RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 ICE2Q659A1 982 aa12.2□□□□□ -0.46
TOP3A-214ENST00000582981 HOMER1Q86YM7 354 aa12.2□□□□□ -0.46
TOP3A-214ENST00000582981 METTL22Q9BUU2 404 aaPredicted RBP12.2□□□□□ -0.46
TOP3A-214ENST00000582981 ARGLU1Q9NWB6 273 aaPredicted RBP12.2□□□□□ -0.46
TOP3A-214ENST00000582981 ADD1P35611 737 aaKnown RBP12.19□□□□□ -0.46
TOP3A-214ENST00000582981 SNW1Q13573 536 aaKnown RBP12.19□□□□□ -0.46
TOP3A-214ENST00000582981 SART3Q15020 963 aaKnown RBP12.19□□□□□ -0.46
TOP3A-214ENST00000582981 DPCR1Q3MIW9 517 aa12.19□□□□□ -0.46
TOP3A-214ENST00000582981 AMOTQ4VCS5 1084 aa12.19□□□□□ -0.46
TOP3A-214ENST00000582981 EP400NLQ6ZTU2 488 aa12.19□□□□□ -0.46
TOP3A-214ENST00000582981 FAM177A1Q8N128 213 aaPredicted RBP12.19□□□□□ -0.46
TOP3A-214ENST00000582981 UBXN4Q92575 508 aa12.19□□□□□ -0.46
TOP3A-214ENST00000582981 GEMIN8Q9NWZ8 242 aaKnown RBP12.19□□□□□ -0.46
TOP3A-214ENST00000582981 CWC15Q9P013 229 aaKnown RBP12.19□□□□□ -0.46
TOP3A-214ENST00000582981 CACNA1FO60840 1977 aa12.19□□□□□ -0.46
TOP3A-214ENST00000582981 RFX5P48382 616 aaPredicted RBP12.19□□□□□ -0.46
TOP3A-214ENST00000582981 FAM193AP78312 1265 aa12.19□□□□□ -0.46
TOP3A-214ENST00000582981 ILDR1Q86SU0 546 aaPredicted RBP12.19□□□□□ -0.46
TOP3A-214ENST00000582981 GOLGA6L1Q8N7Z2 621 aa12.19□□□□□ -0.46
TOP3A-214ENST00000582981 CLIC4Q9Y696 253 aa12.19□□□□□ -0.46
TOP3A-214ENST00000582981 ERBB3P21860 1342 aa12.19□□□□□ -0.46
TOP3A-214ENST00000582981 ATP5JP18859 108 aa12.18□□□□□ -0.46
TOP3A-214ENST00000582981 OAS2P29728 719 aaKnown RBP12.18□□□□□ -0.46
TOP3A-214ENST00000582981 KCNH5Q8NCM2 988 aa12.18□□□□□ -0.46
TOP3A-214ENST00000582981 UBE2Q2LH0YL09 131 aa12.18□□□□□ -0.46
TOP3A-214ENST00000582981 A1BGP04217 495 aa12.18□□□□□ -0.46
TOP3A-214ENST00000582981 NDUFA8P51970 172 aa12.18□□□□□ -0.46
TOP3A-214ENST00000582981 NYAP1Q6ZVC0 841 aa12.18□□□□□ -0.46
TOP3A-214ENST00000582981 NKX2-3Q8TAU0 364 aa12.18□□□□□ -0.46
TOP3A-214ENST00000582981 EPC1Q9H2F5 836 aa12.18□□□□□ -0.46
TOP3A-214ENST00000582981 HMG20BQ9P0W2 317 aa12.18□□□□□ -0.46
TOP3A-214ENST00000582981 LTN1O94822 1766 aa12.18□□□□□ -0.46
TOP3A-214ENST00000582981 ANKRD65E5RJM6 399 aa12.18□□□□□ -0.46
TOP3A-214ENST00000582981 E7EWF7 191 aa12.18□□□□□ -0.46
TOP3A-214ENST00000582981 M0R2C6 588 aa12.18□□□□□ -0.46
TOP3A-214ENST00000582981 H2AFXP16104 143 aaPredicted RBP12.18□□□□□ -0.46
TOP3A-214ENST00000582981 LMOD1P29536 600 aaPredicted RBP12.18□□□□□ -0.46
TOP3A-214ENST00000582981 GNL2Q13823 731 aaKnown RBP12.18□□□□□ -0.46
TOP3A-214ENST00000582981 CCAR2Q8N163 923 aaKnown RBP12.18□□□□□ -0.46
TOP3A-214ENST00000582981 MNS1Q8NEH6 495 aa12.18□□□□□ -0.46
TOP3A-214ENST00000582981 PAG1Q9NWQ8 432 aa12.18□□□□□ -0.46
TOP3A-214ENST00000582981 PCDHA7Q9UN72 937 aa12.18□□□□□ -0.46
TOP3A-214ENST00000582981 RRP15Q9Y3B9 282 aaKnown RBP12.18□□□□□ -0.46
TOP3A-214ENST00000582981 ADORA1P30542 326 aa12.17□□□□□ -0.46
TOP3A-214ENST00000582981 E2F4Q16254 413 aa12.17□□□□□ -0.46
TOP3A-214ENST00000582981 TMC6Q7Z403 805 aa12.17□□□□□ -0.46
TOP3A-214ENST00000582981 DHX40Q8IX18 779 aaKnown RBP12.17□□□□□ -0.46
TOP3A-214ENST00000582981 SLC52A2Q9HAB3 445 aa12.17□□□□□ -0.46
TOP3A-214ENST00000582981 U3KPZ7 1027 aaPredicted RBP12.17□□□□□ -0.46
TOP3A-214ENST00000582981 HSPD1P10809 573 aaKnown RBP12.17□□□□□ -0.46
TOP3A-214ENST00000582981 STK38Q15208 465 aa12.17□□□□□ -0.46
TOP3A-214ENST00000582981 SKIDA1Q1XH10 827 aa12.17□□□□□ -0.46
TOP3A-214ENST00000582981 DHX32Q7L7V1 743 aaKnown RBP12.17□□□□□ -0.46
TOP3A-214ENST00000582981 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.17□□□□□ -0.46
TOP3A-214ENST00000582981 YY1AP1Q9H869 796 aa12.17□□□□□ -0.46
TOP3A-214ENST00000582981 CFAP45Q9UL16 551 aa12.17□□□□□ -0.46
TOP3A-214ENST00000582981 IFIT1P09914 478 aaKnown RBP12.16□□□□□ -0.46
TOP3A-214ENST00000582981 STX1AQ16623 288 aa12.16□□□□□ -0.46
TOP3A-214ENST00000582981 SPECC1Q5M775 1068 aa12.16□□□□□ -0.46
TOP3A-214ENST00000582981 KRT28Q7Z3Y7 464 aa12.16□□□□□ -0.46
TOP3A-214ENST00000582981 ANKLE2Q86XL3 938 aa12.16□□□□□ -0.46
TOP3A-214ENST00000582981 SYNE4Q8N205 404 aa12.16□□□□□ -0.46
TOP3A-214ENST00000582981 IFNKQ9P0W0 207 aa12.16□□□□□ -0.46
TOP3A-214ENST00000582981 MAST3O60307 1309 aa12.16□□□□□ -0.46
TOP3A-214ENST00000582981 KRT32Q14532 448 aa12.16□□□□□ -0.46
TOP3A-214ENST00000582981 KBTBD3Q8NAB2 608 aa12.16□□□□□ -0.46
TOP3A-214ENST00000582981 OSBP2Q969R2 916 aa12.16□□□□□ -0.46
TOP3A-214ENST00000582981 INCENPQ9NQS7 918 aa12.16□□□□□ -0.46
TOP3A-214ENST00000582981 JRKLQ9Y4A0 524 aa12.16□□□□□ -0.46
TOP3A-214ENST00000582981 ATP1A3P13637 1013 aa12.16□□□□□ -0.46
TOP3A-214ENST00000582981 FDPSP14324 419 aaKnown RBP12.16□□□□□ -0.46
TOP3A-214ENST00000582981 PDIA3P30101 505 aaKnown RBP12.16□□□□□ -0.46
TOP3A-214ENST00000582981 SCARF1Q14162 830 aa12.16□□□□□ -0.46
TOP3A-214ENST00000582981 MUM1L1Q5H9M0 696 aa12.16□□□□□ -0.46
TOP3A-214ENST00000582981 MYCBPQ99417 103 aaPredicted RBP12.16□□□□□ -0.46
TOP3A-214ENST00000582981 MYL10Q9BUA6 226 aa12.16□□□□□ -0.46
TOP3A-214ENST00000582981 COPRSQ9NQ92 184 aa12.16□□□□□ -0.46
TOP3A-214ENST00000582981 KAT6BQ8WYB5 2073 aa12.16□□□□□ -0.46
TOP3A-214ENST00000582981 CYP27B1O15528 508 aa12.15□□□□□ -0.46
TOP3A-214ENST00000582981 ZRSR1Q15695 479 aaKnown RBP12.15□□□□□ -0.46
TOP3A-214ENST00000582981 CCDC82Q8N4S0 544 aa12.15□□□□□ -0.46
TOP3A-214ENST00000582981 AK7Q96M32 723 aa12.15□□□□□ -0.46
TOP3A-214ENST00000582981 HAUS7Q99871 368 aa12.15□□□□□ -0.46
TOP3A-214ENST00000582981 XPO4Q9C0E2 1151 aaKnown RBP12.15□□□□□ -0.46
TOP3A-214ENST00000582981 KLF18A0A0U1RQI7 1052 aa12.15□□□□□ -0.46
TOP3A-214ENST00000582981 A0A1B0GUL7 405 aa12.15□□□□□ -0.46
TOP3A-214ENST00000582981 GOLGA8BA8MQT2 603 aa12.15□□□□□ -0.46
TOP3A-214ENST00000582981 PFKFB2O60825 505 aa12.15□□□□□ -0.46
TOP3A-214ENST00000582981 USPL1Q5W0Q7 1092 aa12.15□□□□□ -0.46
TOP3A-214ENST00000582981 RBM43Q6ZSC3 357 aaKnown RBP12.15□□□□□ -0.46
TOP3A-214ENST00000582981 SRLQ86TD4 932 aa12.15□□□□□ -0.46
TOP3A-214ENST00000582981 KIF28PB7ZC32 967 aa12.15□□□□□ -0.47
TOP3A-214ENST00000582981 PHKG2P15735 406 aa12.15□□□□□ -0.47
TOP3A-214ENST00000582981 CCZ1BP86790 482 aa12.15□□□□□ -0.47
TOP3A-214ENST00000582981 CCZ1P86791 482 aaPredicted RBP12.15□□□□□ -0.47
TOP3A-214ENST00000582981 SMC1AQ14683 1233 aaKnown RBP12.15□□□□□ -0.47
TOP3A-214ENST00000582981 TTC31Q49AM3 519 aaPredicted RBP12.15□□□□□ -0.47
TOP3A-214ENST00000582981 DNAI1Q9UI46 699 aa12.15□□□□□ -0.47
TOP3A-214ENST00000582981 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.15□□□□□ -0.477e-6■■■■□ 21
TOP3A-214ENST00000582981 MARF1Q9Y4F3 1742 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms