RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 MCAMP43121 646 aa22.3■■□□□ 1.16
RFFL-211ENST00000584541 RASGRF1Q13972 1273 aa22.3■■□□□ 1.16
RFFL-211ENST00000584541 SPATA5Q8NB90 893 aa22.3■■□□□ 1.16
RFFL-211ENST00000584541 HAUS7Q99871 368 aa22.3■■□□□ 1.16
RFFL-211ENST00000584541 DNAJC2Q99543 621 aaKnown RBP22.29■■□□□ 1.16
RFFL-211ENST00000584541 HMG20BQ9P0W2 317 aa22.29■■□□□ 1.16
RFFL-211ENST00000584541 ZNRF3Q9ULT6 936 aa22.29■■□□□ 1.16
RFFL-211ENST00000584541 PDS5AQ29RF7 1337 aaKnown RBP22.29■■□□□ 1.16
RFFL-211ENST00000584541 CHAF1AQ13111 956 aaPredicted RBP22.28■■□□□ 1.16
RFFL-211ENST00000584541 SCARF1Q14162 830 aa22.28■■□□□ 1.16
RFFL-211ENST00000584541 TTC22Q5TAA0 569 aa22.28■■□□□ 1.16
RFFL-211ENST00000584541 FBXW7Q969H0 707 aa22.28■■□□□ 1.16
RFFL-211ENST00000584541 SNRKQ9NRH2 765 aa22.28■■□□□ 1.16
RFFL-211ENST00000584541 TIAM2Q8IVF5 1701 aa22.28■■□□□ 1.16
RFFL-211ENST00000584541 SCN9AQ15858 1988 aa22.27■■□□□ 1.16
RFFL-211ENST00000584541 WDR66Q8TBY9 1149 aa22.27■■□□□ 1.16
RFFL-211ENST00000584541 COL4A5P29400 1685 aa22.26■■□□□ 1.15
RFFL-211ENST00000584541 TRIM6-TRIM34B2RNG4 842 aa22.26■■□□□ 1.15
RFFL-211ENST00000584541 ZAP70P43403 619 aa22.26■■□□□ 1.15
RFFL-211ENST00000584541 GTF2IP78347 998 aa22.26■■□□□ 1.15
RFFL-211ENST00000584541 TTF1Q15361 905 aaPredicted RBP22.26■■□□□ 1.15
RFFL-211ENST00000584541 ZGPATQ8N5A5 531 aaKnown RBP22.26■■□□□ 1.15
RFFL-211ENST00000584541 TBC1D22AQ8WUA7 517 aa22.26■■□□□ 1.15
RFFL-211ENST00000584541 PAG1Q9NWQ8 432 aa22.26■■□□□ 1.15
RFFL-211ENST00000584541 FAM205AQ6ZU69 1335 aa22.26■■□□□ 1.15
RFFL-211ENST00000584541 USP17L3A6NCW0 530 aa22.25■■□□□ 1.15
RFFL-211ENST00000584541 USP17L4A6NCW7 530 aa22.25■■□□□ 1.15
RFFL-211ENST00000584541 TTLL5Q6EMB2 1281 aa22.25■■□□□ 1.15
RFFL-211ENST00000584541 PI16Q6UXB8 463 aa22.25■■□□□ 1.15
RFFL-211ENST00000584541 USP17L1Q7RTZ2 530 aa22.25■■□□□ 1.15
RFFL-211ENST00000584541 CNTROBQ8N137 903 aa22.25■■□□□ 1.15
RFFL-211ENST00000584541 RNF181Q9P0P0 153 aa22.25■■□□□ 1.15
RFFL-211ENST00000584541 COL1A1P02452 1464 aaPredicted RBP22.25■■□□□ 1.15
RFFL-211ENST00000584541 MYH7P12883 1935 aa22.25■■□□□ 1.15
RFFL-211ENST00000584541 DOCK2Q92608 1830 aa22.24■■□□□ 1.15
RFFL-211ENST00000584541 MYO5AQ9Y4I1 1855 aaKnown RBP22.24■■□□□ 1.15
RFFL-211ENST00000584541 GOLIM4O00461 696 aa22.24■■□□□ 1.15
RFFL-211ENST00000584541 PRELPP51888 382 aa22.24■■□□□ 1.15
RFFL-211ENST00000584541 EIF6P56537 245 aaKnown RBP22.24■■□□□ 1.15
RFFL-211ENST00000584541 STRIP1Q5VSL9 837 aa22.24■■□□□ 1.15
RFFL-211ENST00000584541 NDUFB9Q9Y6M9 179 aa22.24■■□□□ 1.15
RFFL-211ENST00000584541 ZNF646O15015 1829 aaPredicted RBP22.23■■□□□ 1.15
RFFL-211ENST00000584541 YDJCA8MPS7 323 aa22.23■■□□□ 1.15
RFFL-211ENST00000584541 MAP4K4O95819 1239 aaPredicted RBP22.23■■□□□ 1.15
RFFL-211ENST00000584541 C9orf131Q5VYM1 1079 aa22.23■■□□□ 1.15
RFFL-211ENST00000584541 RILPL2Q969X0 211 aa22.23■■□□□ 1.15
RFFL-211ENST00000584541 EVI5LQ96CN4 794 aa22.23■■□□□ 1.15
RFFL-211ENST00000584541 JAG2Q9Y219 1238 aa22.23■■□□□ 1.15
RFFL-211ENST00000584541 SALL1Q9NSC2 1324 aa22.23■■□□□ 1.15
RFFL-211ENST00000584541 CYP2E1P05181 493 aaPredicted RBP22.22■■□□□ 1.15
RFFL-211ENST00000584541 GSPT1P15170 499 aaKnown RBP22.22■■□□□ 1.15
RFFL-211ENST00000584541 TNIP1Q15025 636 aa22.22■■□□□ 1.15
RFFL-211ENST00000584541 BMP2KLQ5H9B9 411 aa22.22■■□□□ 1.15
RFFL-211ENST00000584541 SPTY2D1Q68D10 685 aaPredicted RBP22.22■■□□□ 1.15
RFFL-211ENST00000584541 ABCF2Q9UG63 623 aa22.22■■□□□ 1.15
RFFL-211ENST00000584541 FZD9O00144 591 aa22.21■■□□□ 1.15
RFFL-211ENST00000584541 RAD17O75943 681 aa22.21■■□□□ 1.15
RFFL-211ENST00000584541 FKBP1AP62942 108 aaKnown RBP22.21■■□□□ 1.15
RFFL-211ENST00000584541 LRRFIP1Q32MZ4 808 aaKnown RBP22.21■■□□□ 1.15
RFFL-211ENST00000584541 MFSD14BQ5SR56 506 aa22.21■■□□□ 1.15
RFFL-211ENST00000584541 CIAPIN1Q6FI81 312 aa22.21■■□□□ 1.15
RFFL-211ENST00000584541 KCNQ5Q9NR82 932 aa22.21■■□□□ 1.15
RFFL-211ENST00000584541 LRP2BPQ9P2M1 347 aa22.21■■□□□ 1.15
RFFL-211ENST00000584541 MAST2Q6P0Q8 1798 aa22.2■■□□□ 1.14
RFFL-211ENST00000584541 ERICH6Q7L0X2 663 aa22.2■■□□□ 1.14
RFFL-211ENST00000584541 EDC3Q96F86 508 aaKnown RBP22.2■■□□□ 1.14
RFFL-211ENST00000584541 FSD1Q9BTV5 496 aa22.2■■□□□ 1.14
RFFL-211ENST00000584541 ANTXR1Q9H6X2 564 aa22.2■■□□□ 1.14
RFFL-211ENST00000584541 MYO3BQ8WXR4 1341 aa22.2■■□□□ 1.14
RFFL-211ENST00000584541 IGSF3O75054 1194 aa22.19■■□□□ 1.14
RFFL-211ENST00000584541 LDHBP07195 334 aaKnown RBP22.19■■□□□ 1.14
RFFL-211ENST00000584541 SDSP20132 328 aa22.19■■□□□ 1.14
RFFL-211ENST00000584541 CXCL9Q07325 125 aa22.19■■□□□ 1.14
RFFL-211ENST00000584541 MAP3K12Q12852 859 aa22.19■■□□□ 1.14
RFFL-211ENST00000584541 DACT2Q5SW24 774 aa22.19■■□□□ 1.14
RFFL-211ENST00000584541 TBC1D9Q6ZT07 1266 aa22.19■■□□□ 1.14
RFFL-211ENST00000584541 KBTBD3Q8NAB2 608 aa22.19■■□□□ 1.14
RFFL-211ENST00000584541 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.19■■□□□ 1.14
RFFL-211ENST00000584541 PIH1D3Q9NQM4 214 aaKnown RBP22.19■■□□□ 1.14
RFFL-211ENST00000584541 SUGT1Q9Y2Z0 365 aa22.19■■□□□ 1.14
RFFL-211ENST00000584541 GOLGB1Q14789 3259 aaKnown RBP22.18■■□□□ 1.14
RFFL-211ENST00000584541 ZC3H4Q9UPT8 1303 aaKnown RBP22.18■■□□□ 1.14
RFFL-211ENST00000584541 PSMD14O00487 310 aa22.18■■□□□ 1.14
RFFL-211ENST00000584541 IDH1O75874 414 aaKnown RBP22.18■■□□□ 1.14
RFFL-211ENST00000584541 VIL1P09327 827 aaKnown RBP22.18■■□□□ 1.14
RFFL-211ENST00000584541 ZSCAN25Q6NSZ9 544 aa22.18■■□□□ 1.14
RFFL-211ENST00000584541 RAI14Q9P0K7 980 aa22.18■■□□□ 1.14
RFFL-211ENST00000584541 YY1P25490 414 aa22.17■■□□□ 1.14
RFFL-211ENST00000584541 RSBN1LQ6PCB5 846 aaPredicted RBP22.17■■□□□ 1.14
RFFL-211ENST00000584541 MAST3O60307 1309 aa22.16■■□□□ 1.14
RFFL-211ENST00000584541 TICAM2Q86XR7 235 aa22.16■■□□□ 1.14
RFFL-211ENST00000584541 DZIP1Q86YF9 867 aaKnown RBP22.16■■□□□ 1.14
RFFL-211ENST00000584541 RFX7Q2KHR2 1363 aa22.15■■□□□ 1.14
RFFL-211ENST00000584541 ZNF541Q9H0D2 1346 aa22.15■■□□□ 1.14
RFFL-211ENST00000584541 ZFYP08048 801 aaPredicted RBP22.15■■□□□ 1.14
RFFL-211ENST00000584541 PRDX5P30044 214 aa22.15■■□□□ 1.14
RFFL-211ENST00000584541 AGBL3Q8NEM8 1001 aa22.15■■□□□ 1.14
RFFL-211ENST00000584541 MXD3Q9BW11 206 aa22.15■■□□□ 1.14
RFFL-211ENST00000584541 GJA3Q9Y6H8 435 aa22.15■■□□□ 1.14
RFFL-211ENST00000584541 MYH2Q9UKX2 1941 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms