RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 ST5P78524 1137 aa17.82■□□□□ 0.44
SMG6-207ENST00000570756 APOBRQ0VD83 1088 aa17.82■□□□□ 0.44
SMG6-207ENST00000570756 KAZALD1Q96I82 304 aa17.82■□□□□ 0.44
SMG6-207ENST00000570756 TMX1Q9H3N1 280 aa17.82■□□□□ 0.44
SMG6-207ENST00000570756 CARMIL3Q8ND23 1372 aa17.82■□□□□ 0.44
SMG6-207ENST00000570756 LMOD1P29536 600 aaPredicted RBP17.82■□□□□ 0.44
SMG6-207ENST00000570756 JAKMIP3Q5VZ66 844 aa17.82■□□□□ 0.44
SMG6-207ENST00000570756 AGXT2Q9BYV1 514 aa17.82■□□□□ 0.44
SMG6-207ENST00000570756 PSD3Q9NYI0 1048 aa17.82■□□□□ 0.44
SMG6-207ENST00000570756 ZNF609O15014 1411 aa17.82■□□□□ 0.44
SMG6-207ENST00000570756 KCNQ3O43525 872 aa17.81■□□□□ 0.44
SMG6-207ENST00000570756 MYO1BO43795 1136 aa17.81■□□□□ 0.44
SMG6-207ENST00000570756 UBASH3AP57075 661 aa17.81■□□□□ 0.44
SMG6-207ENST00000570756 CCT2P78371 535 aaKnown RBP17.81■□□□□ 0.44
SMG6-207ENST00000570756 GUCY1B3Q02153 619 aa17.81■□□□□ 0.44
SMG6-207ENST00000570756 REXO1L1PQ8IX06 675 aa17.81■□□□□ 0.44
SMG6-207ENST00000570756 GOLGA5Q8TBA6 731 aa17.81■□□□□ 0.44
SMG6-207ENST00000570756 EXOC4Q96A65 974 aa17.81■□□□□ 0.44
SMG6-207ENST00000570756 EDC3Q96F86 508 aaKnown RBP17.81■□□□□ 0.44
SMG6-207ENST00000570756 UTP14AQ9BVJ6 771 aaKnown RBP17.81■□□□□ 0.44
SMG6-207ENST00000570756 LGR6Q9HBX8 967 aa17.81■□□□□ 0.44
SMG6-207ENST00000570756 POLR3EQ9NVU0 708 aa17.81■□□□□ 0.44
SMG6-207ENST00000570756 BIN1O00499 593 aa17.81■□□□□ 0.44
SMG6-207ENST00000570756 ARHGAP6O43182 974 aa17.81■□□□□ 0.44
SMG6-207ENST00000570756 SASH3O75995 380 aa17.81■□□□□ 0.44
SMG6-207ENST00000570756 SERPINC1P01008 464 aa17.81■□□□□ 0.44
SMG6-207ENST00000570756 CASQ1P31415 396 aa17.81■□□□□ 0.44
SMG6-207ENST00000570756 ZNF274Q96GC6 653 aaPredicted RBP17.81■□□□□ 0.44
SMG6-207ENST00000570756 RGPD8O14715 1765 aaPredicted RBP17.81■□□□□ 0.44
SMG6-207ENST00000570756 LAMA4Q16363 1823 aa17.8■□□□□ 0.44
SMG6-207ENST00000570756 NEDD4P46934 1319 aa17.8■□□□□ 0.44
SMG6-207ENST00000570756 SPTLC2O15270 562 aa17.8■□□□□ 0.44
SMG6-207ENST00000570756 ZNF202O95125 648 aa17.8■□□□□ 0.44
SMG6-207ENST00000570756 GNL2Q13823 731 aaKnown RBP17.8■□□□□ 0.44
SMG6-207ENST00000570756 CCDC129Q6ZRS4 1044 aa17.8■□□□□ 0.44
SMG6-207ENST00000570756 STOX1Q6ZVD7 989 aa17.8■□□□□ 0.44
SMG6-207ENST00000570756 CCDC191Q8NCU4 936 aa17.8■□□□□ 0.44
SMG6-207ENST00000570756 RABGGTAQ92696 567 aa17.8■□□□□ 0.44
SMG6-207ENST00000570756 EFCC1Q9HA90 598 aa17.8■□□□□ 0.44
SMG6-207ENST00000570756 USHBP1Q8N6Y0 703 aa17.8■□□□□ 0.44
SMG6-207ENST00000570756 XIRP1Q702N8 1843 aaKnown RBP17.79■□□□□ 0.44
SMG6-207ENST00000570756 TOP1P11387 765 aaKnown RBP17.79■□□□□ 0.44
SMG6-207ENST00000570756 MAP3K9P80192 1104 aa17.79■□□□□ 0.44
SMG6-207ENST00000570756 EXOSC10Q01780 885 aaKnown RBP17.79■□□□□ 0.44
SMG6-207ENST00000570756 PPP2R3AQ06190 1150 aa17.79■□□□□ 0.44
SMG6-207ENST00000570756 CFAP100Q494V2 611 aa17.79■□□□□ 0.44
SMG6-207ENST00000570756 SH3TC1Q8TE82 1336 aa17.79■□□□□ 0.44
SMG6-207ENST00000570756 MAPK8IP2Q13387 824 aaPredicted RBP17.79■□□□□ 0.44
SMG6-207ENST00000570756 CCDC34Q96HJ3 373 aa17.79■□□□□ 0.44
SMG6-207ENST00000570756 NCOA5Q9HCD5 579 aaKnown RBP17.79■□□□□ 0.44
SMG6-207ENST00000570756 ZCCHC17Q9NP64 241 aaKnown RBP17.79■□□□□ 0.44
SMG6-207ENST00000570756 PPP2R2CQ9Y2T4 447 aa17.79■□□□□ 0.44
SMG6-207ENST00000570756 MYL5Q02045 173 aa17.78■□□□□ 0.44
SMG6-207ENST00000570756 BRAPQ7Z569 592 aa17.78■□□□□ 0.44
SMG6-207ENST00000570756 VSTM4Q8IW00 320 aa17.78■□□□□ 0.44
SMG6-207ENST00000570756 GOLGA1Q92805 767 aa17.78■□□□□ 0.44
SMG6-207ENST00000570756 SEC62Q99442 399 aaKnown RBP17.78■□□□□ 0.44
SMG6-207ENST00000570756 DBNLQ9UJU6 430 aaKnown RBP17.78■□□□□ 0.44
SMG6-207ENST00000570756 MRFAP1Q9Y605 127 aa17.78■□□□□ 0.44
SMG6-207ENST00000570756 VWA3AA6NCI4 1184 aa17.78■□□□□ 0.44
SMG6-207ENST00000570756 FANCGO15287 622 aa17.78■□□□□ 0.44
SMG6-207ENST00000570756 PDIA3P30101 505 aaKnown RBP17.78■□□□□ 0.44
SMG6-207ENST00000570756 PROSER3Q2NL68 480 aa17.78■□□□□ 0.44
SMG6-207ENST00000570756 RSRC2Q7L4I2 434 aaKnown RBP17.78■□□□□ 0.44
SMG6-207ENST00000570756 FBXO18Q8NFZ0 1043 aa17.78■□□□□ 0.44
SMG6-207ENST00000570756 CLIC4Q9Y696 253 aa17.78■□□□□ 0.44
SMG6-207ENST00000570756 ANKARQ7Z5J8 1434 aa17.77■□□□□ 0.44
SMG6-207ENST00000570756 MYO1CO00159 1063 aa17.77■□□□□ 0.44
SMG6-207ENST00000570756 ATP1A3P13637 1013 aa17.77■□□□□ 0.44
SMG6-207ENST00000570756 CMA1P23946 247 aa17.77■□□□□ 0.44
SMG6-207ENST00000570756 GNG11P61952 73 aa17.77■□□□□ 0.44
SMG6-207ENST00000570756 TNNI3KQ59H18 835 aa17.77■□□□□ 0.44
SMG6-207ENST00000570756 AKAP4Q5JQC9 854 aa17.77■□□□□ 0.44
SMG6-207ENST00000570756 SYNE3Q6ZMZ3 975 aa17.77■□□□□ 0.44
SMG6-207ENST00000570756 DSCC1Q9BVC3 393 aa17.77■□□□□ 0.44
SMG6-207ENST00000570756 FPGT-TNNI3KV9GXZ4 949 aa17.77■□□□□ 0.44
SMG6-207ENST00000570756 CCDC151A5D8V7 595 aa17.77■□□□□ 0.43
SMG6-207ENST00000570756 PLCD3Q8N3E9 789 aa17.77■□□□□ 0.43
SMG6-207ENST00000570756 HAUS7Q99871 368 aa17.77■□□□□ 0.43
SMG6-207ENST00000570756 FUT8Q9BYC5 575 aa17.77■□□□□ 0.43
SMG6-207ENST00000570756 PARD6BQ9BYG5 372 aa17.77■□□□□ 0.43
SMG6-207ENST00000570756 LMO7Q8WWI1 1683 aa17.76■□□□□ 0.43
SMG6-207ENST00000570756 BRD3Q15059 726 aa17.76■□□□□ 0.43
SMG6-207ENST00000570756 KLHDC4Q8TBB5 520 aa17.76■□□□□ 0.43
SMG6-207ENST00000570756 C8orf76Q96K31 380 aa17.76■□□□□ 0.43
SMG6-207ENST00000570756 HSD3B7Q9H2F3 369 aa17.76■□□□□ 0.43
SMG6-207ENST00000570756 RSPH14Q9UHP6 348 aa17.76■□□□□ 0.43
SMG6-207ENST00000570756 ADAM21Q9UKJ8 722 aa17.76■□□□□ 0.43
SMG6-207ENST00000570756 USP54Q70EL1 1684 aa17.76■□□□□ 0.43
SMG6-207ENST00000570756 PFKFB1P16118 471 aa17.76■□□□□ 0.43
SMG6-207ENST00000570756 CTR9Q6PD62 1173 aa17.76■□□□□ 0.43
SMG6-207ENST00000570756 FAM177A1Q8N128 213 aaPredicted RBP17.76■□□□□ 0.43
SMG6-207ENST00000570756 IQUBQ8NA54 791 aa17.76■□□□□ 0.43
SMG6-207ENST00000570756 COPRSQ9NQ92 184 aa17.76■□□□□ 0.43
SMG6-207ENST00000570756 DHX16O60231 1041 aaKnown RBP17.75■□□□□ 0.43
SMG6-207ENST00000570756 LMAN1P49257 510 aa17.75■□□□□ 0.43
SMG6-207ENST00000570756 NEXNQ0ZGT2 675 aa17.75■□□□□ 0.43
SMG6-207ENST00000570756 MYSM1Q5VVJ2 828 aa17.75■□□□□ 0.43
SMG6-207ENST00000570756 NFATC2IPQ8NCF5 419 aa17.75■□□□□ 0.43
SMG6-207ENST00000570756 HELLSQ9NRZ9 838 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms