RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 SH3TC2Q8TF17 1288 aa13.14□□□□□ -0.31
GGA3-219ENST00000584550 ELP3Q9H9T3 547 aa13.14□□□□□ -0.31
GGA3-219ENST00000584550 VEZTQ9HBM0 779 aa13.14□□□□□ -0.31
GGA3-219ENST00000584550 RBM27Q9P2N5 1060 aaKnown RBP13.14□□□□□ -0.31
GGA3-219ENST00000584550 CEP290O15078 2479 aa13.14□□□□□ -0.31
GGA3-219ENST00000584550 RANBP2P49792 3224 aaKnown RBP13.13□□□□□ -0.31
GGA3-219ENST00000584550 IREB2P48200 963 aaKnown RBP13.13□□□□□ -0.31
GGA3-219ENST00000584550 SUPT20HL1Q3ZLR7 823 aa13.13□□□□□ -0.31
GGA3-219ENST00000584550 DPF3Q92784 378 aa13.13□□□□□ -0.31
GGA3-219ENST00000584550 ZNF804BA4D1E1 1349 aa13.13□□□□□ -0.31
GGA3-219ENST00000584550 AOX1Q06278 1338 aa13.13□□□□□ -0.31
GGA3-219ENST00000584550 LAMB1P07942 1786 aa13.12□□□□□ -0.31
GGA3-219ENST00000584550 MMP14P50281 582 aa13.12□□□□□ -0.31
GGA3-219ENST00000584550 ANKRD13AQ8IZ07 590 aa13.12□□□□□ -0.31
GGA3-219ENST00000584550 CERS5Q8N5B7 392 aa13.12□□□□□ -0.31
GGA3-219ENST00000584550 CNKSR2Q8WXI2 1034 aa13.12□□□□□ -0.31
GGA3-219ENST00000584550 OPTNQ96CV9 577 aa13.12□□□□□ -0.31
GGA3-219ENST00000584550 PRMT6Q96LA8 375 aaPredicted RBP13.12□□□□□ -0.31
GGA3-219ENST00000584550 METTL22Q9BUU2 404 aaPredicted RBP13.12□□□□□ -0.31
GGA3-219ENST00000584550 MRS2Q9HD23 443 aa13.12□□□□□ -0.31
GGA3-219ENST00000584550 MBIPQ9NS73 344 aa13.12□□□□□ -0.31
GGA3-219ENST00000584550 JAG2Q9Y219 1238 aa13.12□□□□□ -0.31
GGA3-219ENST00000584550 LEMD3Q9Y2U8 911 aa13.12□□□□□ -0.31
GGA3-219ENST00000584550 COL6A3P12111 3177 aa13.12□□□□□ -0.31
GGA3-219ENST00000584550 COL1A1P02452 1464 aaPredicted RBP13.11□□□□□ -0.31
GGA3-219ENST00000584550 TESPA1A2RU30 521 aaPredicted RBP13.11□□□□□ -0.31
GGA3-219ENST00000584550 MYO1BO43795 1136 aa13.11□□□□□ -0.31
GGA3-219ENST00000584550 IGHMBP2P38935 993 aaKnown RBP13.11□□□□□ -0.31
GGA3-219ENST00000584550 KCNJ4P48050 445 aa13.11□□□□□ -0.31
GGA3-219ENST00000584550 RBM5P52756 815 aaKnown RBP eCLIP13.11□□□□□ -0.31
GGA3-219ENST00000584550 TAF1CQ15572 869 aaPredicted RBP13.11□□□□□ -0.31
GGA3-219ENST00000584550 CFAP100Q494V2 611 aa13.11□□□□□ -0.31
GGA3-219ENST00000584550 ARHGAP39Q9C0H5 1083 aa13.11□□□□□ -0.31
GGA3-219ENST00000584550 MAP3K2Q9Y2U5 619 aa13.11□□□□□ -0.31
GGA3-219ENST00000584550 A0A0C4DFX4 3053 aa13.11□□□□□ -0.31
GGA3-219ENST00000584550 ZSWIM8A7E2V4 1837 aa13.11□□□□□ -0.31
GGA3-219ENST00000584550 SNAP23O00161 211 aa13.1□□□□□ -0.31
GGA3-219ENST00000584550 RASA3Q14644 834 aa13.1□□□□□ -0.31
GGA3-219ENST00000584550 ARHGEF6Q15052 776 aa13.1□□□□□ -0.31
GGA3-219ENST00000584550 BRI3BPQ8WY22 251 aa13.1□□□□□ -0.31
GGA3-219ENST00000584550 RUNDC1Q96C34 613 aa13.1□□□□□ -0.31
GGA3-219ENST00000584550 MS4A4AQ96JQ5 239 aa13.1□□□□□ -0.31
GGA3-219ENST00000584550 ZFYVE28Q9HCC9 887 aa13.1□□□□□ -0.31
GGA3-219ENST00000584550 CD209Q9NNX6 404 aa13.1□□□□□ -0.31
GGA3-219ENST00000584550 PPP2R3BQ9Y5P8 575 aa13.1□□□□□ -0.31
GGA3-219ENST00000584550 MYH3P11055 1940 aa13.09□□□□□ -0.31
GGA3-219ENST00000584550 ECM29Q5VYK3 1845 aa13.09□□□□□ -0.31
GGA3-219ENST00000584550 CCL15-CCL14A0A0B4J2E2 113 aa13.09□□□□□ -0.31
GGA3-219ENST00000584550 SPDYE2BA6NHP3 402 aa13.09□□□□□ -0.31
GGA3-219ENST00000584550 UNCXA6NJT0 531 aa13.09□□□□□ -0.31
GGA3-219ENST00000584550 IGKV5-2P06315 115 aa13.09□□□□□ -0.31
GGA3-219ENST00000584550 SPDYE6P0CI01 402 aa13.09□□□□□ -0.31
GGA3-219ENST00000584550 CCL15Q16663 113 aa13.09□□□□□ -0.31
GGA3-219ENST00000584550 CWF19L2Q2TBE0 894 aaKnown RBP13.09□□□□□ -0.31
GGA3-219ENST00000584550 FAM43AQ8N2R8 423 aa13.09□□□□□ -0.31
GGA3-219ENST00000584550 MTMR14Q8NCE2 650 aa13.09□□□□□ -0.31
GGA3-219ENST00000584550 MPHOSPH8Q99549 860 aa13.09□□□□□ -0.31
GGA3-219ENST00000584550 ANKRD2Q9GZV1 360 aa13.09□□□□□ -0.31
GGA3-219ENST00000584550 OTOFQ9HC10 1997 aa13.09□□□□□ -0.31
GGA3-219ENST00000584550 TAF5LO75529 589 aa13.08□□□□□ -0.32
GGA3-219ENST00000584550 DDX58O95786 925 aaKnown RBP13.08□□□□□ -0.32
GGA3-219ENST00000584550 CDAN1Q8IWY9 1227 aa13.08□□□□□ -0.32
GGA3-219ENST00000584550 HELBQ8NG08 1087 aaPredicted RBP13.08□□□□□ -0.32
GGA3-219ENST00000584550 PI4KAP2A4QPH2 592 aa13.07□□□□□ -0.32
GGA3-219ENST00000584550 ITGA6P23229 1130 aa13.07□□□□□ -0.32
GGA3-219ENST00000584550 CHRNDQ07001 517 aa13.07□□□□□ -0.32
GGA3-219ENST00000584550 MTFR1Q15390 333 aa13.07□□□□□ -0.32
GGA3-219ENST00000584550 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.07□□□□□ -0.32
GGA3-219ENST00000584550 UBE3BQ7Z3V4 1068 aa13.07□□□□□ -0.32
GGA3-219ENST00000584550 PI4KAP1Q8N8J0 262 aa13.07□□□□□ -0.32
GGA3-219ENST00000584550 C8orf58Q8NAV2 365 aa13.07□□□□□ -0.32
GGA3-219ENST00000584550 GTF2A2P52657 109 aa13.06□□□□□ -0.32
GGA3-219ENST00000584550 KIF22Q14807 665 aa13.06□□□□□ -0.32
GGA3-219ENST00000584550 SHISA4Q96DD7 197 aa13.06□□□□□ -0.32
GGA3-219ENST00000584550 APAF1O14727 1248 aa13.05□□□□□ -0.32
GGA3-219ENST00000584550 LACTBP83111 547 aaPredicted RBP13.05□□□□□ -0.32
GGA3-219ENST00000584550 NEXNQ0ZGT2 675 aa13.05□□□□□ -0.32
GGA3-219ENST00000584550 VGLL4Q14135 290 aa13.05□□□□□ -0.32
GGA3-219ENST00000584550 KSR2Q6VAB6 950 aa13.05□□□□□ -0.32
GGA3-219ENST00000584550 FAM9BQ8IZU0 186 aa13.05□□□□□ -0.32
GGA3-219ENST00000584550 TDRD3Q9H7E2 651 aaKnown RBP13.05□□□□□ -0.32
GGA3-219ENST00000584550 NEURL1BA8MQ27 555 aa13.04□□□□□ -0.32
GGA3-219ENST00000584550 TCP10L2B9ZVM9 353 aa13.04□□□□□ -0.32
GGA3-219ENST00000584550 ZNF853P0CG23 659 aa13.04□□□□□ -0.32
GGA3-219ENST00000584550 MAP3K9P80192 1104 aa13.04□□□□□ -0.32
GGA3-219ENST00000584550 TMEM39BQ9GZU3 492 aa13.04□□□□□ -0.32
GGA3-219ENST00000584550 ZNF70Q9UC06 446 aaPredicted RBP13.04□□□□□ -0.32
GGA3-219ENST00000584550 H7C1W4 665 aa13.03□□□□□ -0.32
GGA3-219ENST00000584550 TLR2O60603 784 aa13.03□□□□□ -0.32
GGA3-219ENST00000584550 WDHD1O75717 1129 aaPredicted RBP13.03□□□□□ -0.32
GGA3-219ENST00000584550 IL1R1P14778 569 aa13.03□□□□□ -0.32
GGA3-219ENST00000584550 CCDC30Q5VVM6 783 aa13.03□□□□□ -0.32
GGA3-219ENST00000584550 ZNF804AQ7Z570 1209 aa13.03□□□□□ -0.32
GGA3-219ENST00000584550 TEPSINQ96N21 525 aa13.03□□□□□ -0.32
GGA3-219ENST00000584550 CSADQ9Y600 493 aa13.03□□□□□ -0.32
GGA3-219ENST00000584550 IRS2Q9Y4H2 1338 aa13.03□□□□□ -0.32
GGA3-219ENST00000584550 LAMA3Q16787 3333 aa13.03□□□□□ -0.32
GGA3-219ENST00000584550 BTBD19C9JJ37 291 aa13.02□□□□□ -0.33
GGA3-219ENST00000584550 SOX1O00570 391 aaPredicted RBP13.02□□□□□ -0.33
GGA3-219ENST00000584550 PLIN1O60240 522 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms