RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 MEIOBQ8N635 442 aa2.87□□□□□ -1.95
CHD3-217ENST00000574022 PRPF38AQ8NAV1 312 aaKnown RBP2.87□□□□□ -1.95
CHD3-217ENST00000574022 OR6P1Q8NGX9 317 aa2.87□□□□□ -1.95
CHD3-217ENST00000574022 THAP3Q8WTV1 239 aaPredicted RBP2.87□□□□□ -1.95
CHD3-217ENST00000574022 JARID2Q92833 1246 aaPredicted RBP2.87□□□□□ -1.95
CHD3-217ENST00000574022 NECAB3Q96P71 396 aaPredicted RBP2.87□□□□□ -1.95
CHD3-217ENST00000574022 CEP89Q96ST8 783 aa2.87□□□□□ -1.95
CHD3-217ENST00000574022 OSMRQ99650 979 aa2.87□□□□□ -1.95
CHD3-217ENST00000574022 FEZ1Q99689 392 aa2.87□□□□□ -1.95
CHD3-217ENST00000574022 ZCCHC2Q9C0B9 1178 aaKnown RBP2.87□□□□□ -1.95
CHD3-217ENST00000574022 MYH16Q9H6N6 1097 aa2.87□□□□□ -1.95
CHD3-217ENST00000574022 BRD7Q9NPI1 651 aa2.87□□□□□ -1.95
CHD3-217ENST00000574022 SEC31BQ9NQW1 1179 aa2.87□□□□□ -1.95
CHD3-217ENST00000574022 TYW1Q9NV66 732 aaKnown RBP2.87□□□□□ -1.95
CHD3-217ENST00000574022 DZANK1Q9NVP4 752 aa2.87□□□□□ -1.95
CHD3-217ENST00000574022 KCNH4Q9UQ05 1017 aa2.87□□□□□ -1.95
CHD3-217ENST00000574022 MAPK8IP1Q9UQF2 711 aa2.87□□□□□ -1.95
CHD3-217ENST00000574022 LEMD3Q9Y2U8 911 aa2.87□□□□□ -1.95
CHD3-217ENST00000574022 TTC24A2A3L6 582 aaPredicted RBP2.86□□□□□ -1.95
CHD3-217ENST00000574022 J3QL48 77 aa2.86□□□□□ -1.95
CHD3-217ENST00000574022 ENC1O14682 589 aa2.86□□□□□ -1.95
CHD3-217ENST00000574022 DDAH1O94760 285 aa2.86□□□□□ -1.95
CHD3-217ENST00000574022 PSAPP07602 524 aa2.86□□□□□ -1.95
CHD3-217ENST00000574022 RARAP10276 462 aa2.86□□□□□ -1.95
CHD3-217ENST00000574022 IMPDH2P12268 514 aa2.86□□□□□ -1.95
CHD3-217ENST00000574022 HCLS1P14317 486 aaPredicted RBP2.86□□□□□ -1.95
CHD3-217ENST00000574022 GRIA4P48058 902 aa2.86□□□□□ -1.95
CHD3-217ENST00000574022 HYAL2Q12891 473 aa2.86□□□□□ -1.95
CHD3-217ENST00000574022 CCINQ13939 588 aa2.86□□□□□ -1.95
CHD3-217ENST00000574022 TCEA2Q15560 299 aa2.86□□□□□ -1.95
CHD3-217ENST00000574022 PPP2R5EQ16537 467 aa2.86□□□□□ -1.95
CHD3-217ENST00000574022 SPRED3Q2MJR0 410 aa2.86□□□□□ -1.95
CHD3-217ENST00000574022 TKFCQ3LXA3 575 aa2.86□□□□□ -1.95
CHD3-217ENST00000574022 C2orf27AQ580R0 203 aa2.86□□□□□ -1.95
CHD3-217ENST00000574022 GORABQ5T7V8 394 aa2.86□□□□□ -1.95
CHD3-217ENST00000574022 LCE2DQ5TA82 110 aaPredicted RBP2.86□□□□□ -1.95
CHD3-217ENST00000574022 SPRYD7Q5W111 196 aa2.86□□□□□ -1.95
CHD3-217ENST00000574022 BNC2Q6ZN30 1099 aaPredicted RBP2.86□□□□□ -1.95
CHD3-217ENST00000574022 GK5Q6ZS86 529 aa2.86□□□□□ -1.95
CHD3-217ENST00000574022 FMNL3Q8IVF7 1028 aa2.86□□□□□ -1.95
CHD3-217ENST00000574022 REXO1Q8N1G1 1221 aaKnown RBP2.86□□□□□ -1.95
CHD3-217ENST00000574022 PGBD3Q8N328 593 aa2.86□□□□□ -1.95
CHD3-217ENST00000574022 FBXO27Q8NI29 283 aa2.86□□□□□ -1.95
CHD3-217ENST00000574022 GATAD2BQ8WXI9 593 aa2.86□□□□□ -1.95
CHD3-217ENST00000574022 JDP2Q8WYK2 163 aa2.86□□□□□ -1.95
CHD3-217ENST00000574022 CCDC136Q96JN2 1154 aa2.86□□□□□ -1.95
CHD3-217ENST00000574022 ZKSCAN3Q9BRR0 538 aa2.86□□□□□ -1.95
CHD3-217ENST00000574022 IER2Q9BTL4 223 aa2.86□□□□□ -1.95
CHD3-217ENST00000574022 LRRC3Q9BY71 257 aa2.86□□□□□ -1.95
CHD3-217ENST00000574022 GSX2Q9BZM3 304 aa2.86□□□□□ -1.95
CHD3-217ENST00000574022 MIR1-1HGQ9H1L0 117 aa2.86□□□□□ -1.95
CHD3-217ENST00000574022 TNKS2Q9H2K2 1166 aa2.86□□□□□ -1.95
CHD3-217ENST00000574022 MAGEC2Q9UBF1 373 aaPredicted RBP2.86□□□□□ -1.95
CHD3-217ENST00000574022 HCSTQ9UBK5 93 aa2.86□□□□□ -1.95
CHD3-217ENST00000574022 SAMM50Q9Y512 469 aa2.86□□□□□ -1.95
CHD3-217ENST00000574022 KDM2BQ8NHM5 1336 aa2.86□□□□□ -1.95
CHD3-217ENST00000574022 A0A096LPE4 126 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 CCDC194A0A1B0GVG4 234 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 A0A1W2PPZ6 126 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 FAM221AA4D161 298 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 PEX14O75381 377 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 PAGE1O75459 146 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 TRPA1O75762 1119 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 GJB6O95452 261 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 ASMTLO95671 621 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 BPNT1O95861 308 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 VIL1P09327 827 aaKnown RBP2.85□□□□□ -1.95
CHD3-217ENST00000574022 RHOQP17081 205 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 ITPKAP23677 461 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 CNGA1P29973 690 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 CASP7P55210 303 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 KCNQ4P56696 695 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 CLCQ05315 142 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 PPP2R3AQ06190 1150 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 SSRP1Q08945 709 aaKnown RBP2.85□□□□□ -1.95
CHD3-217ENST00000574022 MPP2Q14168 576 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 RPS26P11Q5JNZ5 115 aaPredicted RBP2.85□□□□□ -1.95
CHD3-217ENST00000574022 ODR4Q5SWX8 454 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 ZNF697Q5TEC3 545 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 SAMD5Q5TGI4 173 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 KRT26Q7Z3Y9 468 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 ZNF598Q86UK7 904 aaKnown RBP2.85□□□□□ -1.95
CHD3-217ENST00000574022 NLRP8Q86W28 1048 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 CCAR1Q8IX12 1150 aaKnown RBP2.85□□□□□ -1.95
CHD3-217ENST00000574022 CYP4X1Q8N118 509 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 LINC00528Q8N1L1 170 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 SYNPOQ8N3V7 929 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 CEP120Q8N960 986 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 JMYQ8N9B5 988 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 RBBP8NLQ8NC74 664 aaPredicted RBP2.85□□□□□ -1.95
CHD3-217ENST00000574022 RNF217Q8TC41 542 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 PLD4Q96BZ4 506 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 CNTNAP3BQ96NU0 1288 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 PNMA5Q96PV4 448 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 CNTNAP3Q9BZ76 1288 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 RBSNQ9H1K0 784 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 CRISPLD1Q9H336 500 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 RUBCNLQ9H714 662 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 BRMS1Q9HCU9 246 aa2.85□□□□□ -1.95
CHD3-217ENST00000574022 HOMER2Q9NSB8 354 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms