RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 MYO5BQ9ULV0 1848 aa6.64□□□□□ -1.35
CDH8-206ENST00000580044 TMEM131LA2VDJ0 1609 aa6.63□□□□□ -1.35
CDH8-206ENST00000580044 MTHFSP49914 203 aa6.63□□□□□ -1.35
CDH8-206ENST00000580044 CALD1Q05682 793 aaKnown RBP6.63□□□□□ -1.35
CDH8-206ENST00000580044 TEAD4Q15561 434 aa6.63□□□□□ -1.35
CDH8-206ENST00000580044 XP32Q5T750 250 aa6.63□□□□□ -1.35
CDH8-206ENST00000580044 RICTORQ6R327 1708 aa6.63□□□□□ -1.35
CDH8-206ENST00000580044 LRRC69Q6ZNQ3 347 aa6.63□□□□□ -1.35
CDH8-206ENST00000580044 SYT9Q86SS6 491 aa6.63□□□□□ -1.35
CDH8-206ENST00000580044 FCHSD1Q86WN1 690 aa6.63□□□□□ -1.35
CDH8-206ENST00000580044 HSCBQ8IWL3 235 aa6.63□□□□□ -1.35
CDH8-206ENST00000580044 RHPN1Q8TCX5 695 aa6.63□□□□□ -1.35
CDH8-206ENST00000580044 SEMA6BQ9H3T3 888 aa6.63□□□□□ -1.35
CDH8-206ENST00000580044 SCHIP1Q9P0W5 487 aaPredicted RBP6.63□□□□□ -1.35
CDH8-206ENST00000580044 PCDHGA11Q9Y5H2 935 aa6.63□□□□□ -1.35
CDH8-206ENST00000580044 DLC1Q96QB1 1528 aa6.62□□□□□ -1.35
CDH8-206ENST00000580044 GOLGA6L3A6NEY3 463 aa6.62□□□□□ -1.35
CDH8-206ENST00000580044 SIN3BO75182 1162 aa6.62□□□□□ -1.35
CDH8-206ENST00000580044 U2AF1L5P0DN76 240 aaPredicted RBP6.62□□□□□ -1.35
CDH8-206ENST00000580044 U2AF1Q01081 240 aaKnown RBP eCLIP6.62□□□□□ -1.35
CDH8-206ENST00000580044 NCOA4Q13772 614 aa6.62□□□□□ -1.35
CDH8-206ENST00000580044 HIF1AQ16665 826 aa6.62□□□□□ -1.35
CDH8-206ENST00000580044 ALDH1L2Q3SY69 923 aa6.62□□□□□ -1.35
CDH8-206ENST00000580044 ATF7IPQ6VMQ6 1270 aa6.62□□□□□ -1.35
CDH8-206ENST00000580044 SMC5Q8IY18 1101 aa6.62□□□□□ -1.35
CDH8-206ENST00000580044 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.62□□□□□ -1.35
CDH8-206ENST00000580044 C22orf23Q9BZE7 217 aa6.62□□□□□ -1.35
CDH8-206ENST00000580044 TERF2IPQ9NYB0 399 aa6.62□□□□□ -1.35
CDH8-206ENST00000580044 IQSEC3Q9UPP2 1182 aaPredicted RBP6.62□□□□□ -1.35
CDH8-206ENST00000580044 TRAK1Q9UPV9 953 aa6.62□□□□□ -1.35
CDH8-206ENST00000580044 LRRC7Q96NW7 1537 aa6.61□□□□□ -1.35
CDH8-206ENST00000580044 PTPRMP28827 1452 aa6.61□□□□□ -1.35
CDH8-206ENST00000580044 ATP7BP35670 1465 aa6.61□□□□□ -1.35
CDH8-206ENST00000580044 RLBP1P12271 317 aa6.61□□□□□ -1.35
CDH8-206ENST00000580044 MCM4P33991 863 aa6.61□□□□□ -1.35
CDH8-206ENST00000580044 RBM25P49756 843 aaKnown RBP6.61□□□□□ -1.35
CDH8-206ENST00000580044 MRE11P49959 708 aa6.61□□□□□ -1.35
CDH8-206ENST00000580044 DOC2BQ14184 412 aa6.61□□□□□ -1.35
CDH8-206ENST00000580044 SKOR2Q2VWA4 1001 aaPredicted RBP6.61□□□□□ -1.35
CDH8-206ENST00000580044 Q8N3U1 123 aa6.61□□□□□ -1.35
CDH8-206ENST00000580044 SNX21Q969T3 373 aa6.61□□□□□ -1.35
CDH8-206ENST00000580044 CEP63Q96MT8 703 aa6.61□□□□□ -1.35
CDH8-206ENST00000580044 SLKQ9H2G2 1235 aaPredicted RBP6.61□□□□□ -1.35
CDH8-206ENST00000580044 SLC12A5Q9H2X9 1139 aa6.61□□□□□ -1.35
CDH8-206ENST00000580044 SMC4Q9NTJ3 1288 aa6.61□□□□□ -1.35
CDH8-206ENST00000580044 ZNF358Q9NW07 568 aa6.61□□□□□ -1.35
CDH8-206ENST00000580044 CD109Q6YHK3 1445 aa6.6□□□□□ -1.35
CDH8-206ENST00000580044 A0A1W2PP64 1363 aa6.6□□□□□ -1.35
CDH8-206ENST00000580044 ITSN1Q15811 1721 aa6.6□□□□□ -1.35
CDH8-206ENST00000580044 FSD2A1L4K1 749 aa6.6□□□□□ -1.35
CDH8-206ENST00000580044 HOXB4P17483 251 aaPredicted RBP6.6□□□□□ -1.35
CDH8-206ENST00000580044 CHRNA4P43681 627 aa6.6□□□□□ -1.35
CDH8-206ENST00000580044 PSMA6P60900 246 aaKnown RBP6.6□□□□□ -1.35
CDH8-206ENST00000580044 MCM6Q14566 821 aa6.6□□□□□ -1.35
CDH8-206ENST00000580044 SLC9A9Q8IVB4 645 aa6.6□□□□□ -1.35
CDH8-206ENST00000580044 ITPRIPQ8IWB1 547 aa6.6□□□□□ -1.35
CDH8-206ENST00000580044 ARHGAP45Q92619 1136 aa6.6□□□□□ -1.35
CDH8-206ENST00000580044 GCC1Q96CN9 775 aa6.6□□□□□ -1.35
CDH8-206ENST00000580044 GBP4Q96PP9 640 aa6.6□□□□□ -1.35
CDH8-206ENST00000580044 SLC52A1Q9NWF4 448 aa6.6□□□□□ -1.35
CDH8-206ENST00000580044 POGKQ9P215 609 aa6.6□□□□□ -1.35
CDH8-206ENST00000580044 RRP7AQ9Y3A4 280 aaKnown RBP6.6□□□□□ -1.35
CDH8-206ENST00000580044 PTCH1Q13635 1447 aa6.59□□□□□ -1.35
CDH8-206ENST00000580044 FAM135BQ49AJ0 1406 aa6.59□□□□□ -1.35
CDH8-206ENST00000580044 KNDC1Q76NI1 1749 aa6.59□□□□□ -1.35
CDH8-206ENST00000580044 MON2Q7Z3U7 1717 aa6.59□□□□□ -1.35
CDH8-206ENST00000580044 KIF24Q5T7B8 1368 aa6.59□□□□□ -1.35
CDH8-206ENST00000580044 PNPLA6Q8IY17 1366 aa6.59□□□□□ -1.35
CDH8-206ENST00000580044 PIK3R4Q99570 1358 aa6.59□□□□□ -1.35
CDH8-206ENST00000580044 DLG5Q8TDM6 1919 aa6.59□□□□□ -1.35
CDH8-206ENST00000580044 USP17L5A8MUK1 530 aa6.59□□□□□ -1.35
CDH8-206ENST00000580044 EFSO43281 561 aa6.59□□□□□ -1.35
CDH8-206ENST00000580044 TRIM27P14373 513 aa6.59□□□□□ -1.35
CDH8-206ENST00000580044 TXLNAP40222 546 aa6.59□□□□□ -1.35
CDH8-206ENST00000580044 TMPOP42166 694 aaKnown RBP6.59□□□□□ -1.35
CDH8-206ENST00000580044 TNNT2P45379 298 aaPredicted RBP6.59□□□□□ -1.35
CDH8-206ENST00000580044 HDGFL2Q7Z4V5 671 aaPredicted RBP6.59□□□□□ -1.35
CDH8-206ENST00000580044 PLEKHF1Q96S99 279 aa6.59□□□□□ -1.35
CDH8-206ENST00000580044 MAP2P11137 1827 aaKnown RBP6.59□□□□□ -1.35
CDH8-206ENST00000580044 SETD1AO15047 1707 aaKnown RBP6.59□□□□□ -1.36
CDH8-206ENST00000580044 IBTKQ9P2D0 1353 aaPredicted RBP6.58□□□□□ -1.36
CDH8-206ENST00000580044 SCO2A0A1W2PP80 73 aa6.58□□□□□ -1.36
CDH8-206ENST00000580044 ADARB2-AS1A8MUL3 147 aa6.58□□□□□ -1.36
CDH8-206ENST00000580044 M0R082 166 aa6.58□□□□□ -1.36
CDH8-206ENST00000580044 PIK3CDO00329 1044 aa6.58□□□□□ -1.36
CDH8-206ENST00000580044 DIAPH1O60610 1272 aaKnown RBP6.58□□□□□ -1.36
CDH8-206ENST00000580044 MFAP1P55081 439 aaKnown RBP6.58□□□□□ -1.36
CDH8-206ENST00000580044 NUCB1Q02818 461 aa6.58□□□□□ -1.36
CDH8-206ENST00000580044 EXOSC9Q06265 439 aaKnown RBP6.58□□□□□ -1.36
CDH8-206ENST00000580044 LMOD3Q0VAK6 560 aa6.58□□□□□ -1.36
CDH8-206ENST00000580044 FLIIQ13045 1269 aa6.58□□□□□ -1.36
CDH8-206ENST00000580044 BMP2KLQ5H9B9 411 aa6.58□□□□□ -1.36
CDH8-206ENST00000580044 ZMYM1Q5SVZ6 1142 aa6.58□□□□□ -1.36
CDH8-206ENST00000580044 TRAPPC3LQ5T215 181 aa6.58□□□□□ -1.36
CDH8-206ENST00000580044 C1orf53Q5VUE5 145 aa6.58□□□□□ -1.36
CDH8-206ENST00000580044 TNS4Q8IZW8 715 aa6.58□□□□□ -1.36
CDH8-206ENST00000580044 TPCN2Q8NHX9 752 aa6.58□□□□□ -1.36
CDH8-206ENST00000580044 ZNF417Q8TAU3 575 aa6.58□□□□□ -1.36
CDH8-206ENST00000580044 ZNF587Q96SQ5 575 aaPredicted RBP6.58□□□□□ -1.36
CDH8-206ENST00000580044 ZBTB40Q9NUA8 1239 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms