RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 A0A1W2PPC1 479 aa17.96■□□□□ 0.47
CSNK1D-219ENST00000581660 GTF2IP78347 998 aa17.96■□□□□ 0.47
CSNK1D-219ENST00000581660 NBPF12Q5TAG4 269 aaPredicted RBP17.96■□□□□ 0.47
CSNK1D-219ENST00000581660 UBE2Q1Q7Z7E8 422 aa17.96■□□□□ 0.47
CSNK1D-219ENST00000581660 SH3TC2Q8TF17 1288 aa17.96■□□□□ 0.47
CSNK1D-219ENST00000581660 OPTNQ96CV9 577 aa17.96■□□□□ 0.47
CSNK1D-219ENST00000581660 GNRH1P01148 92 aa17.95■□□□□ 0.46
CSNK1D-219ENST00000581660 TAF1CQ15572 869 aaPredicted RBP17.95■□□□□ 0.46
CSNK1D-219ENST00000581660 TTLL11Q8NHH1 800 aa17.95■□□□□ 0.46
CSNK1D-219ENST00000581660 DPF3Q92784 378 aa17.95■□□□□ 0.46
CSNK1D-219ENST00000581660 MYH3P11055 1940 aa17.94■□□□□ 0.46
CSNK1D-219ENST00000581660 SPDYE2BA6NHP3 402 aa17.94■□□□□ 0.46
CSNK1D-219ENST00000581660 MYCP01106 439 aaPredicted RBP17.94■□□□□ 0.46
CSNK1D-219ENST00000581660 SPDYE6P0CI01 402 aa17.94■□□□□ 0.46
CSNK1D-219ENST00000581660 KLRK1P26718 216 aa17.94■□□□□ 0.46
CSNK1D-219ENST00000581660 PRMT2P55345 433 aa17.94■□□□□ 0.46
CSNK1D-219ENST00000581660 CERS5Q8N5B7 392 aa17.94■□□□□ 0.46
CSNK1D-219ENST00000581660 JARID2Q92833 1246 aaPredicted RBP17.94■□□□□ 0.46
CSNK1D-219ENST00000581660 GREM2Q9H772 168 aa17.94■□□□□ 0.46
CSNK1D-219ENST00000581660 MYO1BO43795 1136 aa17.93■□□□□ 0.46
CSNK1D-219ENST00000581660 DUSP27Q5VZP5 1158 aa17.93■□□□□ 0.46
CSNK1D-219ENST00000581660 ELP3Q9H9T3 547 aa17.93■□□□□ 0.46
CSNK1D-219ENST00000581660 PCDHAC2Q9Y5I4 1007 aa17.93■□□□□ 0.46
CSNK1D-219ENST00000581660 CCL15-CCL14A0A0B4J2E2 113 aa17.92■□□□□ 0.46
CSNK1D-219ENST00000581660 CLRN2A0PK11 232 aa17.92■□□□□ 0.46
CSNK1D-219ENST00000581660 GTF2A2P52657 109 aa17.92■□□□□ 0.46
CSNK1D-219ENST00000581660 LACTBP83111 547 aaPredicted RBP17.92■□□□□ 0.46
CSNK1D-219ENST00000581660 CCL15Q16663 113 aa17.92■□□□□ 0.46
CSNK1D-219ENST00000581660 CFAP100Q494V2 611 aa17.92■□□□□ 0.46
CSNK1D-219ENST00000581660 FAM43AQ8N2R8 423 aa17.92■□□□□ 0.46
CSNK1D-219ENST00000581660 NKX2-3Q8TAU0 364 aa17.92■□□□□ 0.46
CSNK1D-219ENST00000581660 HTATIP2Q9BUP3 242 aa17.92■□□□□ 0.46
CSNK1D-219ENST00000581660 METTL22Q9BUU2 404 aaPredicted RBP17.92■□□□□ 0.46
CSNK1D-219ENST00000581660 ARHGAP39Q9C0H5 1083 aa17.92■□□□□ 0.46
CSNK1D-219ENST00000581660 ANKRD2Q9GZV1 360 aa17.92■□□□□ 0.46
CSNK1D-219ENST00000581660 PHAXQ9H814 394 aaKnown RBP17.92■□□□□ 0.46
CSNK1D-219ENST00000581660 ZSWIM8A7E2V4 1837 aa17.92■□□□□ 0.46
CSNK1D-219ENST00000581660 TLR2O60603 784 aa17.91■□□□□ 0.46
CSNK1D-219ENST00000581660 RASA3Q14644 834 aa17.91■□□□□ 0.46
CSNK1D-219ENST00000581660 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.91■□□□□ 0.46
CSNK1D-219ENST00000581660 PRMT6Q96LA8 375 aaPredicted RBP17.91■□□□□ 0.46
CSNK1D-219ENST00000581660 CD209Q9NNX6 404 aa17.91■□□□□ 0.46
CSNK1D-219ENST00000581660 ZCCHC17Q9NP64 241 aaKnown RBP17.91■□□□□ 0.46
CSNK1D-219ENST00000581660 TRIM35Q9UPQ4 493 aa17.91■□□□□ 0.46
CSNK1D-219ENST00000581660 LAS1LQ9Y4W2 734 aaKnown RBP17.91■□□□□ 0.46
CSNK1D-219ENST00000581660 NR2E3Q9Y5X4 410 aa17.91■□□□□ 0.46
CSNK1D-219ENST00000581660 AOX1Q06278 1338 aa17.91■□□□□ 0.46
CSNK1D-219ENST00000581660 IRS2Q9Y4H2 1338 aa17.91■□□□□ 0.46
CSNK1D-219ENST00000581660 ZBTB7BO15156 539 aaPredicted RBP17.9■□□□□ 0.46
CSNK1D-219ENST00000581660 GJA8P48165 433 aa17.9■□□□□ 0.46
CSNK1D-219ENST00000581660 FKBP1AP62942 108 aaKnown RBP17.9■□□□□ 0.46
CSNK1D-219ENST00000581660 KIF22Q14807 665 aa17.9■□□□□ 0.46
CSNK1D-219ENST00000581660 MTFR1Q15390 333 aa17.9■□□□□ 0.46
CSNK1D-219ENST00000581660 VEZTQ9HBM0 779 aa17.9■□□□□ 0.46
CSNK1D-219ENST00000581660 SOX1O00570 391 aaPredicted RBP17.89■□□□□ 0.45
CSNK1D-219ENST00000581660 WDHD1O75717 1129 aaPredicted RBP17.89■□□□□ 0.45
CSNK1D-219ENST00000581660 CNKSR2Q8WXI2 1034 aa17.89■□□□□ 0.45
CSNK1D-219ENST00000581660 GJB1P08034 283 aa17.88■□□□□ 0.45
CSNK1D-219ENST00000581660 IGHMBP2P38935 993 aaKnown RBP17.88■□□□□ 0.45
CSNK1D-219ENST00000581660 TNFAIP1Q13829 316 aa17.88■□□□□ 0.45
CSNK1D-219ENST00000581660 VGLL4Q14135 290 aa17.88■□□□□ 0.45
CSNK1D-219ENST00000581660 C15orf52Q6ZUT6 534 aaKnown RBP17.88■□□□□ 0.45
CSNK1D-219ENST00000581660 TEPSINQ96N21 525 aa17.88■□□□□ 0.45
CSNK1D-219ENST00000581660 UNC80Q8N2C7 3258 aa17.87■□□□□ 0.45
CSNK1D-219ENST00000581660 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.87■□□□□ 0.45
CSNK1D-219ENST00000581660 DDX58O95786 925 aaKnown RBP17.86■□□□□ 0.45
CSNK1D-219ENST00000581660 IGKV5-2P06315 115 aa17.86■□□□□ 0.45
CSNK1D-219ENST00000581660 IL1R1P14778 569 aa17.86■□□□□ 0.45
CSNK1D-219ENST00000581660 MAP3K9P80192 1104 aa17.86■□□□□ 0.45
CSNK1D-219ENST00000581660 NEUROD2Q15784 382 aa17.86■□□□□ 0.45
CSNK1D-219ENST00000581660 SPDYE2Q495Y8 402 aa17.86■□□□□ 0.45
CSNK1D-219ENST00000581660 GPR153Q6NV75 609 aa17.86■□□□□ 0.45
CSNK1D-219ENST00000581660 LRCH3Q96II8 777 aa17.86■□□□□ 0.45
CSNK1D-219ENST00000581660 MBIPQ9NS73 344 aa17.86■□□□□ 0.45
CSNK1D-219ENST00000581660 SRRDQ9UH36 339 aa17.86■□□□□ 0.45
CSNK1D-219ENST00000581660 SPDYE5A6NIY4 337 aa17.85■□□□□ 0.45
CSNK1D-219ENST00000581660 F8W031 263 aaPredicted RBP17.85■□□□□ 0.45
CSNK1D-219ENST00000581660 CETPP11597 493 aa17.85■□□□□ 0.45
CSNK1D-219ENST00000581660 ARAP2Q8WZ64 1704 aa17.85■□□□□ 0.45
CSNK1D-219ENST00000581660 CSADQ9Y600 493 aa17.85■□□□□ 0.45
CSNK1D-219ENST00000581660 BTBD19C9JJ37 291 aa17.84■□□□□ 0.45
CSNK1D-219ENST00000581660 CCL5P13501 91 aa17.84■□□□□ 0.45
CSNK1D-219ENST00000581660 GRK4P32298 578 aa17.84■□□□□ 0.45
CSNK1D-219ENST00000581660 KCNJ4P48050 445 aa17.84■□□□□ 0.45
CSNK1D-219ENST00000581660 CDAN1Q8IWY9 1227 aa17.84■□□□□ 0.45
CSNK1D-219ENST00000581660 HELBQ8NG08 1087 aaPredicted RBP17.84■□□□□ 0.45
CSNK1D-219ENST00000581660 PLA2G12BQ9BX93 195 aa17.84■□□□□ 0.45
CSNK1D-219ENST00000581660 FARP2O94887 1054 aaPredicted RBP17.83■□□□□ 0.44
CSNK1D-219ENST00000581660 ZNF853P0CG23 659 aa17.83■□□□□ 0.44
CSNK1D-219ENST00000581660 ITGA6P23229 1130 aa17.83■□□□□ 0.44
CSNK1D-219ENST00000581660 CTGFP29279 349 aa17.83■□□□□ 0.44
CSNK1D-219ENST00000581660 CHRNDQ07001 517 aa17.83■□□□□ 0.44
CSNK1D-219ENST00000581660 C17orf99Q6UX52 265 aa17.83■□□□□ 0.44
CSNK1D-219ENST00000581660 TRIM47Q96LD4 638 aa17.83■□□□□ 0.44
CSNK1D-219ENST00000581660 MPHOSPH8Q99549 860 aa17.83■□□□□ 0.44
CSNK1D-219ENST00000581660 ZNF70Q9UC06 446 aaPredicted RBP17.83■□□□□ 0.44
CSNK1D-219ENST00000581660 MAP3K2Q9Y2U5 619 aa17.83■□□□□ 0.44
CSNK1D-219ENST00000581660 RIPOR2Q9Y4F9 1068 aa17.83■□□□□ 0.44
CSNK1D-219ENST00000581660 KSR2Q6VAB6 950 aa17.82■□□□□ 0.44
CSNK1D-219ENST00000581660 SNCAIPQ9Y6H5 919 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms