RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 GUCY1B3Q02153 619 aa10.48□□□□□ -0.73
NCBP3-204ENST00000574911 TAF7LQ5H9L4 462 aa10.48□□□□□ -0.73
NCBP3-204ENST00000574911 PIGBQ92521 554 aa10.48□□□□□ -0.73
NCBP3-204ENST00000574911 CCDC85AQ96PX6 553 aaPredicted RBP10.48□□□□□ -0.73
NCBP3-204ENST00000574911 RTEL1Q9NZ71 1219 aa10.48□□□□□ -0.73
NCBP3-204ENST00000574911 SLAIN2Q9P270 581 aa10.48□□□□□ -0.73
NCBP3-204ENST00000574911 ASAP1Q9ULH1 1129 aa10.48□□□□□ -0.73
NCBP3-204ENST00000574911 RIPOR2Q9Y4F9 1068 aa10.48□□□□□ -0.73
NCBP3-204ENST00000574911 WDR19Q8NEZ3 1342 aa10.47□□□□□ -0.73
NCBP3-204ENST00000574911 PRC1O43663 620 aa10.47□□□□□ -0.73
NCBP3-204ENST00000574911 CDC25BP30305 580 aa10.47□□□□□ -0.73
NCBP3-204ENST00000574911 HSPA2P54652 639 aa10.47□□□□□ -0.73
NCBP3-204ENST00000574911 ANTXR2P58335 489 aa10.47□□□□□ -0.73
NCBP3-204ENST00000574911 HAND2P61296 217 aa10.47□□□□□ -0.73
NCBP3-204ENST00000574911 GLIPR1L2Q4G1C9 344 aa10.47□□□□□ -0.73
NCBP3-204ENST00000574911 GIGYF2Q6Y7W6 1299 aaKnown RBP10.47□□□□□ -0.73
NCBP3-204ENST00000574911 CCDC186Q7Z3E2 898 aa10.47□□□□□ -0.73
NCBP3-204ENST00000574911 ZNF512BQ96KM6 892 aaPredicted RBP10.47□□□□□ -0.73
NCBP3-204ENST00000574911 HPS5Q9UPZ3 1129 aa10.47□□□□□ -0.73
NCBP3-204ENST00000574911 FAM160A1Q05DH4 1040 aa10.47□□□□□ -0.73
NCBP3-204ENST00000574911 STX1AQ16623 288 aa10.47□□□□□ -0.73
NCBP3-204ENST00000574911 ATP2B3Q16720 1220 aa10.47□□□□□ -0.73
NCBP3-204ENST00000574911 SARM1Q6SZW1 724 aa10.47□□□□□ -0.73
NCBP3-204ENST00000574911 CCDC73Q6ZRK6 1079 aa10.47□□□□□ -0.73
NCBP3-204ENST00000574911 C11orf57Q6ZUT1 292 aaPredicted RBP10.47□□□□□ -0.73
NCBP3-204ENST00000574911 NLRP10Q86W26 655 aa10.47□□□□□ -0.73
NCBP3-204ENST00000574911 TRIM5Q9C035 493 aa10.47□□□□□ -0.73
NCBP3-204ENST00000574911 ZNF330Q9Y3S2 320 aaPredicted RBP10.47□□□□□ -0.73
NCBP3-204ENST00000574911 PPFIA3O75145 1194 aa10.46□□□□□ -0.73
NCBP3-204ENST00000574911 STARD3NLO95772 234 aa10.46□□□□□ -0.73
NCBP3-204ENST00000574911 HLFQ16534 295 aa10.46□□□□□ -0.73
NCBP3-204ENST00000574911 NCOA7Q8NI08 942 aa10.46□□□□□ -0.73
NCBP3-204ENST00000574911 ATRNO75882 1429 aa10.46□□□□□ -0.74
NCBP3-204ENST00000574911 KLF18A0A0U1RQI7 1052 aa10.46□□□□□ -0.74
NCBP3-204ENST00000574911 A0A1W2PQ27 194 aa10.46□□□□□ -0.74
NCBP3-204ENST00000574911 A0A1W2PQ64 194 aa10.46□□□□□ -0.74
NCBP3-204ENST00000574911 A0A1W2PQD8 194 aa10.46□□□□□ -0.74
NCBP3-204ENST00000574911 GPAA1O43292 621 aa10.46□□□□□ -0.74
NCBP3-204ENST00000574911 MCAMP43121 646 aa10.46□□□□□ -0.74
NCBP3-204ENST00000574911 HSP90AB3PQ58FF7 597 aa10.46□□□□□ -0.74
NCBP3-204ENST00000574911 METTL24Q5JXM2 366 aa10.46□□□□□ -0.74
NCBP3-204ENST00000574911 PI16Q6UXB8 463 aa10.46□□□□□ -0.74
NCBP3-204ENST00000574911 MTERF4Q7Z6M4 381 aaKnown RBP10.46□□□□□ -0.74
NCBP3-204ENST00000574911 SYNE4Q8N205 404 aa10.46□□□□□ -0.74
NCBP3-204ENST00000574911 FSIP1Q8NA03 581 aa10.46□□□□□ -0.74
NCBP3-204ENST00000574911 TTLL11Q8NHH1 800 aa10.46□□□□□ -0.74
NCBP3-204ENST00000574911 NRBP1Q9UHY1 535 aa10.46□□□□□ -0.74
NCBP3-204ENST00000574911 PCDHA7Q9UN72 937 aa10.46□□□□□ -0.74
NCBP3-204ENST00000574911 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.45□□□□□ -0.74
NCBP3-204ENST00000574911 ZNF213O14771 459 aa10.45□□□□□ -0.74
NCBP3-204ENST00000574911 KINO60870 393 aaKnown RBP10.45□□□□□ -0.74
NCBP3-204ENST00000574911 ITGA6P23229 1130 aa10.45□□□□□ -0.74
NCBP3-204ENST00000574911 ADD2P35612 726 aa10.45□□□□□ -0.74
NCBP3-204ENST00000574911 ME1P48163 572 aa10.45□□□□□ -0.74
NCBP3-204ENST00000574911 ZSCAN25Q6NSZ9 544 aa10.45□□□□□ -0.74
NCBP3-204ENST00000574911 DRC7Q8IY82 874 aa10.45□□□□□ -0.74
NCBP3-204ENST00000574911 VGLL2Q8N8G2 317 aa10.45□□□□□ -0.74
NCBP3-204ENST00000574911 RGS22Q8NE09 1264 aa10.45□□□□□ -0.74
NCBP3-204ENST00000574911 C8orf76Q96K31 380 aa10.45□□□□□ -0.74
NCBP3-204ENST00000574911 GREM2Q9H772 168 aa10.45□□□□□ -0.74
NCBP3-204ENST00000574911 LRP6O75581 1613 aa10.45□□□□□ -0.74
NCBP3-204ENST00000574911 GOLGA8BA8MQT2 603 aa10.45□□□□□ -0.74
NCBP3-204ENST00000574911 DHX16O60231 1041 aaKnown RBP10.45□□□□□ -0.74
NCBP3-204ENST00000574911 KCNA4P22459 653 aa10.45□□□□□ -0.74
NCBP3-204ENST00000574911 CTSWP56202 376 aa10.45□□□□□ -0.74
NCBP3-204ENST00000574911 ADALQ6DHV7 355 aa10.45□□□□□ -0.74
NCBP3-204ENST00000574911 FMR1NBQ8N0W7 255 aaPredicted RBP10.45□□□□□ -0.74
NCBP3-204ENST00000574911 LINC00301Q8NCQ3 95 aa10.45□□□□□ -0.74
NCBP3-204ENST00000574911 FBXO18Q8NFZ0 1043 aa10.45□□□□□ -0.74
NCBP3-204ENST00000574911 MRPS27Q92552 414 aaKnown RBP10.45□□□□□ -0.74
NCBP3-204ENST00000574911 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.45□□□□□ -0.742e-10■■□□□ 11.4
NCBP3-204ENST00000574911 NBPF3Q9H094 633 aa10.45□□□□□ -0.74
NCBP3-204ENST00000574911 C4AP0C0L4 1744 aa10.44□□□□□ -0.74
NCBP3-204ENST00000574911 C4BP0C0L5 1744 aa10.44□□□□□ -0.74
NCBP3-204ENST00000574911 ANKRD18BA2A2Z9 1011 aa10.44□□□□□ -0.74
NCBP3-204ENST00000574911 GOLGA6L19H0YKK7 550 aa10.44□□□□□ -0.74
NCBP3-204ENST00000574911 LRMPQ12912 555 aa10.44□□□□□ -0.74
NCBP3-204ENST00000574911 OTUD7BQ6GQQ9 843 aa10.44□□□□□ -0.74
NCBP3-204ENST00000574911 LDHAL6AQ6ZMR3 332 aa10.44□□□□□ -0.74
NCBP3-204ENST00000574911 DHX40Q8IX18 779 aaKnown RBP10.44□□□□□ -0.74
NCBP3-204ENST00000574911 MRFAP1L1Q96HT8 127 aa10.44□□□□□ -0.74
NCBP3-204ENST00000574911 ANO10Q9NW15 660 aa10.44□□□□□ -0.74
NCBP3-204ENST00000574911 CLIP2Q9UDT6 1046 aa10.44□□□□□ -0.74
NCBP3-204ENST00000574911 MYH7P12883 1935 aa10.44□□□□□ -0.74
NCBP3-204ENST00000574911 GPTP24298 496 aa10.44□□□□□ -0.74
NCBP3-204ENST00000574911 RALYLQ86SE5 291 aaKnown RBP10.44□□□□□ -0.74
NCBP3-204ENST00000574911 POLR3EQ9NVU0 708 aa10.44□□□□□ -0.74
NCBP3-204ENST00000574911 ORC3Q9UBD5 711 aaPredicted RBP10.44□□□□□ -0.74
NCBP3-204ENST00000574911 CLIC4Q9Y696 253 aa10.44□□□□□ -0.74
NCBP3-204ENST00000574911 AKAP11Q9UKA4 1901 aa10.44□□□□□ -0.74
NCBP3-204ENST00000574911 ANKRD36CQ5JPF3 1778 aa10.44□□□□□ -0.74
NCBP3-204ENST00000574911 YEATS4O95619 227 aa10.43□□□□□ -0.74
NCBP3-204ENST00000574911 CYP19A1P11511 503 aaPredicted RBP10.43□□□□□ -0.74
NCBP3-204ENST00000574911 TTF1Q15361 905 aaPredicted RBP10.43□□□□□ -0.74
NCBP3-204ENST00000574911 UBE3CQ15386 1083 aa10.43□□□□□ -0.74
NCBP3-204ENST00000574911 CCDC144BQ3MJ40 725 aa10.43□□□□□ -0.74
NCBP3-204ENST00000574911 BRAPQ7Z569 592 aa10.43□□□□□ -0.74
NCBP3-204ENST00000574911 CCDC144CPQ8IYA2 1237 aa10.43□□□□□ -0.74
NCBP3-204ENST00000574911 KCNG4Q8TDN1 519 aa10.43□□□□□ -0.74
NCBP3-204ENST00000574911 PIH1D3Q9NQM4 214 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms