RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 AIMP1Q12904 312 aaKnown RBP11.04□□□□□ -0.64
PDLIM1P3-201ENST00000582370 HDGFL1Q5TGJ6 251 aa11.04□□□□□ -0.64
PDLIM1P3-201ENST00000582370 FAM89AQ96GI7 184 aa11.04□□□□□ -0.64
PDLIM1P3-201ENST00000582370 CHMP4BQ9H444 224 aaKnown RBP11.04□□□□□ -0.64
PDLIM1P3-201ENST00000582370 PTCH2Q9Y6C5 1203 aa11.04□□□□□ -0.64
PDLIM1P3-201ENST00000582370 XDHP47989 1333 aa11.04□□□□□ -0.64
PDLIM1P3-201ENST00000582370 MED23Q9ULK4 1368 aa11.03□□□□□ -0.64
PDLIM1P3-201ENST00000582370 PPP1R12BO60237 982 aaPredicted RBP11.03□□□□□ -0.64
PDLIM1P3-201ENST00000582370 SASH1O94885 1247 aa11.03□□□□□ -0.64
PDLIM1P3-201ENST00000582370 RARSP54136 660 aaKnown RBP11.03□□□□□ -0.64
PDLIM1P3-201ENST00000582370 CAP1Q01518 475 aa11.03□□□□□ -0.64
PDLIM1P3-201ENST00000582370 C8orf58Q8NAV2 365 aa11.03□□□□□ -0.64
PDLIM1P3-201ENST00000582370 ISCA1Q9BUE6 129 aa11.03□□□□□ -0.64
PDLIM1P3-201ENST00000582370 TESPA1A2RU30 521 aaPredicted RBP11.02□□□□□ -0.65
PDLIM1P3-201ENST00000582370 IRS4O14654 1257 aaPredicted RBP11.02□□□□□ -0.65
PDLIM1P3-201ENST00000582370 DDX58O95786 925 aaKnown RBP11.02□□□□□ -0.65
PDLIM1P3-201ENST00000582370 HSP90B1P14625 803 aaKnown RBP11.02□□□□□ -0.65
PDLIM1P3-201ENST00000582370 AAMPQ13685 434 aa11.02□□□□□ -0.65
PDLIM1P3-201ENST00000582370 DACT2Q5SW24 774 aa11.02□□□□□ -0.65
PDLIM1P3-201ENST00000582370 DPF3Q92784 378 aa11.02□□□□□ -0.65
PDLIM1P3-201ENST00000582370 SMC4Q9NTJ3 1288 aa11.02□□□□□ -0.65
PDLIM1P3-201ENST00000582370 PPP2R3BQ9Y5P8 575 aa11.02□□□□□ -0.65
PDLIM1P3-201ENST00000582370 ATP2B4P23634 1241 aa11.01□□□□□ -0.65
PDLIM1P3-201ENST00000582370 STRIP1Q5VSL9 837 aa11.01□□□□□ -0.65
PDLIM1P3-201ENST00000582370 PLBD2Q8NHP8 589 aa11.01□□□□□ -0.65
PDLIM1P3-201ENST00000582370 CLMNQ96JQ2 1002 aa11.01□□□□□ -0.65
PDLIM1P3-201ENST00000582370 HTATIP2Q9BUP3 242 aa11.01□□□□□ -0.65
PDLIM1P3-201ENST00000582370 API5Q9BZZ5 524 aaKnown RBP11.01□□□□□ -0.65
PDLIM1P3-201ENST00000582370 NEFLP07196 543 aa11□□□□□ -0.65
PDLIM1P3-201ENST00000582370 PDE3AQ14432 1141 aa11□□□□□ -0.65
PDLIM1P3-201ENST00000582370 ZKSCAN2Q63HK3 967 aa11□□□□□ -0.65
PDLIM1P3-201ENST00000582370 TSPYL6Q8N831 410 aa11□□□□□ -0.65
PDLIM1P3-201ENST00000582370 ZBED3Q96IU2 234 aaPredicted RBP11□□□□□ -0.65
PDLIM1P3-201ENST00000582370 PTPN18Q99952 460 aa11□□□□□ -0.65
PDLIM1P3-201ENST00000582370 DEFB129Q9H1M3 183 aa11□□□□□ -0.65
PDLIM1P3-201ENST00000582370 SEC31BQ9NQW1 1179 aa11□□□□□ -0.65
PDLIM1P3-201ENST00000582370 FZD1Q9UP38 647 aa11□□□□□ -0.65
PDLIM1P3-201ENST00000582370 NR2E3Q9Y5X4 410 aa11□□□□□ -0.65
PDLIM1P3-201ENST00000582370 ARAP2Q8WZ64 1704 aa10.99□□□□□ -0.65
PDLIM1P3-201ENST00000582370 ELL2O00472 640 aaPredicted RBP10.99□□□□□ -0.65
PDLIM1P3-201ENST00000582370 SLC4A2P04920 1241 aa10.99□□□□□ -0.65
PDLIM1P3-201ENST00000582370 IREB2P48200 963 aaKnown RBP10.99□□□□□ -0.65
PDLIM1P3-201ENST00000582370 PRMT2P55345 433 aa10.99□□□□□ -0.65
PDLIM1P3-201ENST00000582370 TRIM28Q13263 835 aaKnown RBP10.99□□□□□ -0.65
PDLIM1P3-201ENST00000582370 CCDC152Q4G0S7 254 aa10.99□□□□□ -0.65
PDLIM1P3-201ENST00000582370 RTL5Q5HYW3 569 aaPredicted RBP10.99□□□□□ -0.65
PDLIM1P3-201ENST00000582370 ERICH6BQ5W0A0 696 aa10.99□□□□□ -0.65
PDLIM1P3-201ENST00000582370 ANKRD13DQ6ZTN6 518 aa10.99□□□□□ -0.65
PDLIM1P3-201ENST00000582370 NKX2-3Q8TAU0 364 aa10.99□□□□□ -0.65
PDLIM1P3-201ENST00000582370 SH3TC2Q8TF17 1288 aa10.99□□□□□ -0.65
PDLIM1P3-201ENST00000582370 SSH1Q8WYL5 1049 aa10.99□□□□□ -0.65
PDLIM1P3-201ENST00000582370 SHISA4Q96DD7 197 aa10.99□□□□□ -0.65
PDLIM1P3-201ENST00000582370 ZFYVE28Q9HCC9 887 aa10.99□□□□□ -0.65
PDLIM1P3-201ENST00000582370 HDAC5Q9UQL6 1122 aa10.99□□□□□ -0.65
PDLIM1P3-201ENST00000582370 ALPK3Q96L96 1907 aa10.99□□□□□ -0.65
PDLIM1P3-201ENST00000582370 MGAMO43451 1857 aa10.98□□□□□ -0.65
PDLIM1P3-201ENST00000582370 WTIPA6NIX2 430 aaPredicted RBP10.98□□□□□ -0.65
PDLIM1P3-201ENST00000582370 ATP5J2-PTCD1G3V325 749 aa10.98□□□□□ -0.65
PDLIM1P3-201ENST00000582370 MYCP01106 439 aaPredicted RBP10.98□□□□□ -0.65
PDLIM1P3-201ENST00000582370 GNRH1P01148 92 aa10.98□□□□□ -0.65
PDLIM1P3-201ENST00000582370 GJA5P36382 358 aa10.98□□□□□ -0.65
PDLIM1P3-201ENST00000582370 TAF1CQ15572 869 aaPredicted RBP10.98□□□□□ -0.65
PDLIM1P3-201ENST00000582370 SUPT20HL1Q3ZLR7 823 aa10.98□□□□□ -0.65
PDLIM1P3-201ENST00000582370 GPR153Q6NV75 609 aa10.98□□□□□ -0.65
PDLIM1P3-201ENST00000582370 ANKRD13AQ8IZ07 590 aa10.98□□□□□ -0.65
PDLIM1P3-201ENST00000582370 ZBTB38Q8NAP3 1195 aaPredicted RBP10.98□□□□□ -0.65
PDLIM1P3-201ENST00000582370 FBXW7Q969H0 707 aa10.98□□□□□ -0.65
PDLIM1P3-201ENST00000582370 MXD3Q9BW11 206 aa10.98□□□□□ -0.65
PDLIM1P3-201ENST00000582370 COA1Q9GZY4 146 aa10.98□□□□□ -0.65
PDLIM1P3-201ENST00000582370 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.98□□□□□ -0.65
PDLIM1P3-201ENST00000582370 ZNF804BA4D1E1 1349 aa10.98□□□□□ -0.65
PDLIM1P3-201ENST00000582370 VCANP13611 3396 aa10.97□□□□□ -0.65
PDLIM1P3-201ENST00000582370 SOX1O00570 391 aaPredicted RBP10.97□□□□□ -0.65
PDLIM1P3-201ENST00000582370 ZBTB7BO15156 539 aaPredicted RBP10.97□□□□□ -0.65
PDLIM1P3-201ENST00000582370 ATF7IPQ6VMQ6 1270 aa10.97□□□□□ -0.65
PDLIM1P3-201ENST00000582370 UBE2Q1Q7Z7E8 422 aa10.97□□□□□ -0.65
PDLIM1P3-201ENST00000582370 ANKRD18AQ8IVF6 992 aa10.97□□□□□ -0.65
PDLIM1P3-201ENST00000582370 MRPL50Q8N5N7 158 aaKnown RBP10.97□□□□□ -0.65
PDLIM1P3-201ENST00000582370 LRCH3Q96II8 777 aa10.97□□□□□ -0.65
PDLIM1P3-201ENST00000582370 CHPF2Q9P2E5 772 aa10.97□□□□□ -0.65
PDLIM1P3-201ENST00000582370 A0A1B0GUL6 1792 aa10.97□□□□□ -0.65
PDLIM1P3-201ENST00000582370 WDHD1O75717 1129 aaPredicted RBP10.96□□□□□ -0.65
PDLIM1P3-201ENST00000582370 GJA8P48165 433 aa10.96□□□□□ -0.65
PDLIM1P3-201ENST00000582370 RRP1P56182 461 aaKnown RBP10.96□□□□□ -0.65
PDLIM1P3-201ENST00000582370 FLIIQ13045 1269 aa10.96□□□□□ -0.65
PDLIM1P3-201ENST00000582370 KIF22Q14807 665 aa10.96□□□□□ -0.65
PDLIM1P3-201ENST00000582370 KIAA0825Q8IV33 1275 aa10.96□□□□□ -0.65
PDLIM1P3-201ENST00000582370 FTSJ3Q8IY81 847 aaKnown RBP10.96□□□□□ -0.65
PDLIM1P3-201ENST00000582370 MTMR14Q8NCE2 650 aa10.96□□□□□ -0.65
PDLIM1P3-201ENST00000582370 OPTNQ96CV9 577 aa10.96□□□□□ -0.65
PDLIM1P3-201ENST00000582370 MYO1BO43795 1136 aa10.95□□□□□ -0.66
PDLIM1P3-201ENST00000582370 PDE8AO60658 829 aa10.95□□□□□ -0.66
PDLIM1P3-201ENST00000582370 CCT4P50991 539 aaKnown RBP10.95□□□□□ -0.66
PDLIM1P3-201ENST00000582370 LACTBP83111 547 aaPredicted RBP10.95□□□□□ -0.66
PDLIM1P3-201ENST00000582370 NEXNQ0ZGT2 675 aa10.95□□□□□ -0.66
PDLIM1P3-201ENST00000582370 FKBP5Q13451 457 aaPredicted RBP10.95□□□□□ -0.66
PDLIM1P3-201ENST00000582370 DLGAP5Q15398 846 aa10.95□□□□□ -0.66
PDLIM1P3-201ENST00000582370 KRT24Q2M2I5 525 aa10.95□□□□□ -0.66
PDLIM1P3-201ENST00000582370 TTLL5Q6EMB2 1281 aa10.95□□□□□ -0.66
PDLIM1P3-201ENST00000582370 KSR2Q6VAB6 950 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms