RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 TMEM63CQ9P1W3 806 aa12.39□□□□□ -0.43
USP43-205ENST00000574408 WWC3Q9ULE0 1092 aa12.39□□□□□ -0.43
USP43-205ENST00000574408 NAP1L2Q9ULW6 460 aaPredicted RBP12.39□□□□□ -0.43
USP43-205ENST00000574408 ZNF532Q9HCE3 1301 aa12.38□□□□□ -0.43
USP43-205ENST00000574408 FIBPO43427 364 aa12.38□□□□□ -0.43
USP43-205ENST00000574408 JAK2O60674 1132 aa12.38□□□□□ -0.43
USP43-205ENST00000574408 PDE6AP16499 860 aa12.38□□□□□ -0.43
USP43-205ENST00000574408 APOBRQ0VD83 1088 aa12.38□□□□□ -0.43
USP43-205ENST00000574408 BCL2L12Q9HB09 334 aa12.38□□□□□ -0.43
USP43-205ENST00000574408 RPS6KA4O75676 772 aa12.38□□□□□ -0.43
USP43-205ENST00000574408 EXOSC10Q01780 885 aaKnown RBP12.38□□□□□ -0.43
USP43-205ENST00000574408 FERMT3Q86UX7 667 aa12.38□□□□□ -0.43
USP43-205ENST00000574408 BCAMP50895 628 aa12.37□□□□□ -0.43
USP43-205ENST00000574408 ZNF445P59923 1031 aa12.37□□□□□ -0.43
USP43-205ENST00000574408 UBE3CQ15386 1083 aa12.37□□□□□ -0.43
USP43-205ENST00000574408 CDC37L1Q7L3B6 337 aa12.37□□□□□ -0.43
USP43-205ENST00000574408 ANP32BQ92688 251 aaKnown RBP12.37□□□□□ -0.43
USP43-205ENST00000574408 GJD4Q96KN9 370 aaPredicted RBP12.37□□□□□ -0.43
USP43-205ENST00000574408 NARFQ9UHQ1 456 aa12.37□□□□□ -0.43
USP43-205ENST00000574408 MYH7P12883 1935 aa12.37□□□□□ -0.43
USP43-205ENST00000574408 DNM1Q05193 864 aaKnown RBP12.37□□□□□ -0.43
USP43-205ENST00000574408 RC3H1Q5TC82 1133 aaKnown RBP12.37□□□□□ -0.43
USP43-205ENST00000574408 ANKRD18AQ8IVF6 992 aa12.37□□□□□ -0.43
USP43-205ENST00000574408 MPNDQ8N594 471 aa12.37□□□□□ -0.43
USP43-205ENST00000574408 BCORQ6W2J9 1755 aa12.37□□□□□ -0.43
USP43-205ENST00000574408 ZPR1O75312 459 aa12.37□□□□□ -0.43
USP43-205ENST00000574408 APPP05067 770 aa12.37□□□□□ -0.43
USP43-205ENST00000574408 RBM10P98175 930 aaKnown RBP12.37□□□□□ -0.43
USP43-205ENST00000574408 SCRN1Q12765 414 aa12.37□□□□□ -0.43
USP43-205ENST00000574408 DDX11Q96FC9 970 aa12.37□□□□□ -0.43
USP43-205ENST00000574408 AFF2P51816 1311 aa12.37□□□□□ -0.43
USP43-205ENST00000574408 BTAF1O14981 1849 aa12.36□□□□□ -0.43
USP43-205ENST00000574408 ZNF831Q5JPB2 1677 aa12.36□□□□□ -0.43
USP43-205ENST00000574408 FAM43AQ8N2R8 423 aa12.36□□□□□ -0.43
USP43-205ENST00000574408 TMEM87AQ8NBN3 555 aa12.36□□□□□ -0.43
USP43-205ENST00000574408 RTCBQ9Y3I0 505 aaKnown RBP12.36□□□□□ -0.43
USP43-205ENST00000574408 LAMA4Q16363 1823 aa12.36□□□□□ -0.43
USP43-205ENST00000574408 ZNF213O14771 459 aa12.36□□□□□ -0.43
USP43-205ENST00000574408 PFKFB2O60825 505 aa12.36□□□□□ -0.43
USP43-205ENST00000574408 HSPA1LP34931 641 aa12.36□□□□□ -0.43
USP43-205ENST00000574408 MAP3K12Q12852 859 aa12.36□□□□□ -0.43
USP43-205ENST00000574408 SF3B3Q15393 1217 aaKnown RBP12.36□□□□□ -0.43
USP43-205ENST00000574408 SETDB2Q96T68 719 aa12.36□□□□□ -0.43
USP43-205ENST00000574408 MYO5AQ9Y4I1 1855 aaKnown RBP12.36□□□□□ -0.43
USP43-205ENST00000574408 CCT2P78371 535 aaKnown RBP12.36□□□□□ -0.43
USP43-205ENST00000574408 NBPF5PQ86XG9 351 aaPredicted RBP12.36□□□□□ -0.43
USP43-205ENST00000574408 MAGEB6Q8N7X4 407 aa12.36□□□□□ -0.43
USP43-205ENST00000574408 AIDAQ96BJ3 306 aa12.36□□□□□ -0.43
USP43-205ENST00000574408 IQSEC3Q9UPP2 1182 aaPredicted RBP12.36□□□□□ -0.43
USP43-205ENST00000574408 THSD7AQ9UPZ6 1657 aa12.35□□□□□ -0.43
USP43-205ENST00000574408 SYCE3A1L190 88 aa12.35□□□□□ -0.43
USP43-205ENST00000574408 PDIA4P13667 645 aaKnown RBP12.35□□□□□ -0.43
USP43-205ENST00000574408 RALYLQ86SE5 291 aaKnown RBP12.35□□□□□ -0.43
USP43-205ENST00000574408 CCDC24Q8N4L8 307 aa12.35□□□□□ -0.43
USP43-205ENST00000574408 AGXT2Q9BYV1 514 aa12.35□□□□□ -0.43
USP43-205ENST00000574408 LAMB2P55268 1798 aa12.35□□□□□ -0.43
USP43-205ENST00000574408 COL4A1P02462 1669 aa12.35□□□□□ -0.43
USP43-205ENST00000574408 TCRBV5S4A2TA0A5A2 114 aa12.35□□□□□ -0.43
USP43-205ENST00000574408 AMIGO3Q86WK7 504 aa12.35□□□□□ -0.43
USP43-205ENST00000574408 CERKQ8TCT0 537 aa12.35□□□□□ -0.43
USP43-205ENST00000574408 GPHNQ9NQX3 736 aaPredicted RBP12.35□□□□□ -0.43
USP43-205ENST00000574408 ATRNO75882 1429 aa12.35□□□□□ -0.43
USP43-205ENST00000574408 FAM173BQ6P4H8 233 aa12.34□□□□□ -0.43
USP43-205ENST00000574408 FAM184AQ8NB25 1140 aa12.34□□□□□ -0.43
USP43-205ENST00000574408 ARAP2Q8WZ64 1704 aa12.34□□□□□ -0.43
USP43-205ENST00000574408 CELF1Q92879 486 aaKnown RBP12.34□□□□□ -0.43
USP43-205ENST00000574408 SYAP1Q96A49 352 aaPredicted RBP12.34□□□□□ -0.43
USP43-205ENST00000574408 NYXQ9GZU5 481 aa12.34□□□□□ -0.43
USP43-205ENST00000574408 NCOA5Q9HCD5 579 aaKnown RBP12.34□□□□□ -0.43
USP43-205ENST00000574408 RGL2O15211 777 aa12.34□□□□□ -0.43
USP43-205ENST00000574408 PRC1O43663 620 aa12.34□□□□□ -0.43
USP43-205ENST00000574408 PHF14O94880 888 aa12.34□□□□□ -0.43
USP43-205ENST00000574408 NCOA7Q8NI08 942 aa12.34□□□□□ -0.43
USP43-205ENST00000574408 NHSQ6T4R5 1651 aa12.33□□□□□ -0.43
USP43-205ENST00000574408 WTIPA6NIX2 430 aaPredicted RBP12.33□□□□□ -0.44
USP43-205ENST00000574408 MBD4O95243 580 aa12.33□□□□□ -0.44
USP43-205ENST00000574408 MCM5P33992 734 aa12.33□□□□□ -0.44
USP43-205ENST00000574408 CSPP1Q1MSJ5 1256 aa12.33□□□□□ -0.44
USP43-205ENST00000574408 SLC10A5Q5PT55 438 aa12.33□□□□□ -0.44
USP43-205ENST00000574408 MB21D2Q8IYB1 491 aaPredicted RBP12.33□□□□□ -0.44
USP43-205ENST00000574408 SEPT12Q8IYM1 358 aa12.33□□□□□ -0.44
USP43-205ENST00000574408 NSUN7Q8NE18 718 aaKnown RBP12.33□□□□□ -0.44
USP43-205ENST00000574408 ARHGEF1Q92888 912 aaKnown RBP12.33□□□□□ -0.44
USP43-205ENST00000574408 STRBPQ96SI9 672 aaKnown RBP12.33□□□□□ -0.44
USP43-205ENST00000574408 BSDC1Q9NW68 430 aaPredicted RBP12.33□□□□□ -0.44
USP43-205ENST00000574408 H3BQV1 296 aa12.33□□□□□ -0.44
USP43-205ENST00000574408 PPFIA3O75145 1194 aa12.33□□□□□ -0.44
USP43-205ENST00000574408 PDIA3P30101 505 aaKnown RBP12.33□□□□□ -0.44
USP43-205ENST00000574408 GYG1P46976 350 aa12.33□□□□□ -0.44
USP43-205ENST00000574408 NASPP49321 788 aaPredicted RBP12.33□□□□□ -0.44
USP43-205ENST00000574408 FOSBP53539 338 aa12.33□□□□□ -0.44
USP43-205ENST00000574408 UBE2HP62256 183 aa12.33□□□□□ -0.44
USP43-205ENST00000574408 IFFO2Q5TF58 517 aa12.33□□□□□ -0.44
USP43-205ENST00000574408 NLRP3Q96P20 1036 aa12.33□□□□□ -0.44
USP43-205ENST00000574408 LLPHQ9BRT6 129 aaKnown RBP12.33□□□□□ -0.44
USP43-205ENST00000574408 ZMYND15Q9H091 742 aa12.33□□□□□ -0.44
USP43-205ENST00000574408 LRP2BPQ9P2M1 347 aa12.33□□□□□ -0.44
USP43-205ENST00000574408 SCN7AQ01118 1682 aa12.33□□□□□ -0.44
USP43-205ENST00000574408 PTPDC1A2A3K4 754 aa12.33□□□□□ -0.44
USP43-205ENST00000574408 NPHP1O15259 732 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms