RNA–Protein interactions for RNA: ENST00000583226.1

NCOR1-223, Transcript of nuclear receptor corepressor 1, human

TSL 5

Gene NCOR1, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCOR1-223	ENST00000583226	ITGB4	P16144	1822 aa		10.91	□□□□□ -0.66
NCOR1-223	ENST00000583226	GLTPD2	A6NH11	291 aa		10.91	□□□□□ -0.66
NCOR1-223	ENST00000583226	CYP27B1	O15528	508 aa		10.91	□□□□□ -0.66
NCOR1-223	ENST00000583226	OXLD1	Q5BKU9	147 aa		10.91	□□□□□ -0.66
NCOR1-223	ENST00000583226	LCE2C	Q5TA81	110 aa		10.91	□□□□□ -0.66
NCOR1-223	ENST00000583226	FOXD4L5	Q5VV16	416 aa	Predicted RBP	10.91	□□□□□ -0.66
NCOR1-223	ENST00000583226	NPAS3	Q8IXF0	933 aa		10.91	□□□□□ -0.66
NCOR1-223	ENST00000583226	IRF7	Q92985	503 aa		10.91	□□□□□ -0.66
NCOR1-223	ENST00000583226	RTL1	A6NKG5	1358 aa		10.9	□□□□□ -0.66
NCOR1-223	ENST00000583226	C4A	P0C0L4	1744 aa		10.9	□□□□□ -0.66
NCOR1-223	ENST00000583226	PDE4DIP	Q5VU43	2346 aa		10.9	□□□□□ -0.66
NCOR1-223	ENST00000583226		A0A1W2PRU2	124 aa		10.9	□□□□□ -0.66
NCOR1-223	ENST00000583226	PPFIA3	O75145	1194 aa		10.9	□□□□□ -0.66
NCOR1-223	ENST00000583226	CTCF	P49711	727 aa	Predicted RBP	10.9	□□□□□ -0.66
NCOR1-223	ENST00000583226	ITPK1	Q13572	414 aa		10.9	□□□□□ -0.66
NCOR1-223	ENST00000583226	TRAPPC3L	Q5T215	181 aa		10.9	□□□□□ -0.66
NCOR1-223	ENST00000583226	OSBPL3	Q9H4L5	887 aa		10.9	□□□□□ -0.66
NCOR1-223	ENST00000583226	ARHGEF10L	Q9HCE6	1279 aa		10.9	□□□□□ -0.66
NCOR1-223	ENST00000583226	RAB6B	Q9NRW1	208 aa		10.9	□□□□□ -0.66
NCOR1-223	ENST00000583226	TERF2IP	Q9NYB0	399 aa		10.9	□□□□□ -0.66
NCOR1-223	ENST00000583226	PARP3	Q9Y6F1	533 aa		10.9	□□□□□ -0.66
NCOR1-223	ENST00000583226	KDM6A	O15550	1401 aa	Predicted RBP	10.9	□□□□□ -0.66
NCOR1-223	ENST00000583226	ERBB4	Q15303	1308 aa		10.89	□□□□□ -0.67
NCOR1-223	ENST00000583226	PRICKLE2	Q7Z3G6	844 aa		10.89	□□□□□ -0.67
NCOR1-223	ENST00000583226	USHBP1	Q8N6Y0	703 aa		10.89	□□□□□ -0.67
NCOR1-223	ENST00000583226	TMC1	Q8TDI8	760 aa		10.89	□□□□□ -0.67
NCOR1-223	ENST00000583226	NLRP3	Q96P20	1036 aa		10.89	□□□□□ -0.67
NCOR1-223	ENST00000583226	SLC12A5	Q9H2X9	1139 aa		10.89	□□□□□ -0.67
NCOR1-223	ENST00000583226	RTCB	Q9Y3I0	505 aa	Known RBP	10.89	□□□□□ -0.67
NCOR1-223	ENST00000583226		A0A1W2PP64	1363 aa		10.89	□□□□□ -0.67
NCOR1-223	ENST00000583226	GYS1	P13807	737 aa		10.88	□□□□□ -0.67
NCOR1-223	ENST00000583226	GMPR	P36959	345 aa		10.88	□□□□□ -0.67
NCOR1-223	ENST00000583226	RGS19	P49795	217 aa		10.88	□□□□□ -0.67
NCOR1-223	ENST00000583226	LYSMD3	Q7Z3D4	306 aa		10.88	□□□□□ -0.67
NCOR1-223	ENST00000583226	ABHD8	Q96I13	439 aa		10.88	□□□□□ -0.67
NCOR1-223	ENST00000583226	COG3	Q96JB2	828 aa		10.88	□□□□□ -0.67
NCOR1-223	ENST00000583226	MKRN1	Q9UHC7	482 aa	Known RBP	10.88	□□□□□ -0.67
NCOR1-223	ENST00000583226	SMG6	Q86US8	1419 aa	Known RBP	10.87	□□□□□ -0.67
NCOR1-223	ENST00000583226	RHOQ	P17081	205 aa		10.87	□□□□□ -0.67
NCOR1-223	ENST00000583226	LMNB1	P20700	586 aa		10.87	□□□□□ -0.67
NCOR1-223	ENST00000583226	FBLN1	P23142	703 aa		10.87	□□□□□ -0.67
NCOR1-223	ENST00000583226	SOX11	P35716	441 aa		10.87	□□□□□ -0.67
NCOR1-223	ENST00000583226	MLLT1	Q03111	559 aa	Predicted RBP	10.87	□□□□□ -0.67
NCOR1-223	ENST00000583226	PHTF2	Q8N3S3	785 aa		10.87	□□□□□ -0.67
NCOR1-223	ENST00000583226	AIDA	Q96BJ3	306 aa		10.87	□□□□□ -0.67
NCOR1-223	ENST00000583226	ASAP1	Q9ULH1	1129 aa		10.87	□□□□□ -0.67
NCOR1-223	ENST00000583226	CNTNAP1	P78357	1384 aa		10.87	□□□□□ -0.67
NCOR1-223	ENST00000583226	RFC4	P35249	363 aa		10.86	□□□□□ -0.67
NCOR1-223	ENST00000583226	CCDC155	Q8N6L0	562 aa		10.86	□□□□□ -0.67
NCOR1-223	ENST00000583226	TMOD3	Q9NYL9	352 aa		10.86	□□□□□ -0.67
NCOR1-223	ENST00000583226	ROCK2	O75116	1388 aa	Known RBP	10.86	□□□□□ -0.67
NCOR1-223	ENST00000583226	TRAK2	O60296	914 aa		10.85	□□□□□ -0.67
NCOR1-223	ENST00000583226	USP4	Q13107	963 aa		10.85	□□□□□ -0.67
NCOR1-223	ENST00000583226	CLUAP1	Q96AJ1	413 aa		10.85	□□□□□ -0.67
NCOR1-223	ENST00000583226	PUS7	Q96PZ0	661 aa	Known RBP	10.85	□□□□□ -0.67
NCOR1-223	ENST00000583226	RPS6KA4	O75676	772 aa		10.84	□□□□□ -0.67
NCOR1-223	ENST00000583226	CHRNA5	P30532	468 aa		10.84	□□□□□ -0.67
NCOR1-223	ENST00000583226	RNF144A	P50876	292 aa	Predicted RBP	10.84	□□□□□ -0.67
NCOR1-223	ENST00000583226	LBX1	P52954	281 aa		10.84	□□□□□ -0.67
NCOR1-223	ENST00000583226	RASSF7	Q02833	373 aa		10.84	□□□□□ -0.67
NCOR1-223	ENST00000583226	PLPP7	Q8NBV4	271 aa		10.84	□□□□□ -0.67
NCOR1-223	ENST00000583226	L3MBTL2	Q969R5	705 aa		10.84	□□□□□ -0.67
NCOR1-223	ENST00000583226	INSR	P06213	1382 aa		10.84	□□□□□ -0.67
NCOR1-223	ENST00000583226	TNRC18	O15417	2968 aa	Predicted RBP	10.84	□□□□□ -0.67
NCOR1-223	ENST00000583226	CNTNAP4	Q9C0A0	1308 aa		10.84	□□□□□ -0.67
NCOR1-223	ENST00000583226	KDR	P35968	1356 aa		10.83	□□□□□ -0.68
NCOR1-223	ENST00000583226	POM121C	A8CG34	1229 aa		10.83	□□□□□ -0.68
NCOR1-223	ENST00000583226	PIK3CD	O00329	1044 aa		10.83	□□□□□ -0.68
NCOR1-223	ENST00000583226	RRS1	Q15050	365 aa	Known RBP	10.83	□□□□□ -0.68
NCOR1-223	ENST00000583226	ATG3	Q9NT62	314 aa		10.83	□□□□□ -0.68
NCOR1-223	ENST00000583226	ZNF831	Q5JPB2	1677 aa		10.82	□□□□□ -0.68
NCOR1-223	ENST00000583226	CDC14C	A4D256	554 aa		10.82	□□□□□ -0.68
NCOR1-223	ENST00000583226	SLC35F4	A4IF30	521 aa		10.82	□□□□□ -0.68
NCOR1-223	ENST00000583226	STAU1	O95793	577 aa	Known RBP	10.82	□□□□□ -0.68
NCOR1-223	ENST00000583226	GNRH1	P01148	92 aa		10.82	□□□□□ -0.68
NCOR1-223	ENST00000583226	CLN3	Q13286	438 aa		10.82	□□□□□ -0.68
NCOR1-223	ENST00000583226	SPG7	Q9UQ90	795 aa		10.82	□□□□□ -0.68
NCOR1-223	ENST00000583226	KIF24	Q5T7B8	1368 aa		10.81	□□□□□ -0.68
NCOR1-223	ENST00000583226	WIPF1	O43516	503 aa		10.81	□□□□□ -0.68
NCOR1-223	ENST00000583226	SKI	P12755	728 aa		10.81	□□□□□ -0.68
NCOR1-223	ENST00000583226	DDR1	Q08345	913 aa		10.81	□□□□□ -0.68
NCOR1-223	ENST00000583226	HSP90AB2P	Q58FF8	381 aa		10.81	□□□□□ -0.68
NCOR1-223	ENST00000583226	CNKSR1	Q969H4	720 aa		10.81	□□□□□ -0.68
NCOR1-223	ENST00000583226	SLC4A9	Q96Q91	983 aa		10.81	□□□□□ -0.68
NCOR1-223	ENST00000583226	PASK	Q96RG2	1323 aa		10.81	□□□□□ -0.68
NCOR1-223	ENST00000583226	HSPA8	P11142	646 aa	Known RBP	10.8	□□□□□ -0.68
NCOR1-223	ENST00000583226	GPC1	P35052	558 aa		10.8	□□□□□ -0.68
NCOR1-223	ENST00000583226	POU4F2	Q12837	409 aa		10.8	□□□□□ -0.68
NCOR1-223	ENST00000583226	MAP7D1	Q3KQU3	841 aa		10.8	□□□□□ -0.68
NCOR1-223	ENST00000583226	ALG2	Q9H553	416 aa		10.8	□□□□□ -0.68
NCOR1-223	ENST00000583226	NCAPD2	Q15021	1401 aa		10.8	□□□□□ -0.68
NCOR1-223	ENST00000583226	FLT4	P35916	1363 aa		10.79	□□□□□ -0.68
NCOR1-223	ENST00000583226	TIAM2	Q8IVF5	1701 aa		10.79	□□□□□ -0.68
NCOR1-223	ENST00000583226	POLRMT	O00411	1230 aa	Known RBP	10.79	□□□□□ -0.68
NCOR1-223	ENST00000583226	IL2RA	P01589	272 aa		10.79	□□□□□ -0.68
NCOR1-223	ENST00000583226	INSM1	Q01101	510 aa	Predicted RBP	10.79	□□□□□ -0.68
NCOR1-223	ENST00000583226	MYH14	Q7Z406	1995 aa	Known RBP	10.79	□□□□□ -0.68
NCOR1-223	ENST00000583226	USP42	Q9H9J4	1324 aa	Known RBP	10.79	□□□□□ -0.68
NCOR1-223	ENST00000583226	COL5A3	P25940	1745 aa	Predicted RBP	10.78	□□□□□ -0.68
NCOR1-223	ENST00000583226	CCDC85C	A6NKD9	419 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms