RNA–Protein interactions for RNA: ENST00000578348.5

GGA3-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-205ENST00000578348 LDHAL6AQ6ZMR3 332 aa13.44□□□□□ -0.26
GGA3-205ENST00000578348 SEC62Q99442 399 aaKnown RBP13.44□□□□□ -0.26
GGA3-205ENST00000578348 DSCC1Q9BVC3 393 aa13.44□□□□□ -0.26
GGA3-205ENST00000578348 PRDM4Q9UKN5 801 aa13.44□□□□□ -0.26
GGA3-205ENST00000578348 TPM3P06753 285 aa13.44□□□□□ -0.26
GGA3-205ENST00000578348 HSP90B1P14625 803 aaKnown RBP13.44□□□□□ -0.26
GGA3-205ENST00000578348 ADORA1P30542 326 aa13.44□□□□□ -0.26
GGA3-205ENST00000578348 ITPK1Q13572 414 aa13.44□□□□□ -0.26
GGA3-205ENST00000578348 BICD2Q8TD16 824 aa13.44□□□□□ -0.26
GGA3-205ENST00000578348 NEK1Q96PY6 1258 aa13.44□□□□□ -0.26
GGA3-205ENST00000578348 BCORQ6W2J9 1755 aa13.44□□□□□ -0.26
GGA3-205ENST00000578348 FAM177BA6PVY3 158 aa13.43□□□□□ -0.26
GGA3-205ENST00000578348 VPS72Q15906 364 aa13.43□□□□□ -0.26
GGA3-205ENST00000578348 PARP10Q53GL7 1025 aa13.43□□□□□ -0.26
GGA3-205ENST00000578348 GTF3C6Q969F1 213 aa13.43□□□□□ -0.26
GGA3-205ENST00000578348 DDX11Q96FC9 970 aa13.43□□□□□ -0.26
GGA3-205ENST00000578348 CNNM1Q9NRU3 951 aa13.43□□□□□ -0.26
GGA3-205ENST00000578348 ARAP2Q8WZ64 1704 aa13.43□□□□□ -0.26
GGA3-205ENST00000578348 NR1I2O75469 434 aa13.43□□□□□ -0.26
GGA3-205ENST00000578348 CAMTA2O94983 1202 aa13.43□□□□□ -0.26
GGA3-205ENST00000578348 ZFYP08048 801 aaPredicted RBP13.43□□□□□ -0.26
GGA3-205ENST00000578348 PTGS1P23219 599 aa13.43□□□□□ -0.26
GGA3-205ENST00000578348 GTF2F1P35269 517 aaKnown RBP eCLIP13.43□□□□□ -0.26
GGA3-205ENST00000578348 Q6ZUG5 572 aa13.43□□□□□ -0.26
GGA3-205ENST00000578348 CBX8Q9HC52 389 aa13.43□□□□□ -0.26
GGA3-205ENST00000578348 DDX19AQ9NUU7 478 aaKnown RBP13.43□□□□□ -0.26
GGA3-205ENST00000578348 MAST3O60307 1309 aa13.42□□□□□ -0.26
GGA3-205ENST00000578348 H3BQV1 296 aa13.42□□□□□ -0.26
GGA3-205ENST00000578348 IFFO2Q5TF58 517 aa13.42□□□□□ -0.26
GGA3-205ENST00000578348 VGLL2Q8N8G2 317 aa13.42□□□□□ -0.26
GGA3-205ENST00000578348 BRF1Q92994 677 aa13.42□□□□□ -0.26
GGA3-205ENST00000578348 ZNF512BQ96KM6 892 aaPredicted RBP13.42□□□□□ -0.26
GGA3-205ENST00000578348 KIF3AQ9Y496 699 aa13.42□□□□□ -0.26
GGA3-205ENST00000578348 MYH14Q7Z406 1995 aaKnown RBP13.42□□□□□ -0.26
GGA3-205ENST00000578348 BCL9LQ86UU0 1499 aa13.42□□□□□ -0.26
GGA3-205ENST00000578348 DDX60Q8IY21 1712 aaKnown RBP13.42□□□□□ -0.26
GGA3-205ENST00000578348 SUSD4Q5VX71 490 aa13.42□□□□□ -0.26
GGA3-205ENST00000578348 DRC7Q8IY82 874 aa13.42□□□□□ -0.26
GGA3-205ENST00000578348 ZNF710Q8N1W2 664 aa13.42□□□□□ -0.26
GGA3-205ENST00000578348 PGBD1Q96JS3 809 aa13.42□□□□□ -0.26
GGA3-205ENST00000578348 UTP14AQ9BVJ6 771 aaKnown RBP13.42□□□□□ -0.26
GGA3-205ENST00000578348 LRRC2Q9BYS8 371 aa13.42□□□□□ -0.26
GGA3-205ENST00000578348 CLSTN2Q9H4D0 955 aa13.42□□□□□ -0.26
GGA3-205ENST00000578348 MYH7P12883 1935 aa13.41□□□□□ -0.26
GGA3-205ENST00000578348 UBAP1LF5GYI3 381 aa13.41□□□□□ -0.26
GGA3-205ENST00000578348 CYP21A2P08686 494 aa13.41□□□□□ -0.26
GGA3-205ENST00000578348 FGD1P98174 961 aa13.41□□□□□ -0.26
GGA3-205ENST00000578348 FKBP4Q02790 459 aaKnown RBP eCLIP13.41□□□□□ -0.26
GGA3-205ENST00000578348 MROH5Q6ZUA9 1318 aa13.41□□□□□ -0.26
GGA3-205ENST00000578348 CHAF1AQ13111 956 aaPredicted RBP13.41□□□□□ -0.26
GGA3-205ENST00000578348 FAM98CQ17RN3 349 aaKnown RBP13.41□□□□□ -0.26
GGA3-205ENST00000578348 TRIM5Q9C035 493 aa13.41□□□□□ -0.26
GGA3-205ENST00000578348 RTL9Q8NET4 1388 aa13.4□□□□□ -0.26
GGA3-205ENST00000578348 PDE8BO95263 885 aa13.4□□□□□ -0.26
GGA3-205ENST00000578348 HMGB1P09429 215 aaKnown RBP13.4□□□□□ -0.26
GGA3-205ENST00000578348 CEBPZQ03701 1054 aaKnown RBP13.4□□□□□ -0.26
GGA3-205ENST00000578348 RESTQ13127 1097 aa13.4□□□□□ -0.26
GGA3-205ENST00000578348 CCDC186Q7Z3E2 898 aa13.4□□□□□ -0.26
GGA3-205ENST00000578348 DNAJC25Q9H1X3 360 aa13.4□□□□□ -0.26
GGA3-205ENST00000578348 LAMA4Q16363 1823 aa13.39□□□□□ -0.27
GGA3-205ENST00000578348 ZAP70P43403 619 aa13.39□□□□□ -0.27
GGA3-205ENST00000578348 ZNF165P49910 485 aa13.39□□□□□ -0.27
GGA3-205ENST00000578348 FOSBP53539 338 aa13.39□□□□□ -0.27
GGA3-205ENST00000578348 SCRN1Q12765 414 aa13.39□□□□□ -0.27
GGA3-205ENST00000578348 SCARF1Q14162 830 aa13.39□□□□□ -0.27
GGA3-205ENST00000578348 RBM43Q6ZSC3 357 aaKnown RBP13.39□□□□□ -0.27
GGA3-205ENST00000578348 NGLY1Q96IV0 654 aa13.39□□□□□ -0.27
GGA3-205ENST00000578348 C8orf37Q96NL8 207 aa13.39□□□□□ -0.27
GGA3-205ENST00000578348 ZNF652Q9Y2D9 606 aa13.39□□□□□ -0.27
GGA3-205ENST00000578348 AKAP11Q9UKA4 1901 aa13.39□□□□□ -0.27
GGA3-205ENST00000578348 M0R2C6 588 aa13.39□□□□□ -0.27
GGA3-205ENST00000578348 KCNQ2O43526 872 aa13.39□□□□□ -0.27
GGA3-205ENST00000578348 HSPD1P10809 573 aaKnown RBP13.39□□□□□ -0.27
GGA3-205ENST00000578348 LRMPQ12912 555 aa13.39□□□□□ -0.27
GGA3-205ENST00000578348 SLFNL1Q499Z3 407 aa13.39□□□□□ -0.27
GGA3-205ENST00000578348 APPBP2Q92624 585 aa13.39□□□□□ -0.27
GGA3-205ENST00000578348 CCDC94Q9BW85 323 aaPredicted RBP13.39□□□□□ -0.27
GGA3-205ENST00000578348 NRBP1Q9UHY1 535 aa13.39□□□□□ -0.27
GGA3-205ENST00000578348 RIOK3O14730 519 aaKnown RBP13.38□□□□□ -0.27
GGA3-205ENST00000578348 NTSR2O95665 410 aa13.38□□□□□ -0.27
GGA3-205ENST00000578348 UQCRFS1P1P0C7P4 283 aa13.38□□□□□ -0.27
GGA3-205ENST00000578348 PUM3Q15397 648 aaKnown RBP13.38□□□□□ -0.27
GGA3-205ENST00000578348 SMAP1Q8IYB5 467 aaPredicted RBP13.38□□□□□ -0.27
GGA3-205ENST00000578348 OSBP2Q969R2 916 aa13.38□□□□□ -0.27
GGA3-205ENST00000578348 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.38□□□□□ -0.272e-7■■■■□ 24.6
GGA3-205ENST00000578348 BCL2L12Q9HB09 334 aa13.38□□□□□ -0.27
GGA3-205ENST00000578348 THSD7AQ9UPZ6 1657 aa13.38□□□□□ -0.27
GGA3-205ENST00000578348 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.38□□□□□ -0.27
GGA3-205ENST00000578348 RGL2O15211 777 aa13.38□□□□□ -0.27
GGA3-205ENST00000578348 ZNF75DP51815 510 aa13.38□□□□□ -0.27
GGA3-205ENST00000578348 TTF1Q15361 905 aaPredicted RBP13.38□□□□□ -0.27
GGA3-205ENST00000578348 CCDC152Q4G0S7 254 aa13.38□□□□□ -0.27
GGA3-205ENST00000578348 ZSCAN25Q6NSZ9 544 aa13.38□□□□□ -0.27
GGA3-205ENST00000578348 STOX1Q6ZVD7 989 aa13.38□□□□□ -0.27
GGA3-205ENST00000578348 FNBP4Q8N3X1 1017 aaPredicted RBP13.38□□□□□ -0.27
GGA3-205ENST00000578348 TDRD7Q8NHU6 1098 aaKnown RBP13.38□□□□□ -0.27
GGA3-205ENST00000578348 LPIN2Q92539 896 aa13.38□□□□□ -0.27
GGA3-205ENST00000578348 ZSCAN16Q9H4T2 348 aaPredicted RBP13.38□□□□□ -0.27
GGA3-205ENST00000578348 CFAP45Q9UL16 551 aa13.38□□□□□ -0.27
GGA3-205ENST00000578348 NIP7Q9Y221 180 aaKnown RBP eCLIP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms