RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 COA1Q9GZY4 146 aa13.86□□□□□ -0.19
TOP3A-210ENST00000580713 HTTP42858 3142 aa13.86□□□□□ -0.19
TOP3A-210ENST00000580713 CEP290O15078 2479 aa13.86□□□□□ -0.19
TOP3A-210ENST00000580713 HOXB7P09629 217 aa13.85□□□□□ -0.19
TOP3A-210ENST00000580713 CCT4P50991 539 aaKnown RBP13.85□□□□□ -0.19
TOP3A-210ENST00000580713 RALBP1Q15311 655 aa13.85□□□□□ -0.19
TOP3A-210ENST00000580713 DLGAP5Q15398 846 aa13.85□□□□□ -0.19
TOP3A-210ENST00000580713 CCDC191Q8NCU4 936 aa13.85□□□□□ -0.19
TOP3A-210ENST00000580713 MINPP1Q9UNW1 487 aa13.85□□□□□ -0.19
TOP3A-210ENST00000580713 RBBP6Q7Z6E9 1792 aaKnown RBP13.84□□□□□ -0.19
TOP3A-210ENST00000580713 IREB2P48200 963 aaKnown RBP13.84□□□□□ -0.19
TOP3A-210ENST00000580713 GTF2IP78347 998 aa13.84□□□□□ -0.19
TOP3A-210ENST00000580713 MAP3K11Q16584 847 aa13.84□□□□□ -0.19
TOP3A-210ENST00000580713 SUPT20HL1Q3ZLR7 823 aa13.84□□□□□ -0.19
TOP3A-210ENST00000580713 OTUD5Q96G74 571 aa13.84□□□□□ -0.19
TOP3A-210ENST00000580713 CWC25Q9NXE8 425 aaPredicted RBP13.84□□□□□ -0.19
TOP3A-210ENST00000580713 PTCH2Q9Y6C5 1203 aa13.84□□□□□ -0.19
TOP3A-210ENST00000580713 DUSP27Q5VZP5 1158 aa13.83□□□□□ -0.2
TOP3A-210ENST00000580713 BSDC1Q9NW68 430 aaPredicted RBP13.83□□□□□ -0.2
TOP3A-210ENST00000580713 COL1A1P02452 1464 aaPredicted RBP13.82□□□□□ -0.2
TOP3A-210ENST00000580713 CCER2I3L3R5 266 aa13.82□□□□□ -0.2
TOP3A-210ENST00000580713 GJA5P36382 358 aa13.82□□□□□ -0.2
TOP3A-210ENST00000580713 CTSWP56202 376 aa13.82□□□□□ -0.2
TOP3A-210ENST00000580713 CAP1Q01518 475 aa13.82□□□□□ -0.2
TOP3A-210ENST00000580713 TXNRD3Q86VQ6 643 aa13.82□□□□□ -0.2
TOP3A-210ENST00000580713 IFNLR1Q8IU57 520 aaPredicted RBP13.82□□□□□ -0.2
TOP3A-210ENST00000580713 DPF3Q92784 378 aa13.82□□□□□ -0.2
TOP3A-210ENST00000580713 ZBED3Q96IU2 234 aaPredicted RBP13.82□□□□□ -0.2
TOP3A-210ENST00000580713 PTPN18Q99952 460 aa13.82□□□□□ -0.2
TOP3A-210ENST00000580713 PHAXQ9H814 394 aaKnown RBP13.82□□□□□ -0.2
TOP3A-210ENST00000580713 VEZTQ9HBM0 779 aa13.82□□□□□ -0.2
TOP3A-210ENST00000580713 LEMD3Q9Y2U8 911 aa13.82□□□□□ -0.2
TOP3A-210ENST00000580713 PPP2R3BQ9Y5P8 575 aa13.82□□□□□ -0.2
TOP3A-210ENST00000580713 CENPFP49454 3210 aa13.82□□□□□ -0.2
TOP3A-210ENST00000580713 CLRN2A0PK11 232 aa13.81□□□□□ -0.2
TOP3A-210ENST00000580713 UNCXA6NJT0 531 aa13.81□□□□□ -0.2
TOP3A-210ENST00000580713 HAX1O00165 279 aa13.81□□□□□ -0.2
TOP3A-210ENST00000580713 MYO1BO43795 1136 aa13.81□□□□□ -0.2
TOP3A-210ENST00000580713 TAF1CQ15572 869 aaPredicted RBP13.81□□□□□ -0.2
TOP3A-210ENST00000580713 NBPF12Q5TAG4 269 aaPredicted RBP13.81□□□□□ -0.2
TOP3A-210ENST00000580713 ANKRD13AQ8IZ07 590 aa13.81□□□□□ -0.2
TOP3A-210ENST00000580713 ZFYVE28Q9HCC9 887 aa13.81□□□□□ -0.2
TOP3A-210ENST00000580713 F8W031 263 aaPredicted RBP13.8□□□□□ -0.2
TOP3A-210ENST00000580713 USP2O75604 605 aaPredicted RBP13.8□□□□□ -0.2
TOP3A-210ENST00000580713 KCNJ4P48050 445 aa13.8□□□□□ -0.2
TOP3A-210ENST00000580713 CCDC146Q8IYE0 955 aa13.8□□□□□ -0.2
TOP3A-210ENST00000580713 PLCD3Q8N3E9 789 aa13.8□□□□□ -0.2
TOP3A-210ENST00000580713 SH3TC2Q8TF17 1288 aa13.8□□□□□ -0.2
TOP3A-210ENST00000580713 OPTNQ96CV9 577 aa13.8□□□□□ -0.2
TOP3A-210ENST00000580713 GREM2Q9H772 168 aa13.8□□□□□ -0.2
TOP3A-210ENST00000580713 ELP3Q9H9T3 547 aa13.8□□□□□ -0.2
TOP3A-210ENST00000580713 RBM27Q9P2N5 1060 aaKnown RBP13.8□□□□□ -0.2
TOP3A-210ENST00000580713 MYBBP1AQ9BQG0 1328 aaKnown RBP13.8□□□□□ -0.2
TOP3A-210ENST00000580713 SSC5DA1L4H1 1573 aa13.79□□□□□ -0.2
TOP3A-210ENST00000580713 TESPA1A2RU30 521 aaPredicted RBP13.79□□□□□ -0.2
TOP3A-210ENST00000580713 KLRK1P26718 216 aa13.79□□□□□ -0.2
TOP3A-210ENST00000580713 IGHMBP2P38935 993 aaKnown RBP13.79□□□□□ -0.2
TOP3A-210ENST00000580713 TTLL11Q8NHH1 800 aa13.79□□□□□ -0.2
TOP3A-210ENST00000580713 PCDHAC2Q9Y5I4 1007 aa13.79□□□□□ -0.2
TOP3A-210ENST00000580713 ZNF804BA4D1E1 1349 aa13.79□□□□□ -0.2
TOP3A-210ENST00000580713 ELL2O00472 640 aaPredicted RBP13.78□□□□□ -0.2
TOP3A-210ENST00000580713 WDHD1O75717 1129 aaPredicted RBP13.78□□□□□ -0.2
TOP3A-210ENST00000580713 DDX58O95786 925 aaKnown RBP13.78□□□□□ -0.2
TOP3A-210ENST00000580713 RBM5P52756 815 aaKnown RBP eCLIP13.78□□□□□ -0.2
TOP3A-210ENST00000580713 KIF22Q14807 665 aa13.78□□□□□ -0.2
TOP3A-210ENST00000580713 CFAP100Q494V2 611 aa13.78□□□□□ -0.2
TOP3A-210ENST00000580713 METTL22Q9BUU2 404 aaPredicted RBP13.78□□□□□ -0.2
TOP3A-210ENST00000580713 ANKRD2Q9GZV1 360 aa13.78□□□□□ -0.2
TOP3A-210ENST00000580713 CCL15-CCL14A0A0B4J2E2 113 aa13.77□□□□□ -0.21
TOP3A-210ENST00000580713 RASA3Q14644 834 aa13.77□□□□□ -0.21
TOP3A-210ENST00000580713 CCL15Q16663 113 aa13.77□□□□□ -0.21
TOP3A-210ENST00000580713 MTMR14Q8NCE2 650 aa13.77□□□□□ -0.21
TOP3A-210ENST00000580713 BRI3BPQ8WY22 251 aa13.77□□□□□ -0.21
TOP3A-210ENST00000580713 MPHOSPH8Q99549 860 aa13.77□□□□□ -0.21
TOP3A-210ENST00000580713 CD209Q9NNX6 404 aa13.77□□□□□ -0.21
TOP3A-210ENST00000580713 TRIM35Q9UPQ4 493 aa13.77□□□□□ -0.21
TOP3A-210ENST00000580713 ECM2O94769 699 aaPredicted RBP13.76□□□□□ -0.21
TOP3A-210ENST00000580713 CERS5Q8N5B7 392 aa13.76□□□□□ -0.21
TOP3A-210ENST00000580713 MS4A4AQ96JQ5 239 aa13.76□□□□□ -0.21
TOP3A-210ENST00000580713 PRMT6Q96LA8 375 aaPredicted RBP13.76□□□□□ -0.21
TOP3A-210ENST00000580713 BRCA2P51587 3418 aa13.76□□□□□ -0.21
TOP3A-210ENST00000580713 GTF2A2P52657 109 aa13.75□□□□□ -0.21
TOP3A-210ENST00000580713 ARHGAP39Q9C0H5 1083 aa13.75□□□□□ -0.21
TOP3A-210ENST00000580713 MBIPQ9NS73 344 aa13.75□□□□□ -0.21
TOP3A-210ENST00000580713 MAP3K2Q9Y2U5 619 aa13.75□□□□□ -0.21
TOP3A-210ENST00000580713 ZNF646O15015 1829 aaPredicted RBP13.74□□□□□ -0.21
TOP3A-210ENST00000580713 SPEF2Q9C093 1822 aa13.74□□□□□ -0.21
TOP3A-210ENST00000580713 SZT2Q5T011 3432 aa13.74□□□□□ -0.21
TOP3A-210ENST00000580713 NEXNQ0ZGT2 675 aa13.74□□□□□ -0.21
TOP3A-210ENST00000580713 FAM43AQ8N2R8 423 aa13.74□□□□□ -0.21
TOP3A-210ENST00000580713 RUNDC1Q96C34 613 aa13.74□□□□□ -0.21
TOP3A-210ENST00000580713 HTATIP2Q9BUP3 242 aa13.74□□□□□ -0.21
TOP3A-210ENST00000580713 MRS2Q9HD23 443 aa13.74□□□□□ -0.21
TOP3A-210ENST00000580713 NR2E3Q9Y5X4 410 aa13.74□□□□□ -0.21
TOP3A-210ENST00000580713 CSADQ9Y600 493 aa13.74□□□□□ -0.21
TOP3A-210ENST00000580713 AOX1Q06278 1338 aa13.73□□□□□ -0.21
TOP3A-210ENST00000580713 ITGA6P23229 1130 aa13.73□□□□□ -0.21
TOP3A-210ENST00000580713 MAP3K9P80192 1104 aa13.73□□□□□ -0.21
TOP3A-210ENST00000580713 TNFAIP1Q13829 316 aa13.73□□□□□ -0.21
TOP3A-210ENST00000580713 MTFR1Q15390 333 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms