RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 WDR66Q8TBY9 1149 aa19.95■□□□□ 0.78
ERCC4-208ENST00000576348 ZNF277Q9NRM2 450 aaPredicted RBP19.95■□□□□ 0.78
ERCC4-208ENST00000576348 LRP2BPQ9P2M1 347 aa19.95■□□□□ 0.78
ERCC4-208ENST00000576348 KIAA1551Q9HCM1 1747 aa19.94■□□□□ 0.78
ERCC4-208ENST00000576348 A0A1B0GUL6 1792 aa19.94■□□□□ 0.78
ERCC4-208ENST00000576348 CYP2E1P05181 493 aaPredicted RBP19.94■□□□□ 0.78
ERCC4-208ENST00000576348 IL1R1P14778 569 aa19.94■□□□□ 0.78
ERCC4-208ENST00000576348 MAP3K12Q12852 859 aa19.94■□□□□ 0.78
ERCC4-208ENST00000576348 TBC1D9Q6ZT07 1266 aa19.94■□□□□ 0.78
ERCC4-208ENST00000576348 ZGPATQ8N5A5 531 aaKnown RBP19.94■□□□□ 0.78
ERCC4-208ENST00000576348 RUFY2Q8WXA3 655 aa19.94■□□□□ 0.78
ERCC4-208ENST00000576348 VPS33BQ9H267 617 aa19.94■□□□□ 0.78
ERCC4-208ENST00000576348 ANTXR1Q9H6X2 564 aa19.94■□□□□ 0.78
ERCC4-208ENST00000576348 RAI14Q9P0K7 980 aa19.94■□□□□ 0.78
ERCC4-208ENST00000576348 ABCF2Q9UG63 623 aa19.94■□□□□ 0.78
ERCC4-208ENST00000576348 JAG2Q9Y219 1238 aa19.94■□□□□ 0.78
ERCC4-208ENST00000576348 PDS5AQ29RF7 1337 aaKnown RBP19.94■□□□□ 0.78
ERCC4-208ENST00000576348 DUOX1Q9NRD9 1551 aa19.93■□□□□ 0.78
ERCC4-208ENST00000576348 C8orf34Q49A92 452 aa19.93■□□□□ 0.78
ERCC4-208ENST00000576348 SPTY2D1Q68D10 685 aaPredicted RBP19.93■□□□□ 0.78
ERCC4-208ENST00000576348 PODNQ7Z5L7 613 aa19.93■□□□□ 0.78
ERCC4-208ENST00000576348 DBNDD1Q9H9R9 158 aa19.93■□□□□ 0.78
ERCC4-208ENST00000576348 PIH1D3Q9NQM4 214 aaKnown RBP19.93■□□□□ 0.78
ERCC4-208ENST00000576348 CACNA1SQ13698 1873 aa19.92■□□□□ 0.78
ERCC4-208ENST00000576348 ECE2O60344 883 aa19.92■□□□□ 0.78
ERCC4-208ENST00000576348 ZFYP08048 801 aaPredicted RBP19.92■□□□□ 0.78
ERCC4-208ENST00000576348 CHMLP26374 656 aa19.92■□□□□ 0.78
ERCC4-208ENST00000576348 IARSP41252 1262 aaKnown RBP19.92■□□□□ 0.78
ERCC4-208ENST00000576348 ARHGAP27Q6ZUM4 889 aa19.92■□□□□ 0.78
ERCC4-208ENST00000576348 TICAM2Q86XR7 235 aa19.92■□□□□ 0.78
ERCC4-208ENST00000576348 NIM1KQ8IY84 436 aa19.92■□□□□ 0.78
ERCC4-208ENST00000576348 TBC1D22AQ8WUA7 517 aa19.92■□□□□ 0.78
ERCC4-208ENST00000576348 RFX7Q2KHR2 1363 aa19.92■□□□□ 0.78
ERCC4-208ENST00000576348 SNED1Q8TER0 1413 aa19.92■□□□□ 0.78
ERCC4-208ENST00000576348 LTBP1Q14766 1721 aa19.91■□□□□ 0.78
ERCC4-208ENST00000576348 ZBTB22O15209 634 aa19.91■□□□□ 0.78
ERCC4-208ENST00000576348 GTF2IP78347 998 aa19.91■□□□□ 0.78
ERCC4-208ENST00000576348 ERICH6Q7L0X2 663 aa19.91■□□□□ 0.78
ERCC4-208ENST00000576348 JDP2Q8WYK2 163 aa19.91■□□□□ 0.78
ERCC4-208ENST00000576348 RNF113AO15541 343 aaKnown RBP19.9■□□□□ 0.78
ERCC4-208ENST00000576348 CWC27Q6UX04 472 aaKnown RBP19.9■□□□□ 0.78
ERCC4-208ENST00000576348 BACH2Q9BYV9 841 aa19.9■□□□□ 0.78
ERCC4-208ENST00000576348 UPF2Q9HAU5 1272 aaKnown RBP19.9■□□□□ 0.78
ERCC4-208ENST00000576348 LTBP3Q9NS15 1303 aa19.9■□□□□ 0.78
ERCC4-208ENST00000576348 NFKBIEO00221 500 aa19.89■□□□□ 0.77
ERCC4-208ENST00000576348 COL1A1P02452 1464 aaPredicted RBP19.89■□□□□ 0.77
ERCC4-208ENST00000576348 LDHBP07195 334 aaKnown RBP19.89■□□□□ 0.77
ERCC4-208ENST00000576348 NMIQ13287 307 aaPredicted RBP19.89■□□□□ 0.77
ERCC4-208ENST00000576348 SLC9C2Q5TAH2 1124 aa19.89■□□□□ 0.77
ERCC4-208ENST00000576348 DZIP1Q86YF9 867 aaKnown RBP19.89■□□□□ 0.77
ERCC4-208ENST00000576348 FAM205AQ6ZU69 1335 aa19.88■□□□□ 0.77
ERCC4-208ENST00000576348 RASSF7Q02833 373 aa19.88■□□□□ 0.77
ERCC4-208ENST00000576348 MFSD14BQ5SR56 506 aa19.88■□□□□ 0.77
ERCC4-208ENST00000576348 TTLL5Q6EMB2 1281 aa19.88■□□□□ 0.77
ERCC4-208ENST00000576348 KIAA1211Q6ZU35 1233 aa19.88■□□□□ 0.77
ERCC4-208ENST00000576348 ESYT1Q9BSJ8 1104 aa19.88■□□□□ 0.77
ERCC4-208ENST00000576348 SALL1Q9NSC2 1324 aa19.87■□□□□ 0.77
ERCC4-208ENST00000576348 REC8O95072 547 aa19.87■□□□□ 0.77
ERCC4-208ENST00000576348 PDE6AP16499 860 aa19.87■□□□□ 0.77
ERCC4-208ENST00000576348 MFAP1P55081 439 aaKnown RBP19.87■□□□□ 0.77
ERCC4-208ENST00000576348 GPR162Q16538 588 aa19.87■□□□□ 0.77
ERCC4-208ENST00000576348 MAGEB6Q8N7X4 407 aa19.87■□□□□ 0.77
ERCC4-208ENST00000576348 RAD50Q92878 1312 aa19.86■□□□□ 0.77
ERCC4-208ENST00000576348 USP17L3A6NCW0 530 aa19.86■□□□□ 0.77
ERCC4-208ENST00000576348 USP17L4A6NCW7 530 aa19.86■□□□□ 0.77
ERCC4-208ENST00000576348 GSTO1P78417 241 aa19.86■□□□□ 0.77
ERCC4-208ENST00000576348 NAA16Q6N069 864 aaPredicted RBP19.86■□□□□ 0.77
ERCC4-208ENST00000576348 USP17L1Q7RTZ2 530 aa19.86■□□□□ 0.77
ERCC4-208ENST00000576348 FAM227BQ96M60 508 aa19.86■□□□□ 0.77
ERCC4-208ENST00000576348 HELLSQ9NRZ9 838 aa19.86■□□□□ 0.77
ERCC4-208ENST00000576348 ZNRF3Q9ULT6 936 aa19.86■□□□□ 0.77
ERCC4-208ENST00000576348 ZNF532Q9HCE3 1301 aa19.85■□□□□ 0.77
ERCC4-208ENST00000576348 IGSF3O75054 1194 aa19.85■□□□□ 0.77
ERCC4-208ENST00000576348 ADD2P35612 726 aa19.85■□□□□ 0.77
ERCC4-208ENST00000576348 UBE3CQ15386 1083 aa19.85■□□□□ 0.77
ERCC4-208ENST00000576348 STRIP1Q5VSL9 837 aa19.85■□□□□ 0.77
ERCC4-208ENST00000576348 APPBP2Q92624 585 aa19.85■□□□□ 0.77
ERCC4-208ENST00000576348 A0A0D9SFI3 127 aa19.84■□□□□ 0.77
ERCC4-208ENST00000576348 CYP7A1P22680 504 aa19.84■□□□□ 0.77
ERCC4-208ENST00000576348 MCMDC2Q4G0Z9 681 aa19.84■□□□□ 0.77
ERCC4-208ENST00000576348 ZMYM1Q5SVZ6 1142 aa19.84■□□□□ 0.77
ERCC4-208ENST00000576348 TMED8Q6PL24 325 aaPredicted RBP19.84■□□□□ 0.77
ERCC4-208ENST00000576348 SLF2Q8IX21 1173 aa19.84■□□□□ 0.77
ERCC4-208ENST00000576348 NOL10Q9BSC4 688 aaKnown RBP19.84■□□□□ 0.77
ERCC4-208ENST00000576348 ANO2Q9NQ90 1003 aa19.84■□□□□ 0.77
ERCC4-208ENST00000576348 SGSM2O43147 1006 aa19.83■□□□□ 0.77
ERCC4-208ENST00000576348 RAD17O75943 681 aa19.83■□□□□ 0.77
ERCC4-208ENST00000576348 LDHCP07864 332 aa19.83■□□□□ 0.77
ERCC4-208ENST00000576348 YBX3P16989 372 aaKnown RBP eCLIP19.83■□□□□ 0.77
ERCC4-208ENST00000576348 PRDX5P30044 214 aa19.83■□□□□ 0.77
ERCC4-208ENST00000576348 MECOMQ03112 1051 aa19.83■□□□□ 0.77
ERCC4-208ENST00000576348 SUGT1Q9Y2Z0 365 aa19.83■□□□□ 0.77
ERCC4-208ENST00000576348 MAST3O60307 1309 aa19.82■□□□□ 0.76
ERCC4-208ENST00000576348 BRCA1P38398 1863 aaKnown RBP19.82■□□□□ 0.76
ERCC4-208ENST00000576348 LMNB1P20700 586 aa19.82■□□□□ 0.76
ERCC4-208ENST00000576348 AIDAQ96BJ3 306 aa19.82■□□□□ 0.76
ERCC4-208ENST00000576348 YDJCA8MPS7 323 aa19.81■□□□□ 0.76
ERCC4-208ENST00000576348 F8W031 263 aaPredicted RBP19.81■□□□□ 0.76
ERCC4-208ENST00000576348 GRIN3BO60391 1043 aa19.81■□□□□ 0.76
ERCC4-208ENST00000576348 EIF6P56537 245 aaKnown RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms