RNA–Protein interactions for RNA: ENST00000578658.1

TRAPPC8-205, Transcript of trafficking protein particle complex 8, humanhuman

TSL 5

Gene TRAPPC8, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-205ENST00000578658 FMR1Q06787 632 aaKnown RBP eCLIP7.49□□□□□ -1.21
TRAPPC8-205ENST00000578658 IKBKEQ14164 716 aa7.49□□□□□ -1.21
TRAPPC8-205ENST00000578658 DOC2BQ14184 412 aa7.49□□□□□ -1.21
TRAPPC8-205ENST00000578658 SUZ12Q15022 739 aaKnown RBP7.49□□□□□ -1.21
TRAPPC8-205ENST00000578658 EPS8L3Q8TE67 593 aaKnown RBP7.49□□□□□ -1.21
TRAPPC8-205ENST00000578658 FOXD4L4Q8WXT5 416 aaPredicted RBP7.49□□□□□ -1.21
TRAPPC8-205ENST00000578658 SSBP4Q9BWG4 385 aaPredicted RBP7.49□□□□□ -1.21
TRAPPC8-205ENST00000578658 EHD4Q9H223 541 aa7.49□□□□□ -1.21
TRAPPC8-205ENST00000578658 AKTIPQ9H8T0 292 aa7.49□□□□□ -1.21
TRAPPC8-205ENST00000578658 TPSG1Q9NRR2 321 aa7.49□□□□□ -1.21
TRAPPC8-205ENST00000578658 A0A096LPE4 126 aa7.48□□□□□ -1.21
TRAPPC8-205ENST00000578658 PNMA6FA0A0J9YX94 578 aa7.48□□□□□ -1.21
TRAPPC8-205ENST00000578658 A0A1W2PPZ6 126 aa7.48□□□□□ -1.21
TRAPPC8-205ENST00000578658 SOX1O00570 391 aaPredicted RBP7.48□□□□□ -1.21
TRAPPC8-205ENST00000578658 ADAM11O75078 769 aa7.48□□□□□ -1.21
TRAPPC8-205ENST00000578658 WISP1O95388 367 aa7.48□□□□□ -1.21
TRAPPC8-205ENST00000578658 ESRRAP11474 423 aaPredicted RBP7.48□□□□□ -1.21
TRAPPC8-205ENST00000578658 IREB2P48200 963 aaKnown RBP7.48□□□□□ -1.21
TRAPPC8-205ENST00000578658 SPRED3Q2MJR0 410 aa7.48□□□□□ -1.21
TRAPPC8-205ENST00000578658 HGSNATQ68CP4 663 aa7.48□□□□□ -1.21
TRAPPC8-205ENST00000578658 PRPF40BQ6NWY9 871 aaKnown RBP7.48□□□□□ -1.21
TRAPPC8-205ENST00000578658 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.48□□□□□ -1.21
TRAPPC8-205ENST00000578658 SLC7A3Q8WY07 619 aa7.48□□□□□ -1.21
TRAPPC8-205ENST00000578658 SOX17Q9H6I2 414 aaPredicted RBP7.48□□□□□ -1.21
TRAPPC8-205ENST00000578658 DDX3YO15523 660 aaKnown RBP7.47□□□□□ -1.21
TRAPPC8-205ENST00000578658 FURINP09958 794 aa7.47□□□□□ -1.21
TRAPPC8-205ENST00000578658 C19orf57Q0VDD7 668 aa7.47□□□□□ -1.21
TRAPPC8-205ENST00000578658 GRM2Q14416 872 aa7.47□□□□□ -1.21
TRAPPC8-205ENST00000578658 Q6ZS46 218 aa7.47□□□□□ -1.21
TRAPPC8-205ENST00000578658 GLIS3Q8NEA6 775 aa7.47□□□□□ -1.21
TRAPPC8-205ENST00000578658 ABCB6Q9NP58 842 aa7.47□□□□□ -1.21
TRAPPC8-205ENST00000578658 GADD45BO75293 160 aaPredicted RBP7.46□□□□□ -1.22
TRAPPC8-205ENST00000578658 ALX3O95076 343 aa7.46□□□□□ -1.22
TRAPPC8-205ENST00000578658 ITPKAP23677 461 aa7.46□□□□□ -1.22
TRAPPC8-205ENST00000578658 ARL4DP49703 201 aa7.46□□□□□ -1.22
TRAPPC8-205ENST00000578658 NKAPLQ5M9Q1 402 aa7.46□□□□□ -1.22
TRAPPC8-205ENST00000578658 PI16Q6UXB8 463 aa7.46□□□□□ -1.22
TRAPPC8-205ENST00000578658 AGGF1Q8N302 714 aaeCLIP7.46□□□□□ -1.22
TRAPPC8-205ENST00000578658 UBASH3BQ8TF42 649 aa7.46□□□□□ -1.22
TRAPPC8-205ENST00000578658 MEGF10Q96KG7 1140 aa7.46□□□□□ -1.22
TRAPPC8-205ENST00000578658 CLEC4MQ9H2X3 399 aaPredicted RBP7.46□□□□□ -1.22
TRAPPC8-205ENST00000578658 TRAK1Q9UPV9 953 aa7.46□□□□□ -1.22
TRAPPC8-205ENST00000578658 MAPK8P45983 427 aa7.45□□□□□ -1.22
TRAPPC8-205ENST00000578658 NLRP12P59046 1061 aa7.45□□□□□ -1.22
TRAPPC8-205ENST00000578658 PCDH1Q08174 1060 aa7.45□□□□□ -1.22
TRAPPC8-205ENST00000578658 DUOXA2Q1HG44 320 aa7.45□□□□□ -1.22
TRAPPC8-205ENST00000578658 RSPO4Q2I0M5 234 aaPredicted RBP7.45□□□□□ -1.22
TRAPPC8-205ENST00000578658 ZNF423Q2M1K9 1284 aa7.45□□□□□ -1.22
TRAPPC8-205ENST00000578658 KIAA1211Q6ZU35 1233 aa7.45□□□□□ -1.22
TRAPPC8-205ENST00000578658 ACAD11Q709F0 780 aa7.45□□□□□ -1.22
TRAPPC8-205ENST00000578658 DZIP1LQ8IYY4 767 aaKnown RBP7.45□□□□□ -1.22
TRAPPC8-205ENST00000578658 ZNF576Q9H609 170 aa7.45□□□□□ -1.22
TRAPPC8-205ENST00000578658 NLRP2Q9NX02 1062 aa7.45□□□□□ -1.22
TRAPPC8-205ENST00000578658 TMEM238LA0A1B0GVL6 79 aa7.44□□□□□ -1.22
TRAPPC8-205ENST00000578658 ADAM23O75077 832 aa7.44□□□□□ -1.22
TRAPPC8-205ENST00000578658 PTPN12Q05209 780 aaKnown RBP7.44□□□□□ -1.22
TRAPPC8-205ENST00000578658 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.44□□□□□ -1.22
TRAPPC8-205ENST00000578658 FBF1Q8TES7 1133 aa7.44□□□□□ -1.22
TRAPPC8-205ENST00000578658 K7ELQ4 463 aaPredicted RBP7.43□□□□□ -1.22
TRAPPC8-205ENST00000578658 B3GALT4O96024 378 aa7.43□□□□□ -1.22
TRAPPC8-205ENST00000578658 P4HBP07237 508 aaKnown RBP7.43□□□□□ -1.22
TRAPPC8-205ENST00000578658 SETDB2Q96T68 719 aa7.43□□□□□ -1.22
TRAPPC8-205ENST00000578658 H2AFB1P0C5Y9 115 aa7.42□□□□□ -1.22
TRAPPC8-205ENST00000578658 H2AFB2P0C5Z0 115 aa7.42□□□□□ -1.22
TRAPPC8-205ENST00000578658 TP53INP1Q96A56 240 aa7.42□□□□□ -1.22
TRAPPC8-205ENST00000578658 BCO2Q9BYV7 579 aa7.42□□□□□ -1.22
TRAPPC8-205ENST00000578658 NRSN2Q9GZP1 204 aa7.42□□□□□ -1.22
TRAPPC8-205ENST00000578658 WWC3Q9ULE0 1092 aa7.42□□□□□ -1.22
TRAPPC8-205ENST00000578658 ANKRD33BA6NCL7 494 aa7.41□□□□□ -1.22
TRAPPC8-205ENST00000578658 EIF4EBP3O60516 100 aaPredicted RBP7.41□□□□□ -1.22
TRAPPC8-205ENST00000578658 GLB1P16278 677 aa7.41□□□□□ -1.22
TRAPPC8-205ENST00000578658 GSTM4Q03013 218 aa7.41□□□□□ -1.22
TRAPPC8-205ENST00000578658 RPS26P11Q5JNZ5 115 aaPredicted RBP7.41□□□□□ -1.22
TRAPPC8-205ENST00000578658 ALG1LQ6GMV1 187 aa7.41□□□□□ -1.22
TRAPPC8-205ENST00000578658 DNAJC14Q6Y2X3 702 aaPredicted RBP7.41□□□□□ -1.22
TRAPPC8-205ENST00000578658 LOC100289279A0A1B0GTE1 492 aa7.4□□□□□ -1.22
TRAPPC8-205ENST00000578658 DYRK3O43781 588 aa7.4□□□□□ -1.22
TRAPPC8-205ENST00000578658 ATP2B2Q01814 1243 aa7.4□□□□□ -1.22
TRAPPC8-205ENST00000578658 COL19A1Q14993 1142 aa7.4□□□□□ -1.22
TRAPPC8-205ENST00000578658 NXPE4Q6UWF7 544 aa7.4□□□□□ -1.22
TRAPPC8-205ENST00000578658 UBL7Q96S82 380 aaPredicted RBP7.4□□□□□ -1.22
TRAPPC8-205ENST00000578658 RUSC1Q9BVN2 902 aa7.4□□□□□ -1.22
TRAPPC8-205ENST00000578658 USP26Q9BXU7 913 aa7.4□□□□□ -1.22
TRAPPC8-205ENST00000578658 CEP41Q9BYV8 373 aa7.4□□□□□ -1.22
TRAPPC8-205ENST00000578658 RNF208Q9H0X6 261 aa7.4□□□□□ -1.22
TRAPPC8-205ENST00000578658 GZF1Q9H116 711 aaPredicted RBP7.4□□□□□ -1.22
TRAPPC8-205ENST00000578658 SEMA6BQ9H3T3 888 aa7.4□□□□□ -1.22
TRAPPC8-205ENST00000578658 MEGF11A6BM72 1044 aa7.39□□□□□ -1.23
TRAPPC8-205ENST00000578658 DLGAP3O95886 979 aa7.39□□□□□ -1.23
TRAPPC8-205ENST00000578658 XRCC5P13010 732 aaKnown RBP7.39□□□□□ -1.23
TRAPPC8-205ENST00000578658 ITGB7P26010 798 aa7.39□□□□□ -1.23
TRAPPC8-205ENST00000578658 FCGRTP55899 365 aa7.39□□□□□ -1.23
TRAPPC8-205ENST00000578658 FAAP100Q0VG06 881 aa7.39□□□□□ -1.23
TRAPPC8-205ENST00000578658 DTHD1Q6ZMT9 781 aa7.39□□□□□ -1.23
TRAPPC8-205ENST00000578658 TRIM56Q9BRZ2 755 aaKnown RBP7.39□□□□□ -1.23
TRAPPC8-205ENST00000578658 PPP4R2Q9NY27 417 aa7.39□□□□□ -1.23
TRAPPC8-205ENST00000578658 LDHBP07195 334 aaKnown RBP7.38□□□□□ -1.23
TRAPPC8-205ENST00000578658 ANKRD34AQ69YU3 496 aa7.38□□□□□ -1.23
TRAPPC8-205ENST00000578658 DDX54Q8TDD1 881 aaKnown RBP7.38□□□□□ -1.23
TRAPPC8-205ENST00000578658 FAM46AQ96IP4 442 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms