RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 ARID4AP29374 1257 aaPredicted RBP11.52□□□□□ -0.57
NPLOC4-208ENST00000572351 RASGRF1Q13972 1273 aa11.52□□□□□ -0.57
NPLOC4-208ENST00000572351 TNIP1Q15025 636 aa11.52□□□□□ -0.57
NPLOC4-208ENST00000572351 TTLL5Q6EMB2 1281 aa11.52□□□□□ -0.57
NPLOC4-208ENST00000572351 CIAPIN1Q6FI81 312 aa11.52□□□□□ -0.57
NPLOC4-208ENST00000572351 USP17L1Q7RTZ2 530 aa11.52□□□□□ -0.57
NPLOC4-208ENST00000572351 SPATA5Q8NB90 893 aa11.52□□□□□ -0.57
NPLOC4-208ENST00000572351 DNAJC2Q99543 621 aaKnown RBP11.52□□□□□ -0.57
NPLOC4-208ENST00000572351 GJA3Q9Y6H8 435 aa11.52□□□□□ -0.57
NPLOC4-208ENST00000572351 TTC41PQ6P2S7 1318 aa11.52□□□□□ -0.57
NPLOC4-208ENST00000572351 GLRX3O76003 335 aaKnown RBP11.51□□□□□ -0.57
NPLOC4-208ENST00000572351 ATP5JP18859 108 aa11.51□□□□□ -0.57
NPLOC4-208ENST00000572351 CXCL9Q07325 125 aa11.51□□□□□ -0.57
NPLOC4-208ENST00000572351 STRIP1Q5VSL9 837 aa11.51□□□□□ -0.57
NPLOC4-208ENST00000572351 DPY19L2Q6NUT2 758 aa11.51□□□□□ -0.57
NPLOC4-208ENST00000572351 WDR66Q8TBY9 1149 aa11.51□□□□□ -0.57
NPLOC4-208ENST00000572351 TBC1D22AQ8WUA7 517 aa11.51□□□□□ -0.57
NPLOC4-208ENST00000572351 ZNF512BQ96KM6 892 aaPredicted RBP11.51□□□□□ -0.57
NPLOC4-208ENST00000572351 BOLA2Q9H3K6 86 aa11.51□□□□□ -0.57
NPLOC4-208ENST00000572351 KCNQ5Q9NR82 932 aa11.51□□□□□ -0.57
NPLOC4-208ENST00000572351 SNRKQ9NRH2 765 aa11.51□□□□□ -0.57
NPLOC4-208ENST00000572351 HMG20BQ9P0W2 317 aa11.51□□□□□ -0.57
NPLOC4-208ENST00000572351 ZC3H4Q9UPT8 1303 aaKnown RBP11.51□□□□□ -0.57
NPLOC4-208ENST00000572351 LTBP1Q14766 1721 aa11.51□□□□□ -0.57
NPLOC4-208ENST00000572351 CACNA1SQ13698 1873 aa11.51□□□□□ -0.57
NPLOC4-208ENST00000572351 PSMD14O00487 310 aa11.5□□□□□ -0.57
NPLOC4-208ENST00000572351 PDE4AP27815 886 aa11.5□□□□□ -0.57
NPLOC4-208ENST00000572351 MCAMP43121 646 aa11.5□□□□□ -0.57
NPLOC4-208ENST00000572351 RGS3P49796 1198 aa11.5□□□□□ -0.57
NPLOC4-208ENST00000572351 PDE1AP54750 535 aa11.5□□□□□ -0.57
NPLOC4-208ENST00000572351 SCARF1Q14162 830 aa11.5□□□□□ -0.57
NPLOC4-208ENST00000572351 MFSD14BQ5SR56 506 aa11.5□□□□□ -0.57
NPLOC4-208ENST00000572351 PI16Q6UXB8 463 aa11.5□□□□□ -0.57
NPLOC4-208ENST00000572351 ZGPATQ8N5A5 531 aaKnown RBP11.5□□□□□ -0.57
NPLOC4-208ENST00000572351 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.5□□□□□ -0.57
NPLOC4-208ENST00000572351 ARFGEF1Q9Y6D6 1849 aa11.5□□□□□ -0.57
NPLOC4-208ENST00000572351 ZNF541Q9H0D2 1346 aa11.5□□□□□ -0.57
NPLOC4-208ENST00000572351 F8W031 263 aaPredicted RBP11.49□□□□□ -0.57
NPLOC4-208ENST00000572351 GOLIM4O00461 696 aa11.49□□□□□ -0.57
NPLOC4-208ENST00000572351 ZAP70P43403 619 aa11.49□□□□□ -0.57
NPLOC4-208ENST00000572351 DACT2Q5SW24 774 aa11.49□□□□□ -0.57
NPLOC4-208ENST00000572351 RSBN1LQ6PCB5 846 aaPredicted RBP11.49□□□□□ -0.57
NPLOC4-208ENST00000572351 PLEKHM2Q8IWE5 1019 aa11.49□□□□□ -0.57
NPLOC4-208ENST00000572351 GPC2Q8N158 579 aa11.49□□□□□ -0.57
NPLOC4-208ENST00000572351 HAUS7Q99871 368 aa11.49□□□□□ -0.57
NPLOC4-208ENST00000572351 ABCF2Q9UG63 623 aa11.49□□□□□ -0.57
NPLOC4-208ENST00000572351 STAP2Q9UGK3 403 aa11.49□□□□□ -0.57
NPLOC4-208ENST00000572351 AOX1Q06278 1338 aa11.49□□□□□ -0.57
NPLOC4-208ENST00000572351 PDS5AQ29RF7 1337 aaKnown RBP11.49□□□□□ -0.57
NPLOC4-208ENST00000572351 FAM205AQ6ZU69 1335 aa11.49□□□□□ -0.57
NPLOC4-208ENST00000572351 MYO3BQ8WXR4 1341 aa11.49□□□□□ -0.57
NPLOC4-208ENST00000572351 COL4A5P29400 1685 aa11.49□□□□□ -0.57
NPLOC4-208ENST00000572351 TTF1Q15361 905 aaPredicted RBP11.48□□□□□ -0.57
NPLOC4-208ENST00000572351 SPTY2D1Q68D10 685 aaPredicted RBP11.48□□□□□ -0.57
NPLOC4-208ENST00000572351 TBC1D9Q6ZT07 1266 aa11.48□□□□□ -0.57
NPLOC4-208ENST00000572351 PI4K2BQ8TCG2 481 aa11.48□□□□□ -0.57
NPLOC4-208ENST00000572351 MXD3Q9BW11 206 aa11.48□□□□□ -0.57
NPLOC4-208ENST00000572351 PAG1Q9NWQ8 432 aa11.48□□□□□ -0.57
NPLOC4-208ENST00000572351 RAI14Q9P0K7 980 aa11.48□□□□□ -0.57
NPLOC4-208ENST00000572351 LRP2BPQ9P2M1 347 aa11.48□□□□□ -0.57
NPLOC4-208ENST00000572351 ZBTB12Q9Y330 459 aaPredicted RBP11.48□□□□□ -0.57
NPLOC4-208ENST00000572351 NDUFB9Q9Y6M9 179 aa11.48□□□□□ -0.57
NPLOC4-208ENST00000572351 SALL3Q9BXA9 1300 aa11.48□□□□□ -0.57
NPLOC4-208ENST00000572351 COL1A1P02452 1464 aaPredicted RBP11.47□□□□□ -0.57
NPLOC4-208ENST00000572351 TRIM6-TRIM34B2RNG4 842 aa11.47□□□□□ -0.57
NPLOC4-208ENST00000572351 IDH1O75874 414 aaKnown RBP11.47□□□□□ -0.57
NPLOC4-208ENST00000572351 DDNO94850 711 aaPredicted RBP11.47□□□□□ -0.57
NPLOC4-208ENST00000572351 MAP4K4O95819 1239 aaPredicted RBP11.47□□□□□ -0.57
NPLOC4-208ENST00000572351 CYP2E1P05181 493 aaPredicted RBP11.47□□□□□ -0.57
NPLOC4-208ENST00000572351 LDHBP07195 334 aaKnown RBP11.47□□□□□ -0.57
NPLOC4-208ENST00000572351 VIL1P09327 827 aaKnown RBP11.47□□□□□ -0.57
NPLOC4-208ENST00000572351 RPS12P25398 132 aaKnown RBP11.47□□□□□ -0.57
NPLOC4-208ENST00000572351 LMOD1P29536 600 aaPredicted RBP11.47□□□□□ -0.57
NPLOC4-208ENST00000572351 GMPSP49915 693 aaPredicted RBP11.47□□□□□ -0.57
NPLOC4-208ENST00000572351 FKBP1AP62942 108 aaKnown RBP11.47□□□□□ -0.57
NPLOC4-208ENST00000572351 ERICH6Q7L0X2 663 aa11.47□□□□□ -0.57
NPLOC4-208ENST00000572351 SKAP1Q86WV1 359 aa11.47□□□□□ -0.57
NPLOC4-208ENST00000572351 DZIP1Q86YF9 867 aaKnown RBP11.47□□□□□ -0.57
NPLOC4-208ENST00000572351 KIAA0825Q8IV33 1275 aa11.47□□□□□ -0.57
NPLOC4-208ENST00000572351 OGFOD1Q8N543 542 aa11.47□□□□□ -0.57
NPLOC4-208ENST00000572351 AGBL3Q8NEM8 1001 aa11.47□□□□□ -0.57
NPLOC4-208ENST00000572351 OSBPL3Q9H4L5 887 aa11.47□□□□□ -0.57
NPLOC4-208ENST00000572351 HDAC9Q9UKV0 1011 aa11.47□□□□□ -0.57
NPLOC4-208ENST00000572351 SALL1Q9NSC2 1324 aa11.46□□□□□ -0.57
NPLOC4-208ENST00000572351 GLTPD2A6NH11 291 aa11.46□□□□□ -0.57
NPLOC4-208ENST00000572351 USP17L8P0C7I0 530 aa11.46□□□□□ -0.57
NPLOC4-208ENST00000572351 MAP3K12Q12852 859 aa11.46□□□□□ -0.57
NPLOC4-208ENST00000572351 CNTROBQ8N137 903 aa11.46□□□□□ -0.57
NPLOC4-208ENST00000572351 CERS5Q8N5B7 392 aa11.46□□□□□ -0.57
NPLOC4-208ENST00000572351 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.46□□□□□ -0.571e-9■■■□□ 15.7
NPLOC4-208ENST00000572351 ANTXR1Q9H6X2 564 aa11.46□□□□□ -0.57
NPLOC4-208ENST00000572351 TTF2Q9UNY4 1162 aaKnown RBP11.46□□□□□ -0.57
NPLOC4-208ENST00000572351 SUGT1Q9Y2Z0 365 aa11.46□□□□□ -0.57
NPLOC4-208ENST00000572351 FER1L6Q2WGJ9 1857 aa11.46□□□□□ -0.58
NPLOC4-208ENST00000572351 MAST3O60307 1309 aa11.45□□□□□ -0.58
NPLOC4-208ENST00000572351 H7C1D1 291 aa11.45□□□□□ -0.58
NPLOC4-208ENST00000572351 PRDX5P30044 214 aa11.45□□□□□ -0.58
NPLOC4-208ENST00000572351 RBM5P52756 815 aaKnown RBP eCLIP11.45□□□□□ -0.58
NPLOC4-208ENST00000572351 CACNB1Q02641 598 aaPredicted RBP11.45□□□□□ -0.58
NPLOC4-208ENST00000572351 LRRFIP1Q32MZ4 808 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms