RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 DNAI1Q9UI46 699 aa18.6■□□□□ 0.57
ERBB2-214ENST00000583038 LRRC59Q96AG4 307 aaKnown RBP18.6■□□□□ 0.57
ERBB2-214ENST00000583038 TTC12Q9H892 705 aaPredicted RBP18.6■□□□□ 0.57
ERBB2-214ENST00000583038 CCDC155Q8N6L0 562 aa18.6■□□□□ 0.57
ERBB2-214ENST00000583038 SMARCC2Q8TAQ2 1214 aa18.6■□□□□ 0.57
ERBB2-214ENST00000583038 BICD1Q96G01 975 aa18.6■□□□□ 0.57
ERBB2-214ENST00000583038 IQSEC3Q9UPP2 1182 aaPredicted RBP18.6■□□□□ 0.57
ERBB2-214ENST00000583038 KIF5AQ12840 1032 aa18.6■□□□□ 0.57
ERBB2-214ENST00000583038 KRT222Q8N1A0 295 aa18.6■□□□□ 0.57
ERBB2-214ENST00000583038 HSF2BPO75031 334 aa18.59■□□□□ 0.57
ERBB2-214ENST00000583038 TFCP2Q12800 502 aa18.59■□□□□ 0.57
ERBB2-214ENST00000583038 DHX58Q96C10 678 aa18.59■□□□□ 0.57
ERBB2-214ENST00000583038 HS2ST1Q7LGA3 356 aa18.59■□□□□ 0.57
ERBB2-214ENST00000583038 PKNOX2Q96KN3 472 aa18.59■□□□□ 0.57
ERBB2-214ENST00000583038 EDC4Q6P2E9 1401 aaKnown RBP18.58■□□□□ 0.57
ERBB2-214ENST00000583038 SBNO1A3KN83 1393 aa18.58■□□□□ 0.57
ERBB2-214ENST00000583038 SPDYE3A6NKU9 549 aa18.58■□□□□ 0.57
ERBB2-214ENST00000583038 SLU7O95391 586 aaKnown RBP18.58■□□□□ 0.57
ERBB2-214ENST00000583038 CHMP4BP1P59074 171 aa18.58■□□□□ 0.57
ERBB2-214ENST00000583038 PARP10Q53GL7 1025 aa18.58■□□□□ 0.56
ERBB2-214ENST00000583038 TMEM87BQ96K49 555 aa18.58■□□□□ 0.56
ERBB2-214ENST00000583038 CDCA7Q9BWT1 371 aaPredicted RBP18.58■□□□□ 0.56
ERBB2-214ENST00000583038 MCM9Q9NXL9 1143 aa18.58■□□□□ 0.56
ERBB2-214ENST00000583038 EYA2O00167 538 aa18.58■□□□□ 0.56
ERBB2-214ENST00000583038 TMX1Q9H3N1 280 aa18.58■□□□□ 0.56
ERBB2-214ENST00000583038 RTCBQ9Y3I0 505 aaKnown RBP18.58■□□□□ 0.56
ERBB2-214ENST00000583038 LMOD1P29536 600 aaPredicted RBP18.57■□□□□ 0.56
ERBB2-214ENST00000583038 APOBRQ0VD83 1088 aa18.57■□□□□ 0.56
ERBB2-214ENST00000583038 LLPHQ9BRT6 129 aaKnown RBP18.57■□□□□ 0.56
ERBB2-214ENST00000583038 RASAL2Q9UJF2 1139 aa18.57■□□□□ 0.56
ERBB2-214ENST00000583038 PRIM1P49642 420 aaKnown RBP18.57■□□□□ 0.56
ERBB2-214ENST00000583038 RILPL1Q5EBL4 403 aa18.57■□□□□ 0.56
ERBB2-214ENST00000583038 PLBD2Q8NHP8 589 aa18.57■□□□□ 0.56
ERBB2-214ENST00000583038 EYA3Q99504 573 aa18.57■□□□□ 0.56
ERBB2-214ENST00000583038 KIAA0556O60303 1618 aa18.57■□□□□ 0.56
ERBB2-214ENST00000583038 RNF187Q5TA31 235 aaPredicted RBP18.57■□□□□ 0.56
ERBB2-214ENST00000583038 TTC6Q86TZ1 520 aa18.57■□□□□ 0.56
ERBB2-214ENST00000583038 CCDC42Q96M95 316 aa18.57■□□□□ 0.56
ERBB2-214ENST00000583038 PUF60Q9UHX1 559 aaKnown RBP18.57■□□□□ 0.56
ERBB2-214ENST00000583038 CTAGE9A4FU28 777 aa18.57■□□□□ 0.56
ERBB2-214ENST00000583038 DTHD1Q6ZMT9 781 aa18.57■□□□□ 0.56
ERBB2-214ENST00000583038 CCDC77Q9BR77 488 aa18.57■□□□□ 0.56
ERBB2-214ENST00000583038 IMPG2Q9BZV3 1241 aa18.57■□□□□ 0.56
ERBB2-214ENST00000583038 DENND2AQ9ULE3 1009 aa18.57■□□□□ 0.56
ERBB2-214ENST00000583038 IKBKGQ9Y6K9 419 aa18.57■□□□□ 0.56
ERBB2-214ENST00000583038 IBSPP21815 317 aaPredicted RBP18.56■□□□□ 0.56
ERBB2-214ENST00000583038 GIMAP7Q8NHV1 300 aa18.56■□□□□ 0.56
ERBB2-214ENST00000583038 HOMER2Q9NSB8 354 aa18.56■□□□□ 0.56
ERBB2-214ENST00000583038 TNNQ9UQP3 1299 aa18.56■□□□□ 0.56
ERBB2-214ENST00000583038 WDR62O43379 1518 aa18.56■□□□□ 0.56
ERBB2-214ENST00000583038 NF2P35240 595 aa18.56■□□□□ 0.56
ERBB2-214ENST00000583038 MAGEB6Q8N7X4 407 aa18.56■□□□□ 0.56
ERBB2-214ENST00000583038 BICC1Q9H694 974 aaKnown RBP18.56■□□□□ 0.56
ERBB2-214ENST00000583038 ZSWIM4Q9H7M6 989 aa18.56■□□□□ 0.56
ERBB2-214ENST00000583038 LDHBP07195 334 aaKnown RBP18.56■□□□□ 0.56
ERBB2-214ENST00000583038 CHL1O00533 1208 aa18.55■□□□□ 0.56
ERBB2-214ENST00000583038 KRT24Q2M2I5 525 aa18.55■□□□□ 0.56
ERBB2-214ENST00000583038 MMRN2Q9H8L6 949 aa18.55■□□□□ 0.56
ERBB2-214ENST00000583038 CERS3Q8IU89 383 aa18.55■□□□□ 0.56
ERBB2-214ENST00000583038 METTL22Q9BUU2 404 aaPredicted RBP18.55■□□□□ 0.56
ERBB2-214ENST00000583038 ELP1O95163 1332 aa18.55■□□□□ 0.56
ERBB2-214ENST00000583038 OPA1O60313 960 aa18.55■□□□□ 0.56
ERBB2-214ENST00000583038 FAM160A1Q05DH4 1040 aa18.55■□□□□ 0.56
ERBB2-214ENST00000583038 SLC4A8Q2Y0W8 1093 aa18.55■□□□□ 0.56
ERBB2-214ENST00000583038 CTTNBP2Q8WZ74 1663 aa18.55■□□□□ 0.56
ERBB2-214ENST00000583038 GTF2F1P35269 517 aaKnown RBP eCLIP18.54■□□□□ 0.56
ERBB2-214ENST00000583038 CNGA4Q8IV77 575 aa18.54■□□□□ 0.56
ERBB2-214ENST00000583038 LMAN1P49257 510 aa18.54■□□□□ 0.56
ERBB2-214ENST00000583038 UBE4AQ14139 1066 aa18.54■□□□□ 0.56
ERBB2-214ENST00000583038 MYL5Q02045 173 aa18.54■□□□□ 0.56
ERBB2-214ENST00000583038 ZNF790Q6PG37 636 aa18.54■□□□□ 0.56
ERBB2-214ENST00000583038 ACSBG1Q96GR2 724 aa18.54■□□□□ 0.56
ERBB2-214ENST00000583038 STMN4Q9H169 189 aaPredicted RBP18.54■□□□□ 0.56
ERBB2-214ENST00000583038 PHACTR2O75167 634 aa18.54■□□□□ 0.56
ERBB2-214ENST00000583038 IL13P35225 146 aa18.54■□□□□ 0.56
ERBB2-214ENST00000583038 TRMT1LQ7Z2T5 733 aaKnown RBP18.54■□□□□ 0.56
ERBB2-214ENST00000583038 GOLGA1Q92805 767 aa18.54■□□□□ 0.56
ERBB2-214ENST00000583038 NSFL1CQ9UNZ2 370 aaKnown RBP18.54■□□□□ 0.56
ERBB2-214ENST00000583038 PPP2R5BQ15173 497 aa18.53■□□□□ 0.56
ERBB2-214ENST00000583038 SH3TC1Q8TE82 1336 aa18.53■□□□□ 0.56
ERBB2-214ENST00000583038 NEK11Q8NG66 645 aa18.53■□□□□ 0.56
ERBB2-214ENST00000583038 LUC7L2Q9Y383 392 aaKnown RBP18.53■□□□□ 0.56
ERBB2-214ENST00000583038 RPS6KB1P23443 525 aa18.53■□□□□ 0.56
ERBB2-214ENST00000583038 TNNI2P48788 182 aa18.53■□□□□ 0.56
ERBB2-214ENST00000583038 LRRC45Q96CN5 670 aa18.53■□□□□ 0.56
ERBB2-214ENST00000583038 TSNARE1Q96NA8 513 aa18.53■□□□□ 0.56
ERBB2-214ENST00000583038 RPL13P26373 211 aaKnown RBP18.53■□□□□ 0.56
ERBB2-214ENST00000583038 ATP2A1O14983 1001 aa18.52■□□□□ 0.56
ERBB2-214ENST00000583038 KCNA6P17658 529 aa18.52■□□□□ 0.56
ERBB2-214ENST00000583038 APPBP2Q92624 585 aa18.52■□□□□ 0.56
ERBB2-214ENST00000583038 ZMYM3Q14202 1370 aa18.52■□□□□ 0.56
ERBB2-214ENST00000583038 PLCD1P51178 756 aa18.52■□□□□ 0.56
ERBB2-214ENST00000583038 PICALMQ13492 652 aa18.52■□□□□ 0.56
ERBB2-214ENST00000583038 GLT8D2Q9H1C3 349 aa18.52■□□□□ 0.56
ERBB2-214ENST00000583038 SYNCQ9H7C4 482 aa18.52■□□□□ 0.56
ERBB2-214ENST00000583038 C6orf163Q5TEZ5 329 aa18.52■□□□□ 0.55
ERBB2-214ENST00000583038 SBNO2Q9Y2G9 1366 aa18.52■□□□□ 0.55
ERBB2-214ENST00000583038 FAM13AO94988 1023 aa18.52■□□□□ 0.55
ERBB2-214ENST00000583038 DEXIO95424 95 aa18.52■□□□□ 0.55
ERBB2-214ENST00000583038 NSRP1Q9H0G5 558 aaKnown RBP18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms