RNA–Protein interactions for RNA: ENST00000583382.1

CDH8-209, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 1,528 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-209ENST00000583382 DNMT3LQ9UJW3 386 aa6.61□□□□□ -1.35
CDH8-209ENST00000583382 BCS1LQ9Y276 419 aa6.61□□□□□ -1.35
CDH8-209ENST00000583382 USP47Q96K76 1375 aa6.61□□□□□ -1.35
CDH8-209ENST00000583382 FAM208AQ9UK61 1670 aaKnown RBP6.61□□□□□ -1.35
CDH8-209ENST00000583382 N4BP2Q86UW6 1770 aaPredicted RBP6.61□□□□□ -1.35
CDH8-209ENST00000583382 FIGNL2A6NMB9 653 aa6.6□□□□□ -1.35
CDH8-209ENST00000583382 DKK1O94907 266 aa6.6□□□□□ -1.35
CDH8-209ENST00000583382 CTCFP49711 727 aaPredicted RBP6.6□□□□□ -1.35
CDH8-209ENST00000583382 RNF144AP50876 292 aaPredicted RBP6.6□□□□□ -1.35
CDH8-209ENST00000583382 TGFB2P61812 414 aa6.6□□□□□ -1.35
CDH8-209ENST00000583382 CENPCQ03188 943 aa6.6□□□□□ -1.35
CDH8-209ENST00000583382 SIX5Q8N196 739 aa6.6□□□□□ -1.35
CDH8-209ENST00000583382 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.6□□□□□ -1.35
CDH8-209ENST00000583382 TPCN2Q8NHX9 752 aa6.6□□□□□ -1.35
CDH8-209ENST00000583382 RNF217Q8TC41 542 aa6.6□□□□□ -1.35
CDH8-209ENST00000583382 DDX54Q8TDD1 881 aaKnown RBP6.6□□□□□ -1.35
CDH8-209ENST00000583382 MPHOSPH9Q99550 1183 aa6.6□□□□□ -1.35
CDH8-209ENST00000583382 SERTAD1Q9UHV2 236 aa6.6□□□□□ -1.35
CDH8-209ENST00000583382 BRCA1P38398 1863 aaKnown RBP6.6□□□□□ -1.35
CDH8-209ENST00000583382 LTN1O94822 1766 aa6.6□□□□□ -1.35
CDH8-209ENST00000583382 KCPQ6ZWJ8 1503 aa6.6□□□□□ -1.35
CDH8-209ENST00000583382 CCDC85CA6NKD9 419 aa6.6□□□□□ -1.35
CDH8-209ENST00000583382 FAM196BA6NMK8 535 aa6.6□□□□□ -1.35
CDH8-209ENST00000583382 USP17L15C9J2P7 530 aa6.6□□□□□ -1.35
CDH8-209ENST00000583382 USP17L10C9JJH3 530 aa6.6□□□□□ -1.35
CDH8-209ENST00000583382 USP17L13C9JLJ4 530 aa6.6□□□□□ -1.35
CDH8-209ENST00000583382 USP17L12C9JPN9 530 aa6.6□□□□□ -1.35
CDH8-209ENST00000583382 USP17L11C9JVI0 530 aa6.6□□□□□ -1.35
CDH8-209ENST00000583382 USP17L21D6R901 530 aa6.6□□□□□ -1.35
CDH8-209ENST00000583382 USP17L18D6R9N7 530 aa6.6□□□□□ -1.35
CDH8-209ENST00000583382 USP17L22D6RA61 530 aa6.6□□□□□ -1.35
CDH8-209ENST00000583382 USP17L17D6RBQ6 530 aa6.6□□□□□ -1.35
CDH8-209ENST00000583382 USP17L19D6RCP7 530 aa6.6□□□□□ -1.35
CDH8-209ENST00000583382 USP17L20D6RJB6 530 aa6.6□□□□□ -1.35
CDH8-209ENST00000583382 MAN1A2O60476 641 aa6.6□□□□□ -1.35
CDH8-209ENST00000583382 USP17L24Q0WX57 530 aa6.6□□□□□ -1.35
CDH8-209ENST00000583382 ZNF787Q6DD87 383 aa6.6□□□□□ -1.35
CDH8-209ENST00000583382 PBXIP1Q96AQ6 731 aa6.6□□□□□ -1.35
CDH8-209ENST00000583382 ZNF358Q9NW07 568 aa6.6□□□□□ -1.35
CDH8-209ENST00000583382 SBF1O95248 1867 aa6.59□□□□□ -1.35
CDH8-209ENST00000583382 UBR3Q6ZT12 1888 aa6.59□□□□□ -1.35
CDH8-209ENST00000583382 TTC21AQ8NDW8 1320 aa6.59□□□□□ -1.35
CDH8-209ENST00000583382 A0A0G2JLW4 131 aa6.59□□□□□ -1.35
CDH8-209ENST00000583382 SFI1A8K8P3 1242 aa6.59□□□□□ -1.35
CDH8-209ENST00000583382 GPC1P35052 558 aa6.59□□□□□ -1.35
CDH8-209ENST00000583382 RGS19P49795 217 aa6.59□□□□□ -1.35
CDH8-209ENST00000583382 LBX1P52954 281 aa6.59□□□□□ -1.35
CDH8-209ENST00000583382 C4BP0C0L5 1744 aa6.59□□□□□ -1.35
CDH8-209ENST00000583382 NFAT5O94916 1531 aa6.58□□□□□ -1.36
CDH8-209ENST00000583382 VEGFAP15692 232 aaPredicted RBP6.58□□□□□ -1.36
CDH8-209ENST00000583382 DPYDQ12882 1025 aa6.58□□□□□ -1.36
CDH8-209ENST00000583382 TLR1Q15399 786 aa6.58□□□□□ -1.36
CDH8-209ENST00000583382 SLC4A9Q96Q91 983 aa6.58□□□□□ -1.36
CDH8-209ENST00000583382 GRIP2Q9C0E4 1043 aa6.58□□□□□ -1.36
CDH8-209ENST00000583382 KIAA1551Q9HCM1 1747 aa6.58□□□□□ -1.36
CDH8-209ENST00000583382 SMTNP53814 917 aa6.57□□□□□ -1.36
CDH8-209ENST00000583382 PRICKLE2Q7Z3G6 844 aa6.57□□□□□ -1.36
CDH8-209ENST00000583382 ANKMY2Q8IV38 441 aa6.57□□□□□ -1.36
CDH8-209ENST00000583382 RNF181Q9P0P0 153 aa6.57□□□□□ -1.36
CDH8-209ENST00000583382 NSD2O96028 1365 aa6.57□□□□□ -1.36
CDH8-209ENST00000583382 BACH1O14867 736 aa6.56□□□□□ -1.36
CDH8-209ENST00000583382 ATG7O95352 703 aa6.56□□□□□ -1.36
CDH8-209ENST00000583382 SSFA2P28290 1259 aa6.56□□□□□ -1.36
CDH8-209ENST00000583382 SEC13P55735 322 aa6.56□□□□□ -1.36
CDH8-209ENST00000583382 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.56□□□□□ -1.36
CDH8-209ENST00000583382 LYSMD3Q7Z3D4 306 aa6.56□□□□□ -1.36
CDH8-209ENST00000583382 AMIGO3Q86WK7 504 aa6.56□□□□□ -1.36
CDH8-209ENST00000583382 ZSCAN10Q96SZ4 725 aaPredicted RBP6.56□□□□□ -1.36
CDH8-209ENST00000583382 CABP1Q9NZU7 370 aa6.56□□□□□ -1.36
CDH8-209ENST00000583382 ZMIZ1Q9ULJ6 1067 aa6.56□□□□□ -1.36
CDH8-209ENST00000583382 NOVA2Q9UNW9 492 aaKnown RBP6.56□□□□□ -1.36
CDH8-209ENST00000583382 PDE4DIPQ5VU43 2346 aa6.56□□□□□ -1.36
CDH8-209ENST00000583382 TTC21BQ7Z4L5 1316 aa6.56□□□□□ -1.36
CDH8-209ENST00000583382 A6NJY4 79 aa6.55□□□□□ -1.36
CDH8-209ENST00000583382 EPHA4P54764 986 aa6.55□□□□□ -1.36
CDH8-209ENST00000583382 MTFR1Q15390 333 aa6.55□□□□□ -1.36
CDH8-209ENST00000583382 PPARGC1BQ86YN6 1023 aaKnown RBP6.55□□□□□ -1.36
CDH8-209ENST00000583382 TSEN2Q8NCE0 465 aaKnown RBP6.55□□□□□ -1.36
CDH8-209ENST00000583382 DCAF11Q8TEB1 546 aa6.55□□□□□ -1.36
CDH8-209ENST00000583382 ANKRD24Q8TF21 1146 aa6.55□□□□□ -1.36
CDH8-209ENST00000583382 SMARCC1Q92922 1105 aaPredicted RBP6.55□□□□□ -1.36
CDH8-209ENST00000583382 CCDC87Q9NVE4 849 aa6.55□□□□□ -1.36
CDH8-209ENST00000583382 RBM19Q9Y4C8 960 aaKnown RBP6.55□□□□□ -1.36
CDH8-209ENST00000583382 USP3Q9Y6I4 520 aa6.55□□□□□ -1.36
CDH8-209ENST00000583382 VIRMAQ69YN4 1812 aaKnown RBP6.55□□□□□ -1.36
CDH8-209ENST00000583382 TOGARAM1Q9Y4F4 1720 aa6.55□□□□□ -1.36
CDH8-209ENST00000583382 CCDC88AQ3V6T2 1871 aa6.55□□□□□ -1.36
CDH8-209ENST00000583382 M0R2N6 131 aa6.55□□□□□ -1.36
CDH8-209ENST00000583382 DPEP1P16444 411 aa6.55□□□□□ -1.36
CDH8-209ENST00000583382 RHOQP17081 205 aa6.55□□□□□ -1.36
CDH8-209ENST00000583382 POU4F2Q12837 409 aa6.55□□□□□ -1.36
CDH8-209ENST00000583382 ELOAQ14241 798 aaKnown RBP6.55□□□□□ -1.36
CDH8-209ENST00000583382 ZCRB1Q8TBF4 217 aaKnown RBP6.55□□□□□ -1.36
CDH8-209ENST00000583382 STK32AQ8WU08 396 aa6.55□□□□□ -1.36
CDH8-209ENST00000583382 PIM2Q9P1W9 311 aa6.55□□□□□ -1.36
CDH8-209ENST00000583382 IQSEC3Q9UPP2 1182 aaPredicted RBP6.55□□□□□ -1.36
CDH8-209ENST00000583382 PALLDQ8WX93 1383 aa6.54□□□□□ -1.36
CDH8-209ENST00000583382 SPATA31C2B4DYI2 1134 aa6.54□□□□□ -1.36
CDH8-209ENST00000583382 LGR5O75473 907 aa6.54□□□□□ -1.36
CDH8-209ENST00000583382 MMP10P09238 476 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms