RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 A0A1B0GUL6 1792 aa12.28□□□□□ -0.44
TOP3A-211ENST00000581536 PSME4Q14997 1843 aa12.27□□□□□ -0.44
TOP3A-211ENST00000581536 TRPM7Q96QT4 1865 aa12.27□□□□□ -0.44
TOP3A-211ENST00000581536 EGFRP00533 1210 aa12.27□□□□□ -0.45
TOP3A-211ENST00000581536 VIL1P09327 827 aaKnown RBP12.27□□□□□ -0.45
TOP3A-211ENST00000581536 KLRK1P26718 216 aa12.27□□□□□ -0.45
TOP3A-211ENST00000581536 CHRNDQ07001 517 aa12.27□□□□□ -0.45
TOP3A-211ENST00000581536 RBM26Q5T8P6 1007 aaKnown RBP12.27□□□□□ -0.45
TOP3A-211ENST00000581536 DLK2Q6UY11 383 aa12.27□□□□□ -0.45
TOP3A-211ENST00000581536 SAMD7Q7Z3H4 446 aa12.27□□□□□ -0.45
TOP3A-211ENST00000581536 TRPM4Q8TD43 1214 aa12.27□□□□□ -0.45
TOP3A-211ENST00000581536 KLRG1Q96E93 195 aa12.27□□□□□ -0.45
TOP3A-211ENST00000581536 USP44Q9H0E7 712 aa12.27□□□□□ -0.45
TOP3A-211ENST00000581536 SMC4Q9NTJ3 1288 aa12.27□□□□□ -0.45
TOP3A-211ENST00000581536 TRAF5O00463 557 aa12.26□□□□□ -0.45
TOP3A-211ENST00000581536 PLIN1O60240 522 aa12.26□□□□□ -0.45
TOP3A-211ENST00000581536 IFIT5Q13325 482 aaKnown RBP12.26□□□□□ -0.45
TOP3A-211ENST00000581536 PPP1R15BQ5SWA1 713 aa12.26□□□□□ -0.45
TOP3A-211ENST00000581536 PLPP6Q8IY26 295 aa12.26□□□□□ -0.45
TOP3A-211ENST00000581536 MXD3Q9BW11 206 aa12.26□□□□□ -0.45
TOP3A-211ENST00000581536 PUS3Q9BZE2 481 aaKnown RBP12.26□□□□□ -0.45
TOP3A-211ENST00000581536 PTPRCP08575 1304 aa12.26□□□□□ -0.45
TOP3A-211ENST00000581536 ZNF646O15015 1829 aaPredicted RBP12.25□□□□□ -0.45
TOP3A-211ENST00000581536 H7C1D1 291 aa12.25□□□□□ -0.45
TOP3A-211ENST00000581536 RARSP54136 660 aaKnown RBP12.25□□□□□ -0.45
TOP3A-211ENST00000581536 HNRNPUQ00839 825 aaKnown RBP eCLIP12.25□□□□□ -0.45
TOP3A-211ENST00000581536 CCDC57Q2TAC2 916 aa12.25□□□□□ -0.45
TOP3A-211ENST00000581536 TBC1D10BQ4KMP7 808 aaPredicted RBP12.25□□□□□ -0.45
TOP3A-211ENST00000581536 BICC1Q9H694 974 aaKnown RBP12.25□□□□□ -0.45
TOP3A-211ENST00000581536 MKRN1Q9UHC7 482 aaKnown RBP12.25□□□□□ -0.45
TOP3A-211ENST00000581536 LEMD3Q9Y2U8 911 aa12.25□□□□□ -0.45
TOP3A-211ENST00000581536 ZNF804BA4D1E1 1349 aa12.25□□□□□ -0.45
TOP3A-211ENST00000581536 UTYO14607 1347 aa12.25□□□□□ -0.45
TOP3A-211ENST00000581536 BCAR3O75815 825 aa12.24□□□□□ -0.45
TOP3A-211ENST00000581536 CST9Q5W186 159 aa12.24□□□□□ -0.45
TOP3A-211ENST00000581536 LDHAL6AQ6ZMR3 332 aa12.24□□□□□ -0.45
TOP3A-211ENST00000581536 ANKRD44Q8N8A2 993 aa12.24□□□□□ -0.45
TOP3A-211ENST00000581536 DPF2Q92785 391 aa12.24□□□□□ -0.45
TOP3A-211ENST00000581536 GLIS2Q9BZE0 524 aaPredicted RBP12.24□□□□□ -0.45
TOP3A-211ENST00000581536 ANKRD2Q9GZV1 360 aa12.24□□□□□ -0.45
TOP3A-211ENST00000581536 WDR70Q9NW82 654 aa12.24□□□□□ -0.45
TOP3A-211ENST00000581536 PGAP2Q9UHJ9 254 aa12.24□□□□□ -0.45
TOP3A-211ENST00000581536 TNNQ9UQP3 1299 aa12.24□□□□□ -0.45
TOP3A-211ENST00000581536 TMEM88BA6NKF7 163 aa12.23□□□□□ -0.45
TOP3A-211ENST00000581536 TAF7LQ5H9L4 462 aa12.23□□□□□ -0.45
TOP3A-211ENST00000581536 PODNQ7Z5L7 613 aa12.23□□□□□ -0.45
TOP3A-211ENST00000581536 KLHDC4Q8TBB5 520 aa12.23□□□□□ -0.45
TOP3A-211ENST00000581536 GMLQ99445 158 aa12.23□□□□□ -0.45
TOP3A-211ENST00000581536 MED23Q9ULK4 1368 aa12.22□□□□□ -0.45
TOP3A-211ENST00000581536 ASTN2O75129 1339 aaPredicted RBP12.22□□□□□ -0.45
TOP3A-211ENST00000581536 IRS2Q9Y4H2 1338 aa12.22□□□□□ -0.45
TOP3A-211ENST00000581536 USP17L3A6NCW0 530 aa12.22□□□□□ -0.45
TOP3A-211ENST00000581536 USP17L4A6NCW7 530 aa12.22□□□□□ -0.45
TOP3A-211ENST00000581536 CT47B1P0C2W7 299 aaPredicted RBP12.22□□□□□ -0.45
TOP3A-211ENST00000581536 LRRC24Q50LG9 513 aa12.22□□□□□ -0.45
TOP3A-211ENST00000581536 RSBN1LQ6PCB5 846 aaPredicted RBP12.22□□□□□ -0.45
TOP3A-211ENST00000581536 USP17L1Q7RTZ2 530 aa12.22□□□□□ -0.45
TOP3A-211ENST00000581536 USP48Q86UV5 1035 aa12.22□□□□□ -0.45
TOP3A-211ENST00000581536 JMYQ8N9B5 988 aa12.22□□□□□ -0.45
TOP3A-211ENST00000581536 FBXW7Q969H0 707 aa12.22□□□□□ -0.45
TOP3A-211ENST00000581536 CNNM1Q9NRU3 951 aa12.22□□□□□ -0.45
TOP3A-211ENST00000581536 SLC34A2O95436 690 aa12.21□□□□□ -0.45
TOP3A-211ENST00000581536 HOXB3P14651 431 aaPredicted RBP12.21□□□□□ -0.45
TOP3A-211ENST00000581536 RPS12P25398 132 aaKnown RBP12.21□□□□□ -0.45
TOP3A-211ENST00000581536 KCNJ4P48050 445 aa12.21□□□□□ -0.45
TOP3A-211ENST00000581536 BRPF1P55201 1214 aaPredicted RBP12.21□□□□□ -0.45
TOP3A-211ENST00000581536 RABL6Q3YEC7 729 aaPredicted RBP12.21□□□□□ -0.45
TOP3A-211ENST00000581536 DACT2Q5SW24 774 aa12.21□□□□□ -0.45
TOP3A-211ENST00000581536 COA1Q9GZY4 146 aa12.21□□□□□ -0.45
TOP3A-211ENST00000581536 CD209Q9NNX6 404 aa12.21□□□□□ -0.45
TOP3A-211ENST00000581536 SCAF8Q9UPN6 1271 aaKnown RBP12.21□□□□□ -0.45
TOP3A-211ENST00000581536 RIPOR2Q9Y4F9 1068 aa12.21□□□□□ -0.45
TOP3A-211ENST00000581536 VEGFBP49765 207 aa12.2□□□□□ -0.46
TOP3A-211ENST00000581536 GTF2IP78347 998 aa12.2□□□□□ -0.46
TOP3A-211ENST00000581536 TTLL5Q6EMB2 1281 aa12.2□□□□□ -0.46
TOP3A-211ENST00000581536 AGBL3Q8NEM8 1001 aa12.2□□□□□ -0.46
TOP3A-211ENST00000581536 USP17L8P0C7I0 530 aa12.19□□□□□ -0.46
TOP3A-211ENST00000581536 ZNF280AP59817 542 aaPredicted RBP12.19□□□□□ -0.46
TOP3A-211ENST00000581536 SCARF1Q14162 830 aa12.19□□□□□ -0.46
TOP3A-211ENST00000581536 DEFB115Q30KQ5 88 aa12.19□□□□□ -0.46
TOP3A-211ENST00000581536 CDC37L1Q7L3B6 337 aa12.19□□□□□ -0.46
TOP3A-211ENST00000581536 ZC3H15Q8WU90 426 aaKnown RBP12.19□□□□□ -0.46
TOP3A-211ENST00000581536 FRAT1Q92837 279 aaPredicted RBP12.19□□□□□ -0.46
TOP3A-211ENST00000581536 JAG2Q9Y219 1238 aa12.19□□□□□ -0.46
TOP3A-211ENST00000581536 CELF2O95319 508 aaKnown RBP12.18□□□□□ -0.46
TOP3A-211ENST00000581536 RFX5P48382 616 aaPredicted RBP12.18□□□□□ -0.46
TOP3A-211ENST00000581536 KIF4BQ2VIQ3 1234 aa12.18□□□□□ -0.46
TOP3A-211ENST00000581536 STRIP1Q5VSL9 837 aa12.18□□□□□ -0.46
TOP3A-211ENST00000581536 C15orf52Q6ZUT6 534 aaKnown RBP12.18□□□□□ -0.46
TOP3A-211ENST00000581536 API5Q9BZZ5 524 aaKnown RBP12.18□□□□□ -0.46
TOP3A-211ENST00000581536 ZNF408Q9H9D4 720 aa12.18□□□□□ -0.46
TOP3A-211ENST00000581536 ZSWIM6Q9HCJ5 1215 aa12.18□□□□□ -0.46
TOP3A-211ENST00000581536 MYOZ2Q9NPC6 264 aa12.18□□□□□ -0.46
TOP3A-211ENST00000581536 ABT1Q9ULW3 272 aaKnown RBP12.18□□□□□ -0.46
TOP3A-211ENST00000581536 CNTNAP1P78357 1384 aa12.18□□□□□ -0.46
TOP3A-211ENST00000581536 ADM5C9JUS6 153 aa12.17□□□□□ -0.46
TOP3A-211ENST00000581536 GYG1P46976 350 aa12.17□□□□□ -0.46
TOP3A-211ENST00000581536 NBPF9Q3BBW0 867 aa12.17□□□□□ -0.46
TOP3A-211ENST00000581536 ZNF710Q8N1W2 664 aa12.17□□□□□ -0.46
TOP3A-211ENST00000581536 CERS5Q8N5B7 392 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms