RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 PIP4K2BP78356 416 aa6.68□□□□□ -1.34
VAPA-206ENST00000583475 DOC2BQ14184 412 aa6.68□□□□□ -1.34
VAPA-206ENST00000583475 ENOX2Q16206 610 aaKnown RBP6.68□□□□□ -1.34
VAPA-206ENST00000583475 TXNRD3Q86VQ6 643 aa6.68□□□□□ -1.34
VAPA-206ENST00000583475 DCAF11Q8TEB1 546 aa6.68□□□□□ -1.34
VAPA-206ENST00000583475 MRPL18Q9H0U6 180 aaKnown RBP6.68□□□□□ -1.34
VAPA-206ENST00000583475 EHD4Q9H223 541 aa6.68□□□□□ -1.34
VAPA-206ENST00000583475 OSGEPQ9NPF4 335 aa6.68□□□□□ -1.34
VAPA-206ENST00000583475 LOC100996750A0A140TA64 210 aa6.67□□□□□ -1.34
VAPA-206ENST00000583475 ADAM11O75078 769 aa6.67□□□□□ -1.34
VAPA-206ENST00000583475 ALX3O95076 343 aa6.67□□□□□ -1.34
VAPA-206ENST00000583475 NOS3P29474 1203 aa6.67□□□□□ -1.34
VAPA-206ENST00000583475 IREB2P48200 963 aaKnown RBP6.67□□□□□ -1.34
VAPA-206ENST00000583475 FMR1Q06787 632 aaKnown RBP eCLIP6.67□□□□□ -1.34
VAPA-206ENST00000583475 PI16Q6UXB8 463 aa6.67□□□□□ -1.34
VAPA-206ENST00000583475 SSBP4Q9BWG4 385 aaPredicted RBP6.67□□□□□ -1.34
VAPA-206ENST00000583475 KRTAP4-6Q9BYQ5 205 aa6.67□□□□□ -1.34
VAPA-206ENST00000583475 PNMA6FA0A0J9YX94 578 aa6.66□□□□□ -1.34
VAPA-206ENST00000583475 F8W735 103 aaPredicted RBP6.66□□□□□ -1.34
VAPA-206ENST00000583475 GADD45BO75293 160 aaPredicted RBP6.66□□□□□ -1.34
VAPA-206ENST00000583475 WISP1O95388 367 aa6.66□□□□□ -1.34
VAPA-206ENST00000583475 ESRRAP11474 423 aaPredicted RBP6.66□□□□□ -1.34
VAPA-206ENST00000583475 IKBKEQ14164 716 aa6.66□□□□□ -1.34
VAPA-206ENST00000583475 ZNF423Q2M1K9 1284 aa6.66□□□□□ -1.34
VAPA-206ENST00000583475 GLIS3Q8NEA6 775 aa6.66□□□□□ -1.34
VAPA-206ENST00000583475 FOXD4L4Q8WXT5 416 aaPredicted RBP6.66□□□□□ -1.34
VAPA-206ENST00000583475 SLC7A3Q8WY07 619 aa6.66□□□□□ -1.34
VAPA-206ENST00000583475 TPSG1Q9NRR2 321 aa6.66□□□□□ -1.34
VAPA-206ENST00000583475 FURINP09958 794 aa6.65□□□□□ -1.34
VAPA-206ENST00000583475 ITPKAP23677 461 aa6.65□□□□□ -1.34
VAPA-206ENST00000583475 MAPK8P45983 427 aa6.65□□□□□ -1.34
VAPA-206ENST00000583475 C19orf57Q0VDD7 668 aa6.65□□□□□ -1.34
VAPA-206ENST00000583475 GRM2Q14416 872 aa6.65□□□□□ -1.34
VAPA-206ENST00000583475 KIAA1211Q6ZU35 1233 aa6.65□□□□□ -1.34
VAPA-206ENST00000583475 SETDB2Q96T68 719 aa6.65□□□□□ -1.34
VAPA-206ENST00000583475 AKTIPQ9H8T0 292 aa6.65□□□□□ -1.34
VAPA-206ENST00000583475 WWC3Q9ULE0 1092 aa6.65□□□□□ -1.34
VAPA-206ENST00000583475 TMEM238LA0A1B0GVL6 79 aa6.64□□□□□ -1.35
VAPA-206ENST00000583475 ARL4DP49703 201 aa6.64□□□□□ -1.35
VAPA-206ENST00000583475 DUOXA2Q1HG44 320 aa6.64□□□□□ -1.35
VAPA-206ENST00000583475 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.64□□□□□ -1.35
VAPA-206ENST00000583475 PRPF40BQ6NWY9 871 aaKnown RBP6.64□□□□□ -1.35
VAPA-206ENST00000583475 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.64□□□□□ -1.35
VAPA-206ENST00000583475 AGGF1Q8N302 714 aaeCLIP6.64□□□□□ -1.35
VAPA-206ENST00000583475 GZF1Q9H116 711 aaPredicted RBP6.64□□□□□ -1.35
VAPA-206ENST00000583475 CLEC4MQ9H2X3 399 aaPredicted RBP6.64□□□□□ -1.35
VAPA-206ENST00000583475 SOX17Q9H6I2 414 aaPredicted RBP6.64□□□□□ -1.35
VAPA-206ENST00000583475 ABCB6Q9NP58 842 aa6.64□□□□□ -1.35
VAPA-206ENST00000583475 NLRP2Q9NX02 1062 aa6.64□□□□□ -1.35
VAPA-206ENST00000583475 P4HBP07237 508 aaKnown RBP6.63□□□□□ -1.35
VAPA-206ENST00000583475 PTPN12Q05209 780 aaKnown RBP6.63□□□□□ -1.35
VAPA-206ENST00000583475 PCDH1Q08174 1060 aa6.63□□□□□ -1.35
VAPA-206ENST00000583475 RSPO4Q2I0M5 234 aaPredicted RBP6.63□□□□□ -1.35
VAPA-206ENST00000583475 NKAPLQ5M9Q1 402 aa6.63□□□□□ -1.35
VAPA-206ENST00000583475 Q6ZS46 218 aa6.63□□□□□ -1.35
VAPA-206ENST00000583475 DZIP1LQ8IYY4 767 aaKnown RBP6.63□□□□□ -1.35
VAPA-206ENST00000583475 UBASH3BQ8TF42 649 aa6.63□□□□□ -1.35
VAPA-206ENST00000583475 MEGF10Q96KG7 1140 aa6.63□□□□□ -1.35
VAPA-206ENST00000583475 BCO2Q9BYV7 579 aa6.63□□□□□ -1.35
VAPA-206ENST00000583475 TRAK1Q9UPV9 953 aa6.63□□□□□ -1.35
VAPA-206ENST00000583475 NLRP12P59046 1061 aa6.62□□□□□ -1.35
VAPA-206ENST00000583475 ACAD11Q709F0 780 aa6.62□□□□□ -1.35
VAPA-206ENST00000583475 ZNF576Q9H609 170 aa6.62□□□□□ -1.35
VAPA-206ENST00000583475 ANKRD33BA6NCL7 494 aa6.61□□□□□ -1.35
VAPA-206ENST00000583475 ADAM23O75077 832 aa6.61□□□□□ -1.35
VAPA-206ENST00000583475 GSTM4Q03013 218 aa6.61□□□□□ -1.35
VAPA-206ENST00000583475 NXPE4Q6UWF7 544 aa6.61□□□□□ -1.35
VAPA-206ENST00000583475 DNAJC14Q6Y2X3 702 aaPredicted RBP6.61□□□□□ -1.35
VAPA-206ENST00000583475 FBF1Q8TES7 1133 aa6.61□□□□□ -1.35
VAPA-206ENST00000583475 TP53INP1Q96A56 240 aa6.61□□□□□ -1.35
VAPA-206ENST00000583475 UBL7Q96S82 380 aaPredicted RBP6.61□□□□□ -1.35
VAPA-206ENST00000583475 NRSN2Q9GZP1 204 aa6.61□□□□□ -1.35
VAPA-206ENST00000583475 PPP4R2Q9NY27 417 aa6.61□□□□□ -1.35
VAPA-206ENST00000583475 DLGAP3O95886 979 aa6.6□□□□□ -1.35
VAPA-206ENST00000583475 B3GALT4O96024 378 aa6.6□□□□□ -1.35
VAPA-206ENST00000583475 FCGRTP55899 365 aa6.6□□□□□ -1.35
VAPA-206ENST00000583475 RPS26P11Q5JNZ5 115 aaPredicted RBP6.6□□□□□ -1.35
VAPA-206ENST00000583475 ALG1LQ6GMV1 187 aa6.6□□□□□ -1.35
VAPA-206ENST00000583475 OSBPL7Q9BZF2 842 aa6.6□□□□□ -1.35
VAPA-206ENST00000583475 LOC100289279A0A1B0GTE1 492 aa6.59□□□□□ -1.35
VAPA-206ENST00000583475 MEGF11A6BM72 1044 aa6.59□□□□□ -1.35
VAPA-206ENST00000583475 K7ELQ4 463 aaPredicted RBP6.59□□□□□ -1.35
VAPA-206ENST00000583475 LDHBP07195 334 aaKnown RBP6.59□□□□□ -1.35
VAPA-206ENST00000583475 H2AFB1P0C5Y9 115 aa6.59□□□□□ -1.35
VAPA-206ENST00000583475 H2AFB2P0C5Z0 115 aa6.59□□□□□ -1.35
VAPA-206ENST00000583475 GLB1P16278 677 aa6.59□□□□□ -1.35
VAPA-206ENST00000583475 FAAP100Q0VG06 881 aa6.59□□□□□ -1.35
VAPA-206ENST00000583475 COL19A1Q14993 1142 aa6.59□□□□□ -1.35
VAPA-206ENST00000583475 HOMEZQ8IX15 550 aa6.59□□□□□ -1.35
VAPA-206ENST00000583475 DYRK3O43781 588 aa6.58□□□□□ -1.36
VAPA-206ENST00000583475 EIF4EBP3O60516 100 aaPredicted RBP6.58□□□□□ -1.36
VAPA-206ENST00000583475 ITGB7P26010 798 aa6.58□□□□□ -1.36
VAPA-206ENST00000583475 ATP2B2Q01814 1243 aa6.58□□□□□ -1.36
VAPA-206ENST00000583475 DTHD1Q6ZMT9 781 aa6.58□□□□□ -1.36
VAPA-206ENST00000583475 C3orf58Q8NDZ4 430 aa6.58□□□□□ -1.36
VAPA-206ENST00000583475 TRIM56Q9BRZ2 755 aaKnown RBP6.58□□□□□ -1.36
VAPA-206ENST00000583475 RUSC1Q9BVN2 902 aa6.58□□□□□ -1.36
VAPA-206ENST00000583475 USP26Q9BXU7 913 aa6.58□□□□□ -1.36
VAPA-206ENST00000583475 SEMA6BQ9H3T3 888 aa6.58□□□□□ -1.36
VAPA-206ENST00000583475 GIPC1O14908 333 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms