RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 USP2O75604 605 aaPredicted RBP16.27■□□□□ 0.2
CSNK1D-218ENST00000581655 ANKRD13AQ8IZ07 590 aa16.27■□□□□ 0.2
CSNK1D-218ENST00000581655 TTLL11Q8NHH1 800 aa16.27■□□□□ 0.2
CSNK1D-218ENST00000581655 GREM2Q9H772 168 aa16.27■□□□□ 0.2
CSNK1D-218ENST00000581655 TRIM35Q9UPQ4 493 aa16.27■□□□□ 0.2
CSNK1D-218ENST00000581655 LEMD3Q9Y2U8 911 aa16.27■□□□□ 0.2
CSNK1D-218ENST00000581655 OTOFQ9HC10 1997 aa16.26■□□□□ 0.19
CSNK1D-218ENST00000581655 TAF1CQ15572 869 aaPredicted RBP16.26■□□□□ 0.19
CSNK1D-218ENST00000581655 CCDC146Q8IYE0 955 aa16.26■□□□□ 0.19
CSNK1D-218ENST00000581655 SH3TC2Q8TF17 1288 aa16.26■□□□□ 0.19
CSNK1D-218ENST00000581655 VEZTQ9HBM0 779 aa16.26■□□□□ 0.19
CSNK1D-218ENST00000581655 CERS5Q8N5B7 392 aa16.25■□□□□ 0.19
CSNK1D-218ENST00000581655 MTMR14Q8NCE2 650 aa16.25■□□□□ 0.19
CSNK1D-218ENST00000581655 OPTNQ96CV9 577 aa16.25■□□□□ 0.19
CSNK1D-218ENST00000581655 MS4A4AQ96JQ5 239 aa16.25■□□□□ 0.19
CSNK1D-218ENST00000581655 METTL22Q9BUU2 404 aaPredicted RBP16.25■□□□□ 0.19
CSNK1D-218ENST00000581655 ELP3Q9H9T3 547 aa16.25■□□□□ 0.19
CSNK1D-218ENST00000581655 ZFYVE28Q9HCC9 887 aa16.25■□□□□ 0.19
CSNK1D-218ENST00000581655 ZSWIM8A7E2V4 1837 aa16.24■□□□□ 0.19
CSNK1D-218ENST00000581655 MYO1BO43795 1136 aa16.24■□□□□ 0.19
CSNK1D-218ENST00000581655 CFAP100Q494V2 611 aa16.24■□□□□ 0.19
CSNK1D-218ENST00000581655 BRI3BPQ8WY22 251 aa16.24■□□□□ 0.19
CSNK1D-218ENST00000581655 DPF3Q92784 378 aa16.24■□□□□ 0.19
CSNK1D-218ENST00000581655 AOX1Q06278 1338 aa16.23■□□□□ 0.19
CSNK1D-218ENST00000581655 SPDYE2BA6NHP3 402 aa16.23■□□□□ 0.19
CSNK1D-218ENST00000581655 F8W031 263 aaPredicted RBP16.23■□□□□ 0.19
CSNK1D-218ENST00000581655 SPDYE6P0CI01 402 aa16.23■□□□□ 0.19
CSNK1D-218ENST00000581655 IGHMBP2P38935 993 aaKnown RBP16.23■□□□□ 0.19
CSNK1D-218ENST00000581655 RASA3Q14644 834 aa16.23■□□□□ 0.19
CSNK1D-218ENST00000581655 CNKSR2Q8WXI2 1034 aa16.23■□□□□ 0.19
CSNK1D-218ENST00000581655 PRMT6Q96LA8 375 aaPredicted RBP16.23■□□□□ 0.19
CSNK1D-218ENST00000581655 CD209Q9NNX6 404 aa16.23■□□□□ 0.19
CSNK1D-218ENST00000581655 CCL15-CCL14A0A0B4J2E2 113 aa16.22■□□□□ 0.19
CSNK1D-218ENST00000581655 CCL15Q16663 113 aa16.22■□□□□ 0.19
CSNK1D-218ENST00000581655 FAM43AQ8N2R8 423 aa16.22■□□□□ 0.19
CSNK1D-218ENST00000581655 SHISA4Q96DD7 197 aa16.22■□□□□ 0.19
CSNK1D-218ENST00000581655 ARHGAP39Q9C0H5 1083 aa16.22■□□□□ 0.19
CSNK1D-218ENST00000581655 ANKRD2Q9GZV1 360 aa16.22■□□□□ 0.19
CSNK1D-218ENST00000581655 MBIPQ9NS73 344 aa16.22■□□□□ 0.19
CSNK1D-218ENST00000581655 ELL2O00472 640 aaPredicted RBP16.21■□□□□ 0.19
CSNK1D-218ENST00000581655 DDX58O95786 925 aaKnown RBP16.21■□□□□ 0.19
CSNK1D-218ENST00000581655 IGKV5-2P06315 115 aa16.21■□□□□ 0.19
CSNK1D-218ENST00000581655 KCNJ4P48050 445 aa16.21■□□□□ 0.19
CSNK1D-218ENST00000581655 MAP3K2Q9Y2U5 619 aa16.21■□□□□ 0.19
CSNK1D-218ENST00000581655 GTF2A2P52657 109 aa16.2■□□□□ 0.18
CSNK1D-218ENST00000581655 MTFR1Q15390 333 aa16.2■□□□□ 0.18
CSNK1D-218ENST00000581655 PRO3102Q9H379 93 aa16.2■□□□□ 0.18
CSNK1D-218ENST00000581655 SNAP23O00161 211 aa16.19■□□□□ 0.18
CSNK1D-218ENST00000581655 RBM5P52756 815 aaKnown RBP eCLIP16.19■□□□□ 0.18
CSNK1D-218ENST00000581655 KIF22Q14807 665 aa16.19■□□□□ 0.18
CSNK1D-218ENST00000581655 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.19■□□□□ 0.18
CSNK1D-218ENST00000581655 MPHOSPH8Q99549 860 aa16.19■□□□□ 0.18
CSNK1D-218ENST00000581655 LAMA3Q16787 3333 aa16.18■□□□□ 0.18
CSNK1D-218ENST00000581655 ECM2O94769 699 aaPredicted RBP16.18■□□□□ 0.18
CSNK1D-218ENST00000581655 ITGA6P23229 1130 aa16.18■□□□□ 0.18
CSNK1D-218ENST00000581655 LACTBP83111 547 aaPredicted RBP16.18■□□□□ 0.18
CSNK1D-218ENST00000581655 CHRNDQ07001 517 aa16.18■□□□□ 0.18
CSNK1D-218ENST00000581655 RUNDC1Q96C34 613 aa16.18■□□□□ 0.18
CSNK1D-218ENST00000581655 JAG2Q9Y219 1238 aa16.18■□□□□ 0.18
CSNK1D-218ENST00000581655 TLR2O60603 784 aa16.17■□□□□ 0.18
CSNK1D-218ENST00000581655 WDHD1O75717 1129 aaPredicted RBP16.17■□□□□ 0.18
CSNK1D-218ENST00000581655 TNFAIP1Q13829 316 aa16.17■□□□□ 0.18
CSNK1D-218ENST00000581655 VGLL4Q14135 290 aa16.17■□□□□ 0.18
CSNK1D-218ENST00000581655 CWF19L2Q2TBE0 894 aaKnown RBP16.17■□□□□ 0.18
CSNK1D-218ENST00000581655 UBE3BQ7Z3V4 1068 aa16.17■□□□□ 0.18
CSNK1D-218ENST00000581655 CDAN1Q8IWY9 1227 aa16.17■□□□□ 0.18
CSNK1D-218ENST00000581655 HTATIP2Q9BUP3 242 aa16.17■□□□□ 0.18
CSNK1D-218ENST00000581655 IRS2Q9Y4H2 1338 aa16.17■□□□□ 0.18
CSNK1D-218ENST00000581655 PI4KAP2A4QPH2 592 aa16.16■□□□□ 0.18
CSNK1D-218ENST00000581655 PRMT2P55345 433 aa16.16■□□□□ 0.18
CSNK1D-218ENST00000581655 FKBP1AP62942 108 aaKnown RBP16.16■□□□□ 0.18
CSNK1D-218ENST00000581655 KSR2Q6VAB6 950 aa16.16■□□□□ 0.18
CSNK1D-218ENST00000581655 PI4KAP1Q8N8J0 262 aa16.16■□□□□ 0.18
CSNK1D-218ENST00000581655 ZNF70Q9UC06 446 aaPredicted RBP16.16■□□□□ 0.18
CSNK1D-218ENST00000581655 NEURL1BA8MQ27 555 aa16.15■□□□□ 0.18
CSNK1D-218ENST00000581655 TAF5LO75529 589 aa16.15■□□□□ 0.18
CSNK1D-218ENST00000581655 GNRH1P01148 92 aa16.15■□□□□ 0.18
CSNK1D-218ENST00000581655 ZNF853P0CG23 659 aa16.15■□□□□ 0.18
CSNK1D-218ENST00000581655 IL1R1P14778 569 aa16.15■□□□□ 0.18
CSNK1D-218ENST00000581655 MAP3K9P80192 1104 aa16.15■□□□□ 0.18
CSNK1D-218ENST00000581655 NEXNQ0ZGT2 675 aa16.15■□□□□ 0.18
CSNK1D-218ENST00000581655 SPDYE2Q495Y8 402 aa16.15■□□□□ 0.18
CSNK1D-218ENST00000581655 C15orf52Q6ZUT6 534 aaKnown RBP16.15■□□□□ 0.18
CSNK1D-218ENST00000581655 ZNF804AQ7Z570 1209 aa16.15■□□□□ 0.18
CSNK1D-218ENST00000581655 UBE2Q1Q7Z7E8 422 aa16.15■□□□□ 0.18
CSNK1D-218ENST00000581655 HELBQ8NG08 1087 aaPredicted RBP16.15■□□□□ 0.18
CSNK1D-218ENST00000581655 NKX2-3Q8TAU0 364 aa16.15■□□□□ 0.18
CSNK1D-218ENST00000581655 TEPSINQ96N21 525 aa16.15■□□□□ 0.18
CSNK1D-218ENST00000581655 TDRD3Q9H7E2 651 aaKnown RBP16.15■□□□□ 0.18
CSNK1D-218ENST00000581655 NR2E3Q9Y5X4 410 aa16.15■□□□□ 0.18
CSNK1D-218ENST00000581655 CSADQ9Y600 493 aa16.15■□□□□ 0.18
CSNK1D-218ENST00000581655 BTBD19C9JJ37 291 aa16.14■□□□□ 0.17
CSNK1D-218ENST00000581655 H7C1W4 665 aa16.14■□□□□ 0.17
CSNK1D-218ENST00000581655 SOX1O00570 391 aaPredicted RBP16.14■□□□□ 0.17
CSNK1D-218ENST00000581655 GJA8P48165 433 aa16.14■□□□□ 0.17
CSNK1D-218ENST00000581655 CCDC30Q5VVM6 783 aa16.14■□□□□ 0.17
CSNK1D-218ENST00000581655 C8orf58Q8NAV2 365 aa16.14■□□□□ 0.17
CSNK1D-218ENST00000581655 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.14■□□□□ 0.17
CSNK1D-218ENST00000581655 LRCH3Q96II8 777 aa16.14■□□□□ 0.17
CSNK1D-218ENST00000581655 A0A1B0GUL6 1792 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms