Q92878 1312 aa15.62■□□□□ 0.09
TRIM47-202ENST00000585333 GOLGB1Q14789 3259 aaKnown RBP15.62■□□□□ 0.09
TRIM47-202ENST00000585333 IDH1O75874 414 aaKnown RBP15.61■□□□□ 0.09
TRIM47-202ENST00000585333 CYP2E1P05181 493 aaPredicted RBP15.61■□□□□ 0.09
TRIM47-202ENST00000585333 RPS12P25398 132 aaKnown RBP15.61■□□□□ 0.09
TRIM47-202ENST00000585333 GTF2IP78347 998 aa15.61■□□□□ 0.09
TRIM47-202ENST00000585333 SCARF1Q14162 830 aa15.61■□□□□ 0.09
TRIM47-202ENST00000585333 UBE3CQ15386 1083 aa15.61■□□□□ 0.09
TRIM47-202ENST00000585333 MFSD14BQ5SR56 506 aa15.61■□□□□ 0.09
TRIM47-202ENST00000585333 DZIP1Q86YF9 867 aaKnown RBP15.61■□□□□ 0.09
TRIM47-202ENST00000585333 NOL10Q9BSC4 688 aaKnown RBP15.61■□□□□ 0.09
TRIM47-202ENST00000585333 RAI14Q9P0K7 980 aa15.61■□□□□ 0.09
TRIM47-202ENST00000585333 IQSEC3Q9UPP2 1182 aaPredicted RBP15.61■□□□□ 0.09
TRIM47-202ENST00000585333 WTIPA6NIX2 430 aaPredicted RBP15.6■□□□□ 0.09
TRIM47-202ENST00000585333 CIAPIN1Q6FI81 312 aa15.6■□□□□ 0.09
TRIM47-202ENST00000585333 FBXW7Q969H0 707 aa15.6■□□□□ 0.09
TRIM47-202ENST00000585333 HDAC9Q9UKV0 1011 aa15.6■□□□□ 0.09
TRIM47-202ENST00000585333 AK9Q5TCS8 1911 aa15.6■□□□□ 0.09
TRIM47-202ENST00000585333 AKAP11Q9UKA4 1901 aa15.6■□□□□ 0.09
TRIM47-202ENST00000585333 RNF113AO15541 343 aaKnown RBP15.59■□□□□ 0.09
TRIM47-202ENST00000585333 YBX3P16989 372 aaKnown RBP eCLIP15.59■□□□□ 0.09
TRIM47-202ENST00000585333 YY1P25490 414 aa15.59■□□□□ 0.09
TRIM47-202ENST00000585333 HDLBPQ00341 1268 aaKnown RBP15.59■□□□□ 0.09
TRIM47-202ENST00000585333 SLC9C2Q5TAH2 1124 aa15.59■□□□□ 0.09
TRIM47-202ENST00000585333 OGFOD1Q8N543 542 aa15.59■□□□□ 0.09
TRIM47-202ENST00000585333 AGBL3Q8NEM8 1001 aa15.59■□□□□ 0.09
TRIM47-202ENST00000585333 MRIQ9BWK5 157 aa15.59■□□□□ 0.09
TRIM47-202ENST00000585333 UPF2Q9HAU5 1272 aaKnown RBP15.59■□□□□ 0.09
TRIM47-202ENST00000585333 HELLSQ9NRZ9 838 aa15.59■□□□□ 0.09
TRIM47-202ENST00000585333 CHD4Q14839 1912 aa15.58■□□□□ 0.09
TRIM47-202ENST00000585333 FZD9O00144 591 aa15.58■□□□□ 0.08
TRIM47-202ENST00000585333 EPB41L2O43491 1005 aaKnown RBP15.58■□□□□ 0.08
TRIM47-202ENST00000585333 REC8O95072 547 aa15.58■□□□□ 0.08
TRIM47-202ENST00000585333 MAP4K4O95819 1239 aaPredicted RBP15.58■□□□□ 0.08
TRIM47-202ENST00000585333 VIL1P09327 827 aaKnown RBP15.58■□□□□ 0.08
TRIM47-202ENST00000585333 PLCG2P16885 1265 aa15.58■□□□□ 0.08
TRIM47-202ENST00000585333 RASSF7Q02833 373 aa15.58■□□□□ 0.08
TRIM47-202ENST00000585333 NAA16Q6N069 864 aaPredicted RBP15.58■□□□□ 0.08
TRIM47-202ENST00000585333 PI16Q6UXB8 463 aa15.58■□□□□ 0.08
TRIM47-202ENST00000585333 SLC51AQ86UW1 340 aa15.58■□□□□ 0.08
TRIM47-202ENST00000585333 SKAP1Q86WV1 359 aa15.58■□□□□ 0.08
TRIM47-202ENST00000585333 APPBP2Q92624 585 aa15.58■□□□□ 0.08
TRIM47-202ENST00000585333 BAG3O95817 575 aa15.57■□□□□ 0.08
TRIM47-202ENST00000585333 CHMLP26374 656 aa15.57■□□□□ 0.08
TRIM47-202ENST00000585333 ADD2P35612 726 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms