RNA–Protein interactions for RNA: ENST00000584025.1

ITGB4-210, Transcript of integrin subunit beta 4, humanhuman

TSL 5

Gene ITGB4, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-210ENST00000584025 USP17L8P0C7I0 530 aa19.02■□□□□ 0.64
ITGB4-210ENST00000584025 TIMM10P62072 90 aa19.02■□□□□ 0.64
ITGB4-210ENST00000584025 CHAF1AQ13111 956 aaPredicted RBP19.02■□□□□ 0.64
ITGB4-210ENST00000584025 TBC1D10BQ4KMP7 808 aaPredicted RBP19.02■□□□□ 0.64
ITGB4-210ENST00000584025 SAMD7Q7Z3H4 446 aa19.02■□□□□ 0.64
ITGB4-210ENST00000584025 TRPM4Q8TD43 1214 aa19.02■□□□□ 0.64
ITGB4-210ENST00000584025 NEUROD6Q96NK8 337 aa19.02■□□□□ 0.64
ITGB4-210ENST00000584025 CRBNQ96SW2 442 aa19.02■□□□□ 0.64
ITGB4-210ENST00000584025 FAM205AQ6ZU69 1335 aa19.01■□□□□ 0.63
ITGB4-210ENST00000584025 ADORA1P30542 326 aa19.01■□□□□ 0.63
ITGB4-210ENST00000584025 GNL3LQ9NVN8 582 aaKnown RBP19.01■□□□□ 0.63
ITGB4-210ENST00000584025 EXOC6BQ9Y2D4 811 aa19.01■□□□□ 0.63
ITGB4-210ENST00000584025 ZNF280AP59817 542 aaPredicted RBP19■□□□□ 0.63
ITGB4-210ENST00000584025 KIF4BQ2VIQ3 1234 aa19■□□□□ 0.63
ITGB4-210ENST00000584025 KIAA0825Q8IV33 1275 aa19■□□□□ 0.63
ITGB4-210ENST00000584025 SIRT2Q8IXJ6 389 aa19■□□□□ 0.63
ITGB4-210ENST00000584025 OGFOD1Q8N543 542 aa19■□□□□ 0.63
ITGB4-210ENST00000584025 XAGE2Q96GT9 111 aa19■□□□□ 0.63
ITGB4-210ENST00000584025 SUPT16HQ9Y5B9 1047 aaKnown RBP19■□□□□ 0.63
ITGB4-210ENST00000584025 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19■□□□□ 0.63
ITGB4-210ENST00000584025 HIRAP54198 1017 aaPredicted RBP18.99■□□□□ 0.63
ITGB4-210ENST00000584025 FKBP1AP62942 108 aaKnown RBP18.99■□□□□ 0.63
ITGB4-210ENST00000584025 HSP90AB4PQ58FF6 505 aa18.99■□□□□ 0.63
ITGB4-210ENST00000584025 MFSD14BQ5SR56 506 aa18.99■□□□□ 0.63
ITGB4-210ENST00000584025 GORABQ5T7V8 394 aa18.99■□□□□ 0.63
ITGB4-210ENST00000584025 MAP1SQ66K74 1059 aaPredicted RBP18.99■□□□□ 0.63
ITGB4-210ENST00000584025 ERC1Q8IUD2 1116 aa18.99■□□□□ 0.63
ITGB4-210ENST00000584025 CERS5Q8N5B7 392 aa18.99■□□□□ 0.63
ITGB4-210ENST00000584025 HDAC9Q9UKV0 1011 aa18.99■□□□□ 0.63
ITGB4-210ENST00000584025 AKAP11Q9UKA4 1901 aa18.98■□□□□ 0.63
ITGB4-210ENST00000584025 MYH2Q9UKX2 1941 aa18.98■□□□□ 0.63
ITGB4-210ENST00000584025 F8W031 263 aaPredicted RBP18.98■□□□□ 0.63
ITGB4-210ENST00000584025 EGFRP00533 1210 aa18.98■□□□□ 0.63
ITGB4-210ENST00000584025 PHKA1P46020 1223 aa18.98■□□□□ 0.63
ITGB4-210ENST00000584025 GPR108Q9NPR9 543 aa18.98■□□□□ 0.63
ITGB4-210ENST00000584025 MYO5AQ9Y4I1 1855 aaKnown RBP18.98■□□□□ 0.63
ITGB4-210ENST00000584025 APBB1O00213 710 aa18.97■□□□□ 0.63
ITGB4-210ENST00000584025 TNNI3KQ59H18 835 aa18.97■□□□□ 0.63
ITGB4-210ENST00000584025 CCDC102BQ68D86 513 aa18.97■□□□□ 0.63
ITGB4-210ENST00000584025 CNTROBQ8N137 903 aa18.97■□□□□ 0.63
ITGB4-210ENST00000584025 TBC1D22AQ8WUA7 517 aa18.97■□□□□ 0.63
ITGB4-210ENST00000584025 MYOZ2Q9NPC6 264 aa18.97■□□□□ 0.63
ITGB4-210ENST00000584025 FPGT-TNNI3KV9GXZ4 949 aa18.97■□□□□ 0.63
ITGB4-210ENST00000584025 MMP14P50281 582 aa18.96■□□□□ 0.63
ITGB4-210ENST00000584025 ZC3H15Q8WU90 426 aaKnown RBP18.96■□□□□ 0.63
ITGB4-210ENST00000584025 HSPA6P17066 643 aa18.95■□□□□ 0.62
ITGB4-210ENST00000584025 DENND2AQ9ULE3 1009 aa18.95■□□□□ 0.62
ITGB4-210ENST00000584025 COL1A1P02452 1464 aaPredicted RBP18.95■□□□□ 0.62
ITGB4-210ENST00000584025 SEMA3EO15041 775 aa18.94■□□□□ 0.62
ITGB4-210ENST00000584025 SCARF1Q14162 830 aa18.94■□□□□ 0.62
ITGB4-210ENST00000584025 WDR66Q8TBY9 1149 aa18.94■□□□□ 0.62
ITGB4-210ENST00000584025 RHPN1Q8TCX5 695 aa18.94■□□□□ 0.62
ITGB4-210ENST00000584025 PGAP2Q9UHJ9 254 aa18.94■□□□□ 0.62
ITGB4-210ENST00000584025 TTF2Q9UNY4 1162 aaKnown RBP18.94■□□□□ 0.62
ITGB4-210ENST00000584025 RAB11FIP3O75154 756 aa18.93■□□□□ 0.62
ITGB4-210ENST00000584025 ITGBL1O95965 494 aaPredicted RBP18.93■□□□□ 0.62
ITGB4-210ENST00000584025 DCPSQ96C86 337 aaKnown RBP18.93■□□□□ 0.62
ITGB4-210ENST00000584025 KIF1BPQ96EK5 621 aa18.93■□□□□ 0.62
ITGB4-210ENST00000584025 DBNDD2Q9BQY9 259 aa18.93■□□□□ 0.62
ITGB4-210ENST00000584025 CCDC8Q9H0W5 538 aaPredicted RBP18.93■□□□□ 0.62
ITGB4-210ENST00000584025 BCL11AQ9H165 835 aa18.93■□□□□ 0.62
ITGB4-210ENST00000584025 IL1RAPL2Q9NP60 686 aa18.93■□□□□ 0.62
ITGB4-210ENST00000584025 PCDHB15Q9Y5E8 787 aa18.93■□□□□ 0.62
ITGB4-210ENST00000584025 AK9Q5TCS8 1911 aa18.93■□□□□ 0.62
ITGB4-210ENST00000584025 RBM5P52756 815 aaKnown RBP eCLIP18.92■□□□□ 0.62
ITGB4-210ENST00000584025 RASGRF1Q13972 1273 aa18.92■□□□□ 0.62
ITGB4-210ENST00000584025 DLGAP5Q15398 846 aa18.92■□□□□ 0.62
ITGB4-210ENST00000584025 AACSQ86V21 672 aa18.92■□□□□ 0.62
ITGB4-210ENST00000584025 GGA3Q9NZ52 723 aa18.92■□□□□ 0.62
ITGB4-210ENST00000584025 ASTN2O75129 1339 aaPredicted RBP18.92■□□□□ 0.62
ITGB4-210ENST00000584025 WNT10BO00744 389 aa18.91■□□□□ 0.62
ITGB4-210ENST00000584025 UQCRFS1P1P0C7P4 283 aa18.91■□□□□ 0.62
ITGB4-210ENST00000584025 APLP1P51693 650 aa18.91■□□□□ 0.62
ITGB4-210ENST00000584025 GRIK5Q16478 980 aa18.91■□□□□ 0.62
ITGB4-210ENST00000584025 NBPF9Q3BBW0 867 aa18.91■□□□□ 0.62
ITGB4-210ENST00000584025 CFAP100Q494V2 611 aa18.91■□□□□ 0.62
ITGB4-210ENST00000584025 CCDC158Q5M9N0 1113 aa18.91■□□□□ 0.62
ITGB4-210ENST00000584025 TTC39AQ5SRH9 613 aa18.91■□□□□ 0.62
ITGB4-210ENST00000584025 ANGEL2Q5VTE6 544 aaKnown RBP18.91■□□□□ 0.62
ITGB4-210ENST00000584025 EAF2Q96CJ1 260 aaPredicted RBP18.91■□□□□ 0.62
ITGB4-210ENST00000584025 GLIS2Q9BZE0 524 aaPredicted RBP18.91■□□□□ 0.62
ITGB4-210ENST00000584025 TRAF5O00463 557 aa18.9■□□□□ 0.62
ITGB4-210ENST00000584025 CDC37L1Q7L3B6 337 aa18.9■□□□□ 0.62
ITGB4-210ENST00000584025 KRT26Q7Z3Y9 468 aa18.9■□□□□ 0.62
ITGB4-210ENST00000584025 USP48Q86UV5 1035 aa18.9■□□□□ 0.62
ITGB4-210ENST00000584025 CLASRPQ8N2M8 674 aaKnown RBP18.9■□□□□ 0.62
ITGB4-210ENST00000584025 EXOC6Q8TAG9 804 aa18.9■□□□□ 0.62
ITGB4-210ENST00000584025 DBNLQ9UJU6 430 aaKnown RBP18.9■□□□□ 0.62
ITGB4-210ENST00000584025 MAST3O60307 1309 aa18.9■□□□□ 0.62
ITGB4-210ENST00000584025 PASKQ96RG2 1323 aa18.9■□□□□ 0.62
ITGB4-210ENST00000584025 ZBTB22O15209 634 aa18.89■□□□□ 0.61
ITGB4-210ENST00000584025 ARID4AP29374 1257 aaPredicted RBP18.89■□□□□ 0.61
ITGB4-210ENST00000584025 AAMPQ13685 434 aa18.89■□□□□ 0.61
ITGB4-210ENST00000584025 SULF1Q8IWU6 871 aa18.89■□□□□ 0.61
ITGB4-210ENST00000584025 ZGPATQ8N5A5 531 aaKnown RBP18.89■□□□□ 0.61
ITGB4-210ENST00000584025 TLR7Q9NYK1 1049 aaKnown RBP18.89■□□□□ 0.61
ITGB4-210ENST00000584025 SUGT1Q9Y2Z0 365 aa18.89■□□□□ 0.61
ITGB4-210ENST00000584025 LDHBP07195 334 aaKnown RBP18.88■□□□□ 0.61
ITGB4-210ENST00000584025 CRKP46108 304 aa18.88■□□□□ 0.61
ITGB4-210ENST00000584025 FMR1Q06787 632 aaKnown RBP eCLIP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms