RNA–Protein interactions for RNA: ENST00000583775.1

PRKCA-205, Transcript of protein kinase C alpha, humanhuman

TSL 3

Gene PRKCA, Length 321 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-205ENST00000583775 PRIMPOLQ96LW4 560 aa8.15□□□□□ -1.1
PRKCA-205ENST00000583775 ZIC5Q96T25 663 aa8.15□□□□□ -1.1
PRKCA-205ENST00000583775 NIFKQ9BYG3 293 aaKnown RBP8.15□□□□□ -1.1
PRKCA-205ENST00000583775 STRN4Q9NRL3 753 aa8.15□□□□□ -1.1
PRKCA-205ENST00000583775 IQSEC3Q9UPP2 1182 aaPredicted RBP8.15□□□□□ -1.1
PRKCA-205ENST00000583775 YTHDC2Q9H6S0 1430 aaKnown RBP8.14□□□□□ -1.11
PRKCA-205ENST00000583775 NSD2O96028 1365 aa8.14□□□□□ -1.11
PRKCA-205ENST00000583775 EVC2Q86UK5 1308 aa8.14□□□□□ -1.11
PRKCA-205ENST00000583775 SCNN1AP37088 669 aa8.14□□□□□ -1.11
PRKCA-205ENST00000583775 SEC13P55735 322 aa8.14□□□□□ -1.11
PRKCA-205ENST00000583775 SAMD5Q5TGI4 173 aa8.14□□□□□ -1.11
PRKCA-205ENST00000583775 SIX5Q8N196 739 aa8.14□□□□□ -1.11
PRKCA-205ENST00000583775 UBR1Q8IWV7 1749 aa8.14□□□□□ -1.11
PRKCA-205ENST00000583775 ANKRD26Q9UPS8 1709 aa8.14□□□□□ -1.11
PRKCA-205ENST00000583775 NRXN3Q9Y4C0 1643 aa8.14□□□□□ -1.11
PRKCA-205ENST00000583775 ZMYM3Q14202 1370 aa8.13□□□□□ -1.11
PRKCA-205ENST00000583775 PRMT3O60678 531 aa8.13□□□□□ -1.11
PRKCA-205ENST00000583775 SMTNP53814 917 aa8.13□□□□□ -1.11
PRKCA-205ENST00000583775 MTFR1Q15390 333 aa8.13□□□□□ -1.11
PRKCA-205ENST00000583775 CC2D1BQ5T0F9 858 aaKnown RBP8.13□□□□□ -1.11
PRKCA-205ENST00000583775 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.13□□□□□ -1.11
PRKCA-205ENST00000583775 SLC4A9Q96Q91 983 aa8.13□□□□□ -1.11
PRKCA-205ENST00000583775 KRTAP9-9Q9BYP9 154 aa8.13□□□□□ -1.11
PRKCA-205ENST00000583775 KRTAP9-4Q9BYQ2 154 aa8.13□□□□□ -1.11
PRKCA-205ENST00000583775 ZDHHC3Q9NYG2 299 aa8.13□□□□□ -1.11
PRKCA-205ENST00000583775 SLAIN2Q9P270 581 aa8.13□□□□□ -1.11
PRKCA-205ENST00000583775 TRAK1Q9UPV9 953 aa8.13□□□□□ -1.11
PRKCA-205ENST00000583775 USP3Q9Y6I4 520 aa8.13□□□□□ -1.11
PRKCA-205ENST00000583775 MED14O60244 1454 aa8.13□□□□□ -1.11
PRKCA-205ENST00000583775 RIMS2Q9UQ26 1411 aa8.12□□□□□ -1.11
PRKCA-205ENST00000583775 POLR3AO14802 1390 aaPredicted RBP8.12□□□□□ -1.11
PRKCA-205ENST00000583775 ANKRD36BQ8N2N9 1353 aa8.12□□□□□ -1.11
PRKCA-205ENST00000583775 ABCC11Q96J66 1382 aa8.12□□□□□ -1.11
PRKCA-205ENST00000583775 ELOA3CA0A087WX78 387 aaPredicted RBP8.12□□□□□ -1.11
PRKCA-205ENST00000583775 ELOA3DA6NLF2 546 aaPredicted RBP8.12□□□□□ -1.11
PRKCA-205ENST00000583775 ELOA3BQ3SY89 546 aa8.12□□□□□ -1.11
PRKCA-205ENST00000583775 TMEM132EQ6IEE7 984 aa8.12□□□□□ -1.11
PRKCA-205ENST00000583775 HOMEZQ8IX15 550 aa8.12□□□□□ -1.11
PRKCA-205ENST00000583775 ELOA3Q8NG57 546 aa8.12□□□□□ -1.11
PRKCA-205ENST00000583775 PRDM6Q9NQX0 595 aa8.12□□□□□ -1.11
PRKCA-205ENST00000583775 PARP3Q9Y6F1 533 aa8.12□□□□□ -1.11
PRKCA-205ENST00000583775 NLRP1Q9C000 1473 aa8.12□□□□□ -1.11
PRKCA-205ENST00000583775 TECPR2O15040 1411 aa8.12□□□□□ -1.11
PRKCA-205ENST00000583775 ATAD2Q6PL18 1390 aa8.11□□□□□ -1.11
PRKCA-205ENST00000583775 TMEM88BA6NKF7 163 aa8.11□□□□□ -1.11
PRKCA-205ENST00000583775 ADARB2-AS1A8MUL3 147 aa8.11□□□□□ -1.11
PRKCA-205ENST00000583775 KHNYNO15037 678 aaKnown RBP8.11□□□□□ -1.11
PRKCA-205ENST00000583775 LAMC2Q13753 1193 aa8.11□□□□□ -1.11
PRKCA-205ENST00000583775 ELOAQ14241 798 aaKnown RBP8.11□□□□□ -1.11
PRKCA-205ENST00000583775 KRTAP19-1Q8IUB9 90 aa8.11□□□□□ -1.11
PRKCA-205ENST00000583775 ZFP64Q9NPA5 681 aa8.11□□□□□ -1.11
PRKCA-205ENST00000583775 TNRQ92752 1358 aa8.1□□□□□ -1.11
PRKCA-205ENST00000583775 CDK2AP1O14519 115 aa8.1□□□□□ -1.11
PRKCA-205ENST00000583775 SCG3Q8WXD2 468 aaKnown RBP8.1□□□□□ -1.11
PRKCA-205ENST00000583775 AIDAQ96BJ3 306 aa8.1□□□□□ -1.11
PRKCA-205ENST00000583775 TSPAN10Q9H1Z9 355 aaPredicted RBP8.1□□□□□ -1.11
PRKCA-205ENST00000583775 PPP4R2Q9NY27 417 aa8.1□□□□□ -1.11
PRKCA-205ENST00000583775 MARK1Q9P0L2 795 aa8.1□□□□□ -1.11
PRKCA-205ENST00000583775 STARD13Q9Y3M8 1113 aa8.1□□□□□ -1.11
PRKCA-205ENST00000583775 SHPRHQ149N8 1683 aa8.1□□□□□ -1.11
PRKCA-205ENST00000583775 FAM135BQ49AJ0 1406 aa8.1□□□□□ -1.11
PRKCA-205ENST00000583775 NSD3Q9BZ95 1437 aa8.1□□□□□ -1.11
PRKCA-205ENST00000583775 CPS1P31327 1500 aa8.09□□□□□ -1.11
PRKCA-205ENST00000583775 CGNL1Q0VF96 1302 aa8.09□□□□□ -1.11
PRKCA-205ENST00000583775 ZNF521Q96K83 1311 aa8.09□□□□□ -1.11
PRKCA-205ENST00000583775 A6NJY4 79 aa8.09□□□□□ -1.11
PRKCA-205ENST00000583775 BACH1O14867 736 aa8.09□□□□□ -1.11
PRKCA-205ENST00000583775 ARSJQ5FYB0 599 aaPredicted RBP8.09□□□□□ -1.11
PRKCA-205ENST00000583775 PRSS36Q5K4E3 855 aa8.09□□□□□ -1.11
PRKCA-205ENST00000583775 C7orf43Q8WVR3 580 aa8.09□□□□□ -1.11
PRKCA-205ENST00000583775 C3P01024 1663 aa8.08□□□□□ -1.12
PRKCA-205ENST00000583775 SCO2A0A1W2PP80 73 aa8.08□□□□□ -1.12
PRKCA-205ENST00000583775 SIN3BO75182 1162 aa8.08□□□□□ -1.12
PRKCA-205ENST00000583775 WDR43Q15061 677 aaKnown RBP eCLIP8.08□□□□□ -1.12
PRKCA-205ENST00000583775 SLC12A5Q9H2X9 1139 aa8.08□□□□□ -1.12
PRKCA-205ENST00000583775 CABP1Q9NZU7 370 aa8.08□□□□□ -1.12
PRKCA-205ENST00000583775 PRR12Q9ULL5 1215 aa8.08□□□□□ -1.12
PRKCA-205ENST00000583775 TMEM2Q9UHN6 1383 aa8.08□□□□□ -1.12
PRKCA-205ENST00000583775 SLIT1O75093 1534 aa8.08□□□□□ -1.12
PRKCA-205ENST00000583775 KIF20BQ96Q89 1820 aa8.08□□□□□ -1.12
PRKCA-205ENST00000583775 FER1L4A9Z1Z3 1794 aa8.07□□□□□ -1.12
PRKCA-205ENST00000583775 ATP7BP35670 1465 aa8.07□□□□□ -1.12
PRKCA-205ENST00000583775 CD163L1Q9NR16 1453 aa8.07□□□□□ -1.12
PRKCA-205ENST00000583775 ARHGAP23Q9P227 1491 aa8.07□□□□□ -1.12
PRKCA-205ENST00000583775 ADGRB2O60241 1585 aa8.07□□□□□ -1.12
PRKCA-205ENST00000583775 SPDYE3A6NKU9 549 aa8.07□□□□□ -1.12
PRKCA-205ENST00000583775 PRRT3Q5FWE3 981 aa8.07□□□□□ -1.12
PRKCA-205ENST00000583775 SH3PXD2AQ5TCZ1 1133 aa8.07□□□□□ -1.12
PRKCA-205ENST00000583775 SYT9Q86SS6 491 aa8.07□□□□□ -1.12
PRKCA-205ENST00000583775 SLC9A9Q8IVB4 645 aa8.07□□□□□ -1.12
PRKCA-205ENST00000583775 MKNK1Q9BUB5 465 aa8.07□□□□□ -1.12
PRKCA-205ENST00000583775 PDIA4P13667 645 aaKnown RBP8.06□□□□□ -1.12
PRKCA-205ENST00000583775 NID1P14543 1247 aa8.06□□□□□ -1.12
PRKCA-205ENST00000583775 CNGB1Q14028 1251 aaPredicted RBP8.06□□□□□ -1.12
PRKCA-205ENST00000583775 CAPN12Q6ZSI9 719 aa8.06□□□□□ -1.12
PRKCA-205ENST00000583775 AEBP1Q8IUX7 1158 aa8.06□□□□□ -1.12
PRKCA-205ENST00000583775 TRMT2AQ8IZ69 625 aaKnown RBP8.06□□□□□ -1.12
PRKCA-205ENST00000583775 TNFRSF25Q93038 417 aa8.06□□□□□ -1.12
PRKCA-205ENST00000583775 PRAM1Q96QH2 718 aa8.06□□□□□ -1.12
PRKCA-205ENST00000583775 TERF2IPQ9NYB0 399 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms