RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 SLC7A3Q8WY07 619 aa7.62□□□□□ -1.19
NF1-220ENST00000581113 FAM161BQ96MY7 647 aa7.62□□□□□ -1.19
NF1-220ENST00000581113 CARD10Q9BWT7 1032 aa7.62□□□□□ -1.19
NF1-220ENST00000581113 DEAF1O75398 565 aaPredicted RBP7.62□□□□□ -1.19
NF1-220ENST00000581113 SPATA31C1P0DKV0 1188 aa7.62□□□□□ -1.19
NF1-220ENST00000581113 PSMD2Q13200 908 aa7.62□□□□□ -1.19
NF1-220ENST00000581113 SETDB1Q15047 1291 aa7.62□□□□□ -1.19
NF1-220ENST00000581113 RGS22Q8NE09 1264 aa7.62□□□□□ -1.19
NF1-220ENST00000581113 FRMD6Q96NE9 622 aa7.62□□□□□ -1.19
NF1-220ENST00000581113 C12orf49Q9H741 205 aa7.62□□□□□ -1.19
NF1-220ENST00000581113 GIPC1O14908 333 aa7.61□□□□□ -1.19
NF1-220ENST00000581113 FSCN2O14926 492 aa7.61□□□□□ -1.19
NF1-220ENST00000581113 ITPKAP23677 461 aa7.61□□□□□ -1.19
NF1-220ENST00000581113 GRIK4Q16099 956 aa7.61□□□□□ -1.19
NF1-220ENST00000581113 FOXD4L4Q8WXT5 416 aaPredicted RBP7.61□□□□□ -1.19
NF1-220ENST00000581113 SRCIN1Q9C0H9 1055 aa7.61□□□□□ -1.19
NF1-220ENST00000581113 CLEC4MQ9H2X3 399 aaPredicted RBP7.61□□□□□ -1.19
NF1-220ENST00000581113 ZNF576Q9H609 170 aa7.61□□□□□ -1.19
NF1-220ENST00000581113 AKAP2Q9Y2D5 859 aa7.61□□□□□ -1.19
NF1-220ENST00000581113 ELNP15502 786 aa7.6□□□□□ -1.19
NF1-220ENST00000581113 EIF4BP23588 611 aaKnown RBP7.6□□□□□ -1.19
NF1-220ENST00000581113 GSTT1P30711 240 aa7.6□□□□□ -1.19
NF1-220ENST00000581113 PIP4K2BP78356 416 aa7.6□□□□□ -1.19
NF1-220ENST00000581113 PCDH1Q08174 1060 aa7.6□□□□□ -1.19
NF1-220ENST00000581113 FBXO11Q86XK2 927 aa7.6□□□□□ -1.19
NF1-220ENST00000581113 MAP4K3Q8IVH8 894 aa7.6□□□□□ -1.19
NF1-220ENST00000581113 SRA1Q9HD15 236 aaKnown RBP7.6□□□□□ -1.19
NF1-220ENST00000581113 MRS2Q9HD23 443 aa7.6□□□□□ -1.19
NF1-220ENST00000581113 SEC31BQ9NQW1 1179 aa7.6□□□□□ -1.19
NF1-220ENST00000581113 SOX1O00570 391 aaPredicted RBP7.59□□□□□ -1.19
NF1-220ENST00000581113 ESRRAP11474 423 aaPredicted RBP7.59□□□□□ -1.19
NF1-220ENST00000581113 ZNF16P17020 682 aaPredicted RBP7.59□□□□□ -1.19
NF1-220ENST00000581113 ARL4DP49703 201 aa7.59□□□□□ -1.19
NF1-220ENST00000581113 DAB2P98082 770 aa7.59□□□□□ -1.19
NF1-220ENST00000581113 PTPN12Q05209 780 aaKnown RBP7.59□□□□□ -1.19
NF1-220ENST00000581113 KCNMA1Q12791 1236 aa7.59□□□□□ -1.19
NF1-220ENST00000581113 ALYREFQ86V81 257 aaKnown RBP7.59□□□□□ -1.19
NF1-220ENST00000581113 GALNT11Q8NCW6 608 aa7.59□□□□□ -1.19
NF1-220ENST00000581113 FAM8A1Q9UBU6 413 aa7.59□□□□□ -1.19
NF1-220ENST00000581113 AK5Q9Y6K8 562 aa7.59□□□□□ -1.19
NF1-220ENST00000581113 USP17L7P0C7H9 530 aa7.58□□□□□ -1.2
NF1-220ENST00000581113 XRCC5P13010 732 aaKnown RBP7.58□□□□□ -1.2
NF1-220ENST00000581113 RASSF7Q02833 373 aa7.58□□□□□ -1.2
NF1-220ENST00000581113 HGSNATQ68CP4 663 aa7.58□□□□□ -1.2
NF1-220ENST00000581113 TMC4Q7Z404 712 aa7.58□□□□□ -1.2
NF1-220ENST00000581113 KLHL23Q8NBE8 558 aa7.58□□□□□ -1.2
NF1-220ENST00000581113 WNT8BQ93098 351 aa7.58□□□□□ -1.2
NF1-220ENST00000581113 DCAF5Q96JK2 942 aa7.58□□□□□ -1.2
NF1-220ENST00000581113 SORBS3O60504 671 aa7.57□□□□□ -1.2
NF1-220ENST00000581113 APBA3O96018 575 aa7.57□□□□□ -1.2
NF1-220ENST00000581113 ZNF157P51786 506 aaPredicted RBP7.57□□□□□ -1.2
NF1-220ENST00000581113 C19orf57Q0VDD7 668 aa7.57□□□□□ -1.2
NF1-220ENST00000581113 ZNF423Q2M1K9 1284 aa7.57□□□□□ -1.2
NF1-220ENST00000581113 SHISA2Q6UWI4 295 aa7.57□□□□□ -1.2
NF1-220ENST00000581113 C3orf58Q8NDZ4 430 aa7.57□□□□□ -1.2
NF1-220ENST00000581113 DCAF11Q8TEB1 546 aa7.57□□□□□ -1.2
NF1-220ENST00000581113 KLHDC7BQ96G42 594 aa7.57□□□□□ -1.2
NF1-220ENST00000581113 BCL11AQ9H165 835 aa7.57□□□□□ -1.2
NF1-220ENST00000581113 ZFYVE1Q9HBF4 777 aa7.57□□□□□ -1.2
NF1-220ENST00000581113 DLL1O00548 723 aa7.56□□□□□ -1.2
NF1-220ENST00000581113 GDF11O95390 407 aa7.56□□□□□ -1.2
NF1-220ENST00000581113 CD68P34810 354 aaPredicted RBP7.56□□□□□ -1.2
NF1-220ENST00000581113 GSK3AP49840 483 aa7.56□□□□□ -1.2
NF1-220ENST00000581113 NLRP12P59046 1061 aa7.56□□□□□ -1.2
NF1-220ENST00000581113 GSTM4Q03013 218 aa7.56□□□□□ -1.2
NF1-220ENST00000581113 OSGEPQ9NPF4 335 aa7.56□□□□□ -1.2
NF1-220ENST00000581113 VTI1BQ9UEU0 232 aa7.56□□□□□ -1.2
NF1-220ENST00000581113 GPN3Q9UHW5 284 aaPredicted RBP7.56□□□□□ -1.2
NF1-220ENST00000581113 RBM47A0AV96 593 aaKnown RBP7.55□□□□□ -1.2
NF1-220ENST00000581113 KRBA1A5PL33 1030 aa7.55□□□□□ -1.2
NF1-220ENST00000581113 DDX3YO15523 660 aaKnown RBP7.55□□□□□ -1.2
NF1-220ENST00000581113 B3GALT4O96024 378 aa7.55□□□□□ -1.2
NF1-220ENST00000581113 FAAP100Q0VG06 881 aa7.55□□□□□ -1.2
NF1-220ENST00000581113 SUZ12Q15022 739 aaKnown RBP7.55□□□□□ -1.2
NF1-220ENST00000581113 FOXD4L6Q3SYB3 417 aaPredicted RBP7.55□□□□□ -1.2
NF1-220ENST00000581113 RPS26P11Q5JNZ5 115 aaPredicted RBP7.55□□□□□ -1.2
NF1-220ENST00000581113 FOXD4L3Q6VB84 417 aaPredicted RBP7.55□□□□□ -1.2
NF1-220ENST00000581113 USP21Q9UK80 565 aa7.55□□□□□ -1.2
NF1-220ENST00000581113 FBXO24O75426 580 aa7.55□□□□□ -1.2
NF1-220ENST00000581113 SELPP16109 830 aa7.55□□□□□ -1.2
NF1-220ENST00000581113 IGF2-ASQ6U949 168 aa7.55□□□□□ -1.2
NF1-220ENST00000581113 TPTE2Q6XPS3 522 aa7.55□□□□□ -1.2
NF1-220ENST00000581113 TMEM151AQ8N4L1 468 aa7.55□□□□□ -1.2
NF1-220ENST00000581113 NACC1Q96RE7 527 aa7.55□□□□□ -1.2
NF1-220ENST00000581113 SOX17Q9H6I2 414 aaPredicted RBP7.55□□□□□ -1.2
NF1-220ENST00000581113 KCNK4Q9NYG8 393 aa7.55□□□□□ -1.2
NF1-220ENST00000581113 TM4SF5O14894 197 aa7.54□□□□□ -1.2
NF1-220ENST00000581113 ADAM11O75078 769 aa7.54□□□□□ -1.2
NF1-220ENST00000581113 ITGAEP38570 1179 aa7.54□□□□□ -1.2
NF1-220ENST00000581113 DDX54Q8TDD1 881 aaKnown RBP7.54□□□□□ -1.2
NF1-220ENST00000581113 TTF2Q9UNY4 1162 aaKnown RBP7.54□□□□□ -1.2
NF1-220ENST00000581113 PPP2R3AQ06190 1150 aa7.53□□□□□ -1.2
NF1-220ENST00000581113 DUOXA2Q1HG44 320 aa7.53□□□□□ -1.2
NF1-220ENST00000581113 LENG1Q96BZ8 264 aaPredicted RBP7.53□□□□□ -1.2
NF1-220ENST00000581113 USP26Q9BXU7 913 aa7.53□□□□□ -1.2
NF1-220ENST00000581113 TMEM39AQ9NV64 488 aa7.53□□□□□ -1.2
NF1-220ENST00000581113 PPM1HQ9ULR3 514 aa7.53□□□□□ -1.2
NF1-220ENST00000581113 C9orf172C9J069 976 aa7.52□□□□□ -1.21
NF1-220ENST00000581113 WISP1O95388 367 aa7.52□□□□□ -1.21
NF1-220ENST00000581113 CHRNA4P43681 627 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms