RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 SNAP23O00161 211 aa24.79■■□□□ 1.56
LIMD2-209ENST00000580222 MYCP01106 439 aaPredicted RBP24.79■■□□□ 1.56
LIMD2-209ENST00000580222 MMP14P50281 582 aa24.79■■□□□ 1.56
LIMD2-209ENST00000580222 DLGAP5Q15398 846 aa24.79■■□□□ 1.56
LIMD2-209ENST00000580222 TMEM106CQ9BVX2 250 aa24.79■■□□□ 1.56
LIMD2-209ENST00000580222 LEMD3Q9Y2U8 911 aa24.79■■□□□ 1.56
LIMD2-209ENST00000580222 SALL2Q9Y467 1007 aaPredicted RBP24.79■■□□□ 1.56
LIMD2-209ENST00000580222 PTCH2Q9Y6C5 1203 aa24.79■■□□□ 1.56
LIMD2-209ENST00000580222 RBBP6Q7Z6E9 1792 aaKnown RBP24.79■■□□□ 1.56
LIMD2-209ENST00000580222 PPP1R12BO60237 982 aaPredicted RBP24.78■■□□□ 1.56
LIMD2-209ENST00000580222 ZNF853P0CG23 659 aa24.78■■□□□ 1.56
LIMD2-209ENST00000580222 ZNF804BA4D1E1 1349 aa24.78■■□□□ 1.56
LIMD2-209ENST00000580222 PRMT6Q96LA8 375 aaPredicted RBP24.77■■□□□ 1.56
LIMD2-209ENST00000580222 MAP3K2Q9Y2U5 619 aa24.77■■□□□ 1.56
LIMD2-209ENST00000580222 MTMR14Q8NCE2 650 aa24.76■■□□□ 1.55
LIMD2-209ENST00000580222 CNKSR2Q8WXI2 1034 aa24.76■■□□□ 1.55
LIMD2-209ENST00000580222 MS4A4AQ96JQ5 239 aa24.76■■□□□ 1.55
LIMD2-209ENST00000580222 CD209Q9NNX6 404 aa24.76■■□□□ 1.55
LIMD2-209ENST00000580222 COL1A1P02452 1464 aaPredicted RBP24.76■■□□□ 1.55
LIMD2-209ENST00000580222 C8orf58Q8NAV2 365 aa24.75■■□□□ 1.55
LIMD2-209ENST00000580222 IRS2Q9Y4H2 1338 aa24.75■■□□□ 1.55
LIMD2-209ENST00000580222 F8W031 263 aaPredicted RBP24.74■■□□□ 1.55
LIMD2-209ENST00000580222 NCBP3Q53F19 620 aaKnown RBP24.74■■□□□ 1.55
LIMD2-209ENST00000580222 OTUD7BQ6GQQ9 843 aa24.74■■□□□ 1.55
LIMD2-209ENST00000580222 ELP3Q9H9T3 547 aa24.74■■□□□ 1.55
LIMD2-209ENST00000580222 PPP2R3BQ9Y5P8 575 aa24.74■■□□□ 1.55
LIMD2-209ENST00000580222 SPDYE2BA6NHP3 402 aa24.73■■□□□ 1.55
LIMD2-209ENST00000580222 UNCXA6NJT0 531 aa24.73■■□□□ 1.55
LIMD2-209ENST00000580222 SPDYE6P0CI01 402 aa24.73■■□□□ 1.55
LIMD2-209ENST00000580222 CCDC27Q2M243 656 aa24.73■■□□□ 1.55
LIMD2-209ENST00000580222 CWF19L2Q2TBE0 894 aaKnown RBP24.73■■□□□ 1.55
LIMD2-209ENST00000580222 SLC4A8Q2Y0W8 1093 aa24.73■■□□□ 1.55
LIMD2-209ENST00000580222 SUPT20HL1Q3ZLR7 823 aa24.73■■□□□ 1.55
LIMD2-209ENST00000580222 CFAP100Q494V2 611 aa24.73■■□□□ 1.55
LIMD2-209ENST00000580222 SLC9C1Q4G0N8 1177 aa24.73■■□□□ 1.55
LIMD2-209ENST00000580222 CHRDL2Q6WN34 429 aa24.73■■□□□ 1.55
LIMD2-209ENST00000580222 CDAN1Q8IWY9 1227 aa24.73■■□□□ 1.55
LIMD2-209ENST00000580222 BRI3BPQ8WY22 251 aa24.73■■□□□ 1.55
LIMD2-209ENST00000580222 HNRNPUQ00839 825 aaKnown RBP eCLIP24.72■■□□□ 1.55
LIMD2-209ENST00000580222 RASA3Q14644 834 aa24.72■■□□□ 1.55
LIMD2-209ENST00000580222 SH3TC2Q8TF17 1288 aa24.72■■□□□ 1.55
LIMD2-209ENST00000580222 OPTNQ96CV9 577 aa24.72■■□□□ 1.55
LIMD2-209ENST00000580222 VEZTQ9HBM0 779 aa24.72■■□□□ 1.55
LIMD2-209ENST00000580222 PI4KAP2A4QPH2 592 aa24.71■■□□□ 1.55
LIMD2-209ENST00000580222 IREB2P48200 963 aaKnown RBP24.71■■□□□ 1.55
LIMD2-209ENST00000580222 ANKRD13AQ8IZ07 590 aa24.71■■□□□ 1.55
LIMD2-209ENST00000580222 PI4KAP1Q8N8J0 262 aa24.71■■□□□ 1.55
LIMD2-209ENST00000580222 ARHGAP39Q9C0H5 1083 aa24.71■■□□□ 1.55
LIMD2-209ENST00000580222 JAG2Q9Y219 1238 aa24.71■■□□□ 1.55
LIMD2-209ENST00000580222 H7C1W4 665 aa24.7■■□□□ 1.54
LIMD2-209ENST00000580222 IGHMBP2P38935 993 aaKnown RBP24.7■■□□□ 1.54
LIMD2-209ENST00000580222 WWC1Q8IX03 1113 aa24.7■■□□□ 1.54
LIMD2-209ENST00000580222 RBM27Q9P2N5 1060 aaKnown RBP24.7■■□□□ 1.54
LIMD2-209ENST00000580222 ITGA6P23229 1130 aa24.69■■□□□ 1.54
LIMD2-209ENST00000580222 CALD1Q05682 793 aaKnown RBP24.69■■□□□ 1.54
LIMD2-209ENST00000580222 CHRNDQ07001 517 aa24.69■■□□□ 1.54
LIMD2-209ENST00000580222 KSR2Q6VAB6 950 aa24.69■■□□□ 1.54
LIMD2-209ENST00000580222 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.69■■□□□ 1.54
LIMD2-209ENST00000580222 UBE3BQ7Z3V4 1068 aa24.69■■□□□ 1.54
LIMD2-209ENST00000580222 NBPF11Q86T75 865 aa24.69■■□□□ 1.54
LIMD2-209ENST00000580222 FAM43AQ8N2R8 423 aa24.69■■□□□ 1.54
LIMD2-209ENST00000580222 ANKRD2Q9GZV1 360 aa24.69■■□□□ 1.54
LIMD2-209ENST00000580222 COL6A3P12111 3177 aa24.69■■□□□ 1.54
LIMD2-209ENST00000580222 TAF5LO75529 589 aa24.68■■□□□ 1.54
LIMD2-209ENST00000580222 DDX58O95786 925 aaKnown RBP24.68■■□□□ 1.54
LIMD2-209ENST00000580222 HELBQ8NG08 1087 aaPredicted RBP24.68■■□□□ 1.54
LIMD2-209ENST00000580222 SPEF2Q9C093 1822 aa24.68■■□□□ 1.54
LIMD2-209ENST00000580222 LAMB1P07942 1786 aa24.67■■□□□ 1.54
LIMD2-209ENST00000580222 NEURL1BA8MQ27 555 aa24.67■■□□□ 1.54
LIMD2-209ENST00000580222 TAF1CQ15572 869 aaPredicted RBP24.67■■□□□ 1.54
LIMD2-209ENST00000580222 TSPYL6Q8N831 410 aa24.67■■□□□ 1.54
LIMD2-209ENST00000580222 DLL1O00548 723 aa24.66■■□□□ 1.54
LIMD2-209ENST00000580222 SHISA4Q96DD7 197 aa24.66■■□□□ 1.54
LIMD2-209ENST00000580222 TEPSINQ96N21 525 aa24.66■■□□□ 1.54
LIMD2-209ENST00000580222 CCL15-CCL14A0A0B4J2E2 113 aa24.65■■□□□ 1.54
LIMD2-209ENST00000580222 KCNJ4P48050 445 aa24.65■■□□□ 1.54
LIMD2-209ENST00000580222 CASP7P55210 303 aa24.65■■□□□ 1.54
LIMD2-209ENST00000580222 CCL15Q16663 113 aa24.65■■□□□ 1.54
LIMD2-209ENST00000580222 ZFYVE28Q9HCC9 887 aa24.65■■□□□ 1.54
LIMD2-209ENST00000580222 IFT57Q9NWB7 429 aa24.65■■□□□ 1.54
LIMD2-209ENST00000580222 MYO1BO43795 1136 aa24.64■■□□□ 1.54
LIMD2-209ENST00000580222 CSF1RP07333 972 aa24.64■■□□□ 1.54
LIMD2-209ENST00000580222 IL1R1P14778 569 aa24.64■■□□□ 1.54
LIMD2-209ENST00000580222 MTFR1Q15390 333 aa24.64■■□□□ 1.54
LIMD2-209ENST00000580222 G2E3Q7L622 706 aa24.64■■□□□ 1.54
LIMD2-209ENST00000580222 MPHOSPH8Q99549 860 aa24.64■■□□□ 1.54
LIMD2-209ENST00000580222 VGLL4Q14135 290 aa24.63■■□□□ 1.53
LIMD2-209ENST00000580222 CCDC30Q5VVM6 783 aa24.63■■□□□ 1.53
LIMD2-209ENST00000580222 C15orf52Q6ZUT6 534 aaKnown RBP24.63■■□□□ 1.53
LIMD2-209ENST00000580222 PLA2G12BQ9BX93 195 aa24.63■■□□□ 1.53
LIMD2-209ENST00000580222 ZNF70Q9UC06 446 aaPredicted RBP24.63■■□□□ 1.53
LIMD2-209ENST00000580222 ECM2O94769 699 aaPredicted RBP24.62■■□□□ 1.53
LIMD2-209ENST00000580222 RBM5P52756 815 aaKnown RBP eCLIP24.62■■□□□ 1.53
LIMD2-209ENST00000580222 WDR63Q8IWG1 891 aa24.62■■□□□ 1.53
LIMD2-209ENST00000580222 PRO3102Q9H379 93 aa24.62■■□□□ 1.53
LIMD2-209ENST00000580222 IL16Q14005 1332 aa24.61■■□□□ 1.53
LIMD2-209ENST00000580222 ZNF521Q96K83 1311 aa24.61■■□□□ 1.53
LIMD2-209ENST00000580222 LAMA3Q16787 3333 aa24.61■■□□□ 1.53
LIMD2-209ENST00000580222 CTGFP29279 349 aa24.61■■□□□ 1.53
LIMD2-209ENST00000580222 GNAI1P63096 354 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms