RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 TAF6LQ9Y6J9 622 aa24.56■■□□□ 1.52
CHRNE-202ENST00000572438 TCRBV5S4A2TA0A5A2 114 aa24.55■■□□□ 1.52
CHRNE-202ENST00000572438 CPA1P15085 419 aa24.55■■□□□ 1.52
CHRNE-202ENST00000572438 KLRK1P26718 216 aa24.55■■□□□ 1.52
CHRNE-202ENST00000572438 SLC15A2Q16348 729 aa24.55■■□□□ 1.52
CHRNE-202ENST00000572438 ANO8Q9HCE9 1232 aaPredicted RBP24.55■■□□□ 1.52
CHRNE-202ENST00000572438 IQSEC3Q9UPP2 1182 aaPredicted RBP24.55■■□□□ 1.52
CHRNE-202ENST00000572438 NRXN2Q9P2S2 1712 aa24.54■■□□□ 1.52
CHRNE-202ENST00000572438 SEMA3EO15041 775 aa24.54■■□□□ 1.52
CHRNE-202ENST00000572438 GPAA1O43292 621 aa24.54■■□□□ 1.52
CHRNE-202ENST00000572438 CYP21A2P08686 494 aa24.54■■□□□ 1.52
CHRNE-202ENST00000572438 MMP10P09238 476 aa24.54■■□□□ 1.52
CHRNE-202ENST00000572438 CRAMP1Q96RY5 1269 aa24.54■■□□□ 1.52
CHRNE-202ENST00000572438 PDRG1Q9NUG6 133 aa24.54■■□□□ 1.52
CHRNE-202ENST00000572438 ANKIB1Q9P2G1 1089 aa24.54■■□□□ 1.52
CHRNE-202ENST00000572438 DENND2AQ9ULE3 1009 aa24.54■■□□□ 1.52
CHRNE-202ENST00000572438 LEMD3Q9Y2U8 911 aa24.54■■□□□ 1.52
CHRNE-202ENST00000572438 XDHP47989 1333 aa24.54■■□□□ 1.52
CHRNE-202ENST00000572438 BBOX1O75936 387 aa24.54■■□□□ 1.52
CHRNE-202ENST00000572438 AK2P54819 239 aa24.54■■□□□ 1.52
CHRNE-202ENST00000572438 SF3B2Q13435 895 aaKnown RBP24.54■■□□□ 1.52
CHRNE-202ENST00000572438 NBR1Q14596 966 aa24.54■■□□□ 1.52
CHRNE-202ENST00000572438 NOL8Q76FK4 1167 aaKnown RBP24.54■■□□□ 1.52
CHRNE-202ENST00000572438 UPF1Q92900 1129 aaKnown RBP eCLIP24.54■■□□□ 1.52
CHRNE-202ENST00000572438 STK32BQ9NY57 414 aa24.54■■□□□ 1.52
CHRNE-202ENST00000572438 PARP3Q9Y6F1 533 aa24.54■■□□□ 1.52
CHRNE-202ENST00000572438 DOCK2Q92608 1830 aa24.53■■□□□ 1.52
CHRNE-202ENST00000572438 HIBADHP31937 336 aaKnown RBP24.53■■□□□ 1.52
CHRNE-202ENST00000572438 CUL4AQ13619 759 aa24.53■■□□□ 1.52
CHRNE-202ENST00000572438 COL1A1P02452 1464 aaPredicted RBP24.52■■□□□ 1.52
CHRNE-202ENST00000572438 IRS2Q9Y4H2 1338 aa24.52■■□□□ 1.52
CHRNE-202ENST00000572438 BLOC1S2Q6QNY1 142 aa24.52■■□□□ 1.52
CHRNE-202ENST00000572438 DEFB132Q7Z7B7 95 aa24.52■■□□□ 1.52
CHRNE-202ENST00000572438 MAGEB6Q8N7X4 407 aa24.52■■□□□ 1.52
CHRNE-202ENST00000572438 FOXP2O15409 715 aa24.51■■□□□ 1.51
CHRNE-202ENST00000572438 CWC22Q9HCG8 908 aaKnown RBP24.51■■□□□ 1.51
CHRNE-202ENST00000572438 LRP2BPQ9P2M1 347 aa24.51■■□□□ 1.51
CHRNE-202ENST00000572438 CTNNA3Q9UI47 895 aa24.51■■□□□ 1.51
CHRNE-202ENST00000572438 PDS5AQ29RF7 1337 aaKnown RBP24.51■■□□□ 1.51
CHRNE-202ENST00000572438 ZBTB22O15209 634 aa24.51■■□□□ 1.51
CHRNE-202ENST00000572438 NFKBIBQ15653 356 aa24.51■■□□□ 1.51
CHRNE-202ENST00000572438 RPS6KB1P23443 525 aa24.5■■□□□ 1.51
CHRNE-202ENST00000572438 MSL1Q68DK7 614 aa24.5■■□□□ 1.51
CHRNE-202ENST00000572438 SLC51AQ86UW1 340 aa24.5■■□□□ 1.51
CHRNE-202ENST00000572438 LIMCH1Q9UPQ0 1083 aa24.5■■□□□ 1.51
CHRNE-202ENST00000572438 MYO5AQ9Y4I1 1855 aaKnown RBP24.5■■□□□ 1.51
CHRNE-202ENST00000572438 BAG6P46379 1132 aa24.49■■□□□ 1.51
CHRNE-202ENST00000572438 NEK1Q96PY6 1258 aa24.49■■□□□ 1.51
CHRNE-202ENST00000572438 GPSM2P81274 684 aa24.49■■□□□ 1.51
CHRNE-202ENST00000572438 TMC4Q7Z404 712 aa24.49■■□□□ 1.51
CHRNE-202ENST00000572438 TXNRD3Q86VQ6 643 aa24.49■■□□□ 1.51
CHRNE-202ENST00000572438 CCDC125Q86Z20 511 aa24.49■■□□□ 1.51
CHRNE-202ENST00000572438 AIDAQ96BJ3 306 aa24.49■■□□□ 1.51
CHRNE-202ENST00000572438 INTS4Q96HW7 963 aaKnown RBP24.49■■□□□ 1.51
CHRNE-202ENST00000572438 ALDH8A1Q9H2A2 487 aaPredicted RBP24.49■■□□□ 1.51
CHRNE-202ENST00000572438 ANKRD31Q8N7Z5 1873 aa24.48■■□□□ 1.51
CHRNE-202ENST00000572438 FRAT2O75474 233 aaPredicted RBP24.48■■□□□ 1.51
CHRNE-202ENST00000572438 C15orf52Q6ZUT6 534 aaKnown RBP24.48■■□□□ 1.51
CHRNE-202ENST00000572438 ZGPATQ8N5A5 531 aaKnown RBP24.48■■□□□ 1.51
CHRNE-202ENST00000572438 SRGNP10124 158 aa24.47■■□□□ 1.51
CHRNE-202ENST00000572438 PDE6BP35913 854 aa24.47■■□□□ 1.51
CHRNE-202ENST00000572438 COL9A3Q14050 684 aaPredicted RBP24.47■■□□□ 1.51
CHRNE-202ENST00000572438 STRBPQ96SI9 672 aaKnown RBP24.47■■□□□ 1.51
CHRNE-202ENST00000572438 ABCF2Q9UG63 623 aa24.47■■□□□ 1.51
CHRNE-202ENST00000572438 FGAP02671 866 aa24.47■■□□□ 1.51
CHRNE-202ENST00000572438 NPR1P16066 1061 aa24.47■■□□□ 1.51
CHRNE-202ENST00000572438 ATP2B4P23634 1241 aa24.47■■□□□ 1.51
CHRNE-202ENST00000572438 TTLL5Q6EMB2 1281 aa24.47■■□□□ 1.51
CHRNE-202ENST00000572438 STOX1Q6ZVD7 989 aa24.47■■□□□ 1.51
CHRNE-202ENST00000572438 NSFL1CQ9UNZ2 370 aaKnown RBP24.47■■□□□ 1.51
CHRNE-202ENST00000572438 HMGB1P09429 215 aaKnown RBP24.46■■□□□ 1.51
CHRNE-202ENST00000572438 IMMTQ16891 758 aaKnown RBP24.46■■□□□ 1.51
CHRNE-202ENST00000572438 PODXL2Q9NZ53 605 aa24.46■■□□□ 1.51
CHRNE-202ENST00000572438 RAI14Q9P0K7 980 aa24.46■■□□□ 1.51
CHRNE-202ENST00000572438 ANKRD1Q15327 319 aa24.45■■□□□ 1.5
CHRNE-202ENST00000572438 ZSCAN31Q96LW9 406 aaPredicted RBP24.45■■□□□ 1.5
CHRNE-202ENST00000572438 GGA1Q9UJY5 639 aa24.45■■□□□ 1.5
CHRNE-202ENST00000572438 QSER1Q2KHR3 1735 aa24.45■■□□□ 1.5
CHRNE-202ENST00000572438 A0A0G2JLW4 131 aa24.45■■□□□ 1.5
CHRNE-202ENST00000572438 PPEF1O14829 653 aaPredicted RBP24.45■■□□□ 1.5
CHRNE-202ENST00000572438 MBD4O95243 580 aa24.45■■□□□ 1.5
CHRNE-202ENST00000572438 RAB3GAP1Q15042 981 aa24.45■■□□□ 1.5
CHRNE-202ENST00000572438 E7EWF7 191 aa24.44■■□□□ 1.5
CHRNE-202ENST00000572438 UFL1O94874 794 aa24.44■■□□□ 1.5
CHRNE-202ENST00000572438 ZNF804AQ7Z570 1209 aa24.44■■□□□ 1.5
CHRNE-202ENST00000572438 SP8Q8IXZ3 490 aa24.44■■□□□ 1.5
CHRNE-202ENST00000572438 LARP6Q9BRS8 491 aaKnown RBP24.44■■□□□ 1.5
CHRNE-202ENST00000572438 CYP7A1P22680 504 aa24.43■■□□□ 1.5
CHRNE-202ENST00000572438 SH2B1Q9NRF2 756 aaPredicted RBP24.43■■□□□ 1.5
CHRNE-202ENST00000572438 TCEANC2Q96MN5 208 aa24.42■■□□□ 1.5
CHRNE-202ENST00000572438 ARMT1Q9H993 441 aa24.42■■□□□ 1.5
CHRNE-202ENST00000572438 ATP6V0A2Q9Y487 856 aa24.42■■□□□ 1.5
CHRNE-202ENST00000572438 APPP05067 770 aa24.42■■□□□ 1.5
CHRNE-202ENST00000572438 ALDH1B1P30837 517 aa24.42■■□□□ 1.5
CHRNE-202ENST00000572438 CHAF1AQ13111 956 aaPredicted RBP24.42■■□□□ 1.5
CHRNE-202ENST00000572438 ALX1Q15699 326 aa24.42■■□□□ 1.5
CHRNE-202ENST00000572438 MASTLQ96GX5 879 aa24.42■■□□□ 1.5
CHRNE-202ENST00000572438 LRRC37AA6NMS7 1700 aa24.41■■□□□ 1.5
CHRNE-202ENST00000572438 PATL2C9JE40 543 aaKnown RBP24.41■■□□□ 1.5
CHRNE-202ENST00000572438 GNAT2P19087 354 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms