RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 TOR4AQ9NXH8 423 aa9.03□□□□□ -0.96
SMARCE1-212ENST00000577721 GPRC5DQ9NZD1 345 aa9.03□□□□□ -0.96
SMARCE1-212ENST00000577721 ATP6V0A2Q9Y487 856 aa9.03□□□□□ -0.96
SMARCE1-212ENST00000577721 DICER1Q9UPY3 1922 aaKnown RBP9.03□□□□□ -0.96
SMARCE1-212ENST00000577721 SCN4AP35499 1836 aa9.03□□□□□ -0.96
SMARCE1-212ENST00000577721 UBN2Q6ZU65 1347 aa9.03□□□□□ -0.96
SMARCE1-212ENST00000577721 ACTN4O43707 911 aaKnown RBP9.02□□□□□ -0.97
SMARCE1-212ENST00000577721 NR1I2O75469 434 aa9.02□□□□□ -0.97
SMARCE1-212ENST00000577721 BBOX1O75936 387 aa9.02□□□□□ -0.97
SMARCE1-212ENST00000577721 RAD17O75943 681 aa9.02□□□□□ -0.97
SMARCE1-212ENST00000577721 NTSR2O95665 410 aa9.02□□□□□ -0.97
SMARCE1-212ENST00000577721 TTC13Q8NBP0 860 aa9.02□□□□□ -0.97
SMARCE1-212ENST00000577721 PNNQ9H307 717 aaKnown RBP9.02□□□□□ -0.97
SMARCE1-212ENST00000577721 H7C1D1 291 aa9.01□□□□□ -0.97
SMARCE1-212ENST00000577721 CA12O43570 354 aa9.01□□□□□ -0.97
SMARCE1-212ENST00000577721 CD2BP2O95400 341 aaKnown RBP9.01□□□□□ -0.97
SMARCE1-212ENST00000577721 HCLS1P14317 486 aaPredicted RBP9.01□□□□□ -0.97
SMARCE1-212ENST00000577721 RPIAP49247 311 aa9.01□□□□□ -0.97
SMARCE1-212ENST00000577721 AIMP1Q12904 312 aaKnown RBP9.01□□□□□ -0.97
SMARCE1-212ENST00000577721 SUZ12Q15022 739 aaKnown RBP9.01□□□□□ -0.97
SMARCE1-212ENST00000577721 NFE2L2Q16236 605 aa9.01□□□□□ -0.97
SMARCE1-212ENST00000577721 SLC10A5Q5PT55 438 aa9.01□□□□□ -0.97
SMARCE1-212ENST00000577721 DDX46Q7L014 1031 aaKnown RBP9.01□□□□□ -0.97
SMARCE1-212ENST00000577721 CDC37L1Q7L3B6 337 aa9.01□□□□□ -0.97
SMARCE1-212ENST00000577721 SAPCD2Q86UD0 394 aa9.01□□□□□ -0.97
SMARCE1-212ENST00000577721 USP48Q86UV5 1035 aa9.01□□□□□ -0.97
SMARCE1-212ENST00000577721 SP8Q8IXZ3 490 aa9.01□□□□□ -0.97
SMARCE1-212ENST00000577721 MCOLN1Q9GZU1 580 aa9.01□□□□□ -0.97
SMARCE1-212ENST00000577721 SENP2Q9HC62 589 aa9.01□□□□□ -0.97
SMARCE1-212ENST00000577721 TSPYL4Q9UJ04 414 aa9.01□□□□□ -0.97
SMARCE1-212ENST00000577721 MAPK8IP3Q9UPT6 1336 aa9.01□□□□□ -0.97
SMARCE1-212ENST00000577721 DGKZQ13574 1117 aa9□□□□□ -0.97
SMARCE1-212ENST00000577721 RTFDC1Q9BY42 306 aaPredicted RBP9□□□□□ -0.97
SMARCE1-212ENST00000577721 TRMT112Q9UI30 125 aaKnown RBP9□□□□□ -0.97
SMARCE1-212ENST00000577721 CNOT7Q9UIV1 285 aaKnown RBP9□□□□□ -0.97
SMARCE1-212ENST00000577721 ABCC4O15439 1325 aa9□□□□□ -0.97
SMARCE1-212ENST00000577721 CACNA1SQ13698 1873 aa9□□□□□ -0.97
SMARCE1-212ENST00000577721 PCNTO95613 3336 aa9□□□□□ -0.97
SMARCE1-212ENST00000577721 IBTKQ9P2D0 1353 aaPredicted RBP8.99□□□□□ -0.97
SMARCE1-212ENST00000577721 SIPA1L3O60292 1781 aaPredicted RBP8.99□□□□□ -0.97
SMARCE1-212ENST00000577721 BCORQ6W2J9 1755 aa8.99□□□□□ -0.97
SMARCE1-212ENST00000577721 SNED1Q8TER0 1413 aa8.99□□□□□ -0.97
SMARCE1-212ENST00000577721 ANXA1P04083 346 aa8.99□□□□□ -0.97
SMARCE1-212ENST00000577721 RGS19P49795 217 aa8.99□□□□□ -0.97
SMARCE1-212ENST00000577721 HIRAP54198 1017 aaPredicted RBP8.99□□□□□ -0.97
SMARCE1-212ENST00000577721 BRPF1P55201 1214 aaPredicted RBP8.99□□□□□ -0.97
SMARCE1-212ENST00000577721 KIAA2012Q0VF49 1180 aa8.99□□□□□ -0.97
SMARCE1-212ENST00000577721 HSP90AB3PQ58FF7 597 aa8.99□□□□□ -0.97
SMARCE1-212ENST00000577721 RBM26Q5T8P6 1007 aaKnown RBP8.99□□□□□ -0.97
SMARCE1-212ENST00000577721 LCE2CQ5TA81 110 aa8.99□□□□□ -0.97
SMARCE1-212ENST00000577721 TRPM4Q8TD43 1214 aa8.99□□□□□ -0.97
SMARCE1-212ENST00000577721 ZC3H15Q8WU90 426 aaKnown RBP8.99□□□□□ -0.97
SMARCE1-212ENST00000577721 ZNF428Q96B54 188 aa8.99□□□□□ -0.97
SMARCE1-212ENST00000577721 HHIPL1Q96JK4 782 aa8.99□□□□□ -0.97
SMARCE1-212ENST00000577721 ERBB4Q15303 1308 aa8.99□□□□□ -0.97
SMARCE1-212ENST00000577721 VIRMAQ69YN4 1812 aaKnown RBP8.98□□□□□ -0.97
SMARCE1-212ENST00000577721 COL4A5P29400 1685 aa8.98□□□□□ -0.97
SMARCE1-212ENST00000577721 TTC24A2A3L6 582 aaPredicted RBP8.98□□□□□ -0.97
SMARCE1-212ENST00000577721 SNRPBP14678 240 aaKnown RBP8.98□□□□□ -0.97
SMARCE1-212ENST00000577721 HUNKP57058 714 aa8.98□□□□□ -0.97
SMARCE1-212ENST00000577721 NOGQ13253 232 aa8.98□□□□□ -0.97
SMARCE1-212ENST00000577721 GRAPQ13588 217 aa8.98□□□□□ -0.97
SMARCE1-212ENST00000577721 COPS6Q7L5N1 327 aa8.98□□□□□ -0.97
SMARCE1-212ENST00000577721 NLRP10Q86W26 655 aa8.98□□□□□ -0.97
SMARCE1-212ENST00000577721 C2orf69Q8N8R5 385 aa8.98□□□□□ -0.97
SMARCE1-212ENST00000577721 ZSCAN1Q8NBB4 408 aa8.98□□□□□ -0.97
SMARCE1-212ENST00000577721 GRAPLQ8TC17 118 aaPredicted RBP8.98□□□□□ -0.97
SMARCE1-212ENST00000577721 XAGE3Q8WTP9 111 aa8.98□□□□□ -0.97
SMARCE1-212ENST00000577721 PLEKHF1Q96S99 279 aa8.98□□□□□ -0.97
SMARCE1-212ENST00000577721 ATP13A2Q9NQ11 1180 aa8.98□□□□□ -0.97
SMARCE1-212ENST00000577721 PGAP2Q9UHJ9 254 aa8.98□□□□□ -0.97
SMARCE1-212ENST00000577721 NSFL1CQ9UNZ2 370 aaKnown RBP8.98□□□□□ -0.97
SMARCE1-212ENST00000577721 ARFGEF2Q9Y6D5 1785 aa8.98□□□□□ -0.97
SMARCE1-212ENST00000577721 RIC1Q4ADV7 1423 aa8.97□□□□□ -0.97
SMARCE1-212ENST00000577721 ADAMTSL1Q8N6G6 1762 aa8.97□□□□□ -0.97
SMARCE1-212ENST00000577721 SHTN1A0MZ66 631 aa8.97□□□□□ -0.97
SMARCE1-212ENST00000577721 C6orf229H3BNL8 230 aa8.97□□□□□ -0.97
SMARCE1-212ENST00000577721 RIPK4P57078 832 aa8.97□□□□□ -0.97
SMARCE1-212ENST00000577721 TCIRG1Q13488 830 aa8.97□□□□□ -0.97
SMARCE1-212ENST00000577721 WASHC4Q2M389 1173 aa8.97□□□□□ -0.97
SMARCE1-212ENST00000577721 PROSER3Q2NL68 480 aa8.97□□□□□ -0.97
SMARCE1-212ENST00000577721 TBC1D10BQ4KMP7 808 aaPredicted RBP8.97□□□□□ -0.97
SMARCE1-212ENST00000577721 DLK2Q6UY11 383 aa8.97□□□□□ -0.97
SMARCE1-212ENST00000577721 KRT26Q7Z3Y9 468 aa8.97□□□□□ -0.97
SMARCE1-212ENST00000577721 DCPSQ96C86 337 aaKnown RBP8.97□□□□□ -0.97
SMARCE1-212ENST00000577721 TRIM47Q96LD4 638 aa8.97□□□□□ -0.97
SMARCE1-212ENST00000577721 LAS1LQ9Y4W2 734 aaKnown RBP8.97□□□□□ -0.97
SMARCE1-212ENST00000577721 SH3TC1Q8TE82 1336 aa8.97□□□□□ -0.97
SMARCE1-212ENST00000577721 CDHR2Q9BYE9 1310 aa8.97□□□□□ -0.97
SMARCE1-212ENST00000577721 YDJCA8MPS7 323 aa8.96□□□□□ -0.98
SMARCE1-212ENST00000577721 PSMD14O00487 310 aa8.96□□□□□ -0.98
SMARCE1-212ENST00000577721 CFHP08603 1231 aa8.96□□□□□ -0.98
SMARCE1-212ENST00000577721 OSBPP22059 807 aa8.96□□□□□ -0.98
SMARCE1-212ENST00000577721 RGMBQ6NW40 437 aa8.96□□□□□ -0.98
SMARCE1-212ENST00000577721 TMC4Q7Z404 712 aa8.96□□□□□ -0.98
SMARCE1-212ENST00000577721 CCDC102AQ96A19 550 aa8.96□□□□□ -0.98
SMARCE1-212ENST00000577721 ZIC5Q96T25 663 aa8.96□□□□□ -0.98
SMARCE1-212ENST00000577721 DBNDD1Q9H9R9 158 aa8.96□□□□□ -0.98
SMARCE1-212ENST00000577721 GBA2Q9HCG7 927 aaPredicted RBP8.96□□□□□ -0.98
SMARCE1-212ENST00000577721 LTBP1Q14766 1721 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms