RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 WWC3Q9ULE0 1092 aa24.18■■□□□ 1.46
SMG8-203ENST00000578922 RGPD3A6NKT7 1758 aaPredicted RBP24.18■■□□□ 1.46
SMG8-203ENST00000578922 RGPD4Q7Z3J3 1758 aa24.18■■□□□ 1.46
SMG8-203ENST00000578922 RBM17Q96I25 401 aaKnown RBP24.18■■□□□ 1.46
SMG8-203ENST00000578922 FAM84BQ96KN1 310 aaPredicted RBP24.18■■□□□ 1.46
SMG8-203ENST00000578922 TICAM2Q86XR7 235 aa24.17■■□□□ 1.46
SMG8-203ENST00000578922 APPBP2Q92624 585 aa24.17■■□□□ 1.46
SMG8-203ENST00000578922 STK32BQ9NY57 414 aa24.17■■□□□ 1.46
SMG8-203ENST00000578922 ZNF804BA4D1E1 1349 aa24.17■■□□□ 1.46
SMG8-203ENST00000578922 ADD2P35612 726 aa24.16■■□□□ 1.46
SMG8-203ENST00000578922 PARP3Q9Y6F1 533 aa24.16■■□□□ 1.46
SMG8-203ENST00000578922 RNF20Q5VTR2 975 aa24.16■■□□□ 1.46
SMG8-203ENST00000578922 KCNB2Q92953 911 aa24.16■■□□□ 1.46
SMG8-203ENST00000578922 HSPD1P10809 573 aaKnown RBP24.15■■□□□ 1.46
SMG8-203ENST00000578922 PDE6AP16499 860 aa24.15■■□□□ 1.46
SMG8-203ENST00000578922 ZSCAN25Q6NSZ9 544 aa24.15■■□□□ 1.46
SMG8-203ENST00000578922 GNL3LQ9NVN8 582 aaKnown RBP24.15■■□□□ 1.46
SMG8-203ENST00000578922 ZNF532Q9HCE3 1301 aa24.15■■□□□ 1.46
SMG8-203ENST00000578922 MYH7P12883 1935 aa24.15■■□□□ 1.46
SMG8-203ENST00000578922 GOLGA6L22H0YM25 854 aa24.15■■□□□ 1.46
SMG8-203ENST00000578922 TXNRD3Q86VQ6 643 aa24.15■■□□□ 1.46
SMG8-203ENST00000578922 U3KPZ7 1027 aaPredicted RBP24.15■■□□□ 1.46
SMG8-203ENST00000578922 COL9A3Q14050 684 aaPredicted RBP24.14■■□□□ 1.45
SMG8-203ENST00000578922 GPR101Q96P66 508 aaPredicted RBP24.14■■□□□ 1.45
SMG8-203ENST00000578922 BAG6P46379 1132 aa24.13■■□□□ 1.45
SMG8-203ENST00000578922 MAGEB6Q8N7X4 407 aa24.13■■□□□ 1.45
SMG8-203ENST00000578922 LARP6Q9BRS8 491 aaKnown RBP24.13■■□□□ 1.45
SMG8-203ENST00000578922 GRPEL1Q9HAV7 217 aa24.13■■□□□ 1.45
SMG8-203ENST00000578922 BRIP1Q9BX63 1249 aa24.13■■□□□ 1.45
SMG8-203ENST00000578922 ABCF2Q9UG63 623 aa24.13■■□□□ 1.45
SMG8-203ENST00000578922 COL1A1P02452 1464 aaPredicted RBP24.13■■□□□ 1.45
SMG8-203ENST00000578922 A0A0G2JLW4 131 aa24.12■■□□□ 1.45
SMG8-203ENST00000578922 GPAA1O43292 621 aa24.12■■□□□ 1.45
SMG8-203ENST00000578922 MAP3K12Q12852 859 aa24.12■■□□□ 1.45
SMG8-203ENST00000578922 DSCC1Q9BVC3 393 aa24.12■■□□□ 1.45
SMG8-203ENST00000578922 LRP2BPQ9P2M1 347 aa24.12■■□□□ 1.45
SMG8-203ENST00000578922 NSFL1CQ9UNZ2 370 aaKnown RBP24.12■■□□□ 1.45
SMG8-203ENST00000578922 CYP21A2P08686 494 aa24.12■■□□□ 1.45
SMG8-203ENST00000578922 HIBADHP31937 336 aaKnown RBP24.12■■□□□ 1.45
SMG8-203ENST00000578922 GPSM2P81274 684 aa24.12■■□□□ 1.45
SMG8-203ENST00000578922 FBXO33Q7Z6M2 555 aa24.12■■□□□ 1.45
SMG8-203ENST00000578922 KLRG2A4D1S0 409 aaPredicted RBP24.11■■□□□ 1.45
SMG8-203ENST00000578922 TMX3Q96JJ7 454 aa24.11■■□□□ 1.45
SMG8-203ENST00000578922 PDGFDQ9GZP0 370 aaPredicted RBP24.11■■□□□ 1.45
SMG8-203ENST00000578922 CYP46A1Q9Y6A2 500 aa24.11■■□□□ 1.45
SMG8-203ENST00000578922 TCRBV5S4A2TA0A5A2 114 aa24.1■■□□□ 1.45
SMG8-203ENST00000578922 HOXA10P31260 410 aaPredicted RBP24.1■■□□□ 1.45
SMG8-203ENST00000578922 NUCB2P80303 420 aa24.1■■□□□ 1.45
SMG8-203ENST00000578922 UBE3CQ15386 1083 aa24.1■■□□□ 1.45
SMG8-203ENST00000578922 ZSWIM6Q9HCJ5 1215 aa24.1■■□□□ 1.45
SMG8-203ENST00000578922 ANKRD31Q8N7Z5 1873 aa24.1■■□□□ 1.45
SMG8-203ENST00000578922 XDHP47989 1333 aa24.1■■□□□ 1.45
SMG8-203ENST00000578922 AK2P54819 239 aa24.1■■□□□ 1.45
SMG8-203ENST00000578922 TTLL5Q6EMB2 1281 aa24.1■■□□□ 1.45
SMG8-203ENST00000578922 TTC14Q96N46 770 aa24.1■■□□□ 1.45
SMG8-203ENST00000578922 JAG2Q9Y219 1238 aa24.1■■□□□ 1.45
SMG8-203ENST00000578922 FOXP2O15409 715 aa24.09■■□□□ 1.45
SMG8-203ENST00000578922 MCM2P49736 904 aa24.09■■□□□ 1.45
SMG8-203ENST00000578922 TCEANC2Q96MN5 208 aa24.09■■□□□ 1.45
SMG8-203ENST00000578922 CWC22Q9HCG8 908 aaKnown RBP24.09■■□□□ 1.45
SMG8-203ENST00000578922 PDRG1Q9NUG6 133 aa24.09■■□□□ 1.45
SMG8-203ENST00000578922 CHAF1AQ13111 956 aaPredicted RBP24.09■■□□□ 1.45
SMG8-203ENST00000578922 RUFY3Q7L099 469 aa24.09■■□□□ 1.45
SMG8-203ENST00000578922 CRAMP1Q96RY5 1269 aa24.09■■□□□ 1.45
SMG8-203ENST00000578922 TM6SF1Q9BZW5 370 aa24.09■■□□□ 1.45
SMG8-203ENST00000578922 BBOX1O75936 387 aa24.08■■□□□ 1.45
SMG8-203ENST00000578922 RAI14Q9P0K7 980 aa24.08■■□□□ 1.45
SMG8-203ENST00000578922 DENND2AQ9ULE3 1009 aa24.08■■□□□ 1.45
SMG8-203ENST00000578922 RPAP1Q9BWH6 1393 aaPredicted RBP24.08■■□□□ 1.45
SMG8-203ENST00000578922 PSMA5P28066 241 aa24.08■■□□□ 1.44
SMG8-203ENST00000578922 ZGPATQ8N5A5 531 aaKnown RBP24.08■■□□□ 1.44
SMG8-203ENST00000578922 PANK2Q9BZ23 570 aa24.08■■□□□ 1.44
SMG8-203ENST00000578922 LEMD3Q9Y2U8 911 aa24.08■■□□□ 1.44
SMG8-203ENST00000578922 UFL1O94874 794 aa24.07■■□□□ 1.44
SMG8-203ENST00000578922 SRGNP10124 158 aa24.07■■□□□ 1.44
SMG8-203ENST00000578922 RRAGDQ9NQL2 400 aaPredicted RBP24.07■■□□□ 1.44
SMG8-203ENST00000578922 NRXN2Q9P2S2 1712 aa24.07■■□□□ 1.44
SMG8-203ENST00000578922 DOCK2Q92608 1830 aa24.06■■□□□ 1.44
SMG8-203ENST00000578922 IRS2Q9Y4H2 1338 aa24.06■■□□□ 1.44
SMG8-203ENST00000578922 PPEF1O14829 653 aaPredicted RBP24.06■■□□□ 1.44
SMG8-203ENST00000578922 BLOC1S2Q6QNY1 142 aa24.06■■□□□ 1.44
SMG8-203ENST00000578922 AIDAQ96BJ3 306 aa24.06■■□□□ 1.44
SMG8-203ENST00000578922 PDE6BP35913 854 aa24.06■■□□□ 1.44
SMG8-203ENST00000578922 MBD4O95243 580 aa24.05■■□□□ 1.44
SMG8-203ENST00000578922 APPP05067 770 aa24.05■■□□□ 1.44
SMG8-203ENST00000578922 HAND2P61296 217 aa24.05■■□□□ 1.44
SMG8-203ENST00000578922 TSGA10IPQ3SY00 556 aa24.05■■□□□ 1.44
SMG8-203ENST00000578922 OLFM4Q6UX06 510 aa24.05■■□□□ 1.44
SMG8-203ENST00000578922 STOX1Q6ZVD7 989 aa24.05■■□□□ 1.44
SMG8-203ENST00000578922 BAG4O95429 457 aaKnown RBP24.05■■□□□ 1.44
SMG8-203ENST00000578922 FGAP02671 866 aa24.05■■□□□ 1.44
SMG8-203ENST00000578922 MIGA1Q8NAN2 632 aa24.05■■□□□ 1.44
SMG8-203ENST00000578922 ARMT1Q9H993 441 aa24.05■■□□□ 1.44
SMG8-203ENST00000578922 GGA1Q9UJY5 639 aa24.05■■□□□ 1.44
SMG8-203ENST00000578922 NPR1P16066 1061 aa24.04■■□□□ 1.44
SMG8-203ENST00000578922 KRT32Q14532 448 aa24.04■■□□□ 1.44
SMG8-203ENST00000578922 KLHL40Q2TBA0 621 aa24.04■■□□□ 1.44
SMG8-203ENST00000578922 NEK1Q96PY6 1258 aa24.04■■□□□ 1.44
SMG8-203ENST00000578922 ZNF622Q969S3 477 aaKnown RBP eCLIP24.03■■□□□ 1.44
SMG8-203ENST00000578922 SEMA3EO15041 775 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms