RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 ARHGEF6Q15052 776 aa13.55□□□□□ -0.24
CTDNEP1-202ENST00000570380 SUPT20HL1Q3ZLR7 823 aa13.55□□□□□ -0.24
CTDNEP1-202ENST00000570380 ANKRD13AQ8IZ07 590 aa13.55□□□□□ -0.24
CTDNEP1-202ENST00000570380 MTMR14Q8NCE2 650 aa13.55□□□□□ -0.24
CTDNEP1-202ENST00000570380 DPF3Q92784 378 aa13.55□□□□□ -0.24
CTDNEP1-202ENST00000570380 CWC25Q9NXE8 425 aaPredicted RBP13.55□□□□□ -0.24
CTDNEP1-202ENST00000570380 CLRN2A0PK11 232 aa13.54□□□□□ -0.24
CTDNEP1-202ENST00000570380 CTSWP56202 376 aa13.54□□□□□ -0.24
CTDNEP1-202ENST00000570380 TAF1CQ15572 869 aaPredicted RBP13.54□□□□□ -0.24
CTDNEP1-202ENST00000570380 NEUROD2Q15784 382 aa13.54□□□□□ -0.24
CTDNEP1-202ENST00000570380 DUSP27Q5VZP5 1158 aa13.54□□□□□ -0.24
CTDNEP1-202ENST00000570380 CERS5Q8N5B7 392 aa13.54□□□□□ -0.24
CTDNEP1-202ENST00000570380 TTLL11Q8NHH1 800 aa13.54□□□□□ -0.24
CTDNEP1-202ENST00000570380 BRI3BPQ8WY22 251 aa13.54□□□□□ -0.24
CTDNEP1-202ENST00000570380 OPTNQ96CV9 577 aa13.54□□□□□ -0.24
CTDNEP1-202ENST00000570380 SHISA4Q96DD7 197 aa13.54□□□□□ -0.24
CTDNEP1-202ENST00000570380 GREM2Q9H772 168 aa13.54□□□□□ -0.24
CTDNEP1-202ENST00000570380 ELP3Q9H9T3 547 aa13.54□□□□□ -0.24
CTDNEP1-202ENST00000570380 ZFYVE28Q9HCC9 887 aa13.54□□□□□ -0.24
CTDNEP1-202ENST00000570380 LEMD3Q9Y2U8 911 aa13.54□□□□□ -0.24
CTDNEP1-202ENST00000570380 AOX1Q06278 1338 aa13.54□□□□□ -0.24
CTDNEP1-202ENST00000570380 A0A1B0GUL6 1792 aa13.53□□□□□ -0.24
CTDNEP1-202ENST00000570380 PRMT6Q96LA8 375 aaPredicted RBP13.53□□□□□ -0.24
CTDNEP1-202ENST00000570380 ARHGAP39Q9C0H5 1083 aa13.53□□□□□ -0.24
CTDNEP1-202ENST00000570380 TRIM35Q9UPQ4 493 aa13.53□□□□□ -0.24
CTDNEP1-202ENST00000570380 MTFR1Q15390 333 aa13.52□□□□□ -0.25
CTDNEP1-202ENST00000570380 CFAP100Q494V2 611 aa13.52□□□□□ -0.25
CTDNEP1-202ENST00000570380 FAM43AQ8N2R8 423 aa13.52□□□□□ -0.25
CTDNEP1-202ENST00000570380 CNKSR2Q8WXI2 1034 aa13.52□□□□□ -0.25
CTDNEP1-202ENST00000570380 METTL22Q9BUU2 404 aaPredicted RBP13.52□□□□□ -0.25
CTDNEP1-202ENST00000570380 VEZTQ9HBM0 779 aa13.52□□□□□ -0.25
CTDNEP1-202ENST00000570380 CD209Q9NNX6 404 aa13.52□□□□□ -0.25
CTDNEP1-202ENST00000570380 CCL15-CCL14A0A0B4J2E2 113 aa13.51□□□□□ -0.25
CTDNEP1-202ENST00000570380 SPDYE2BA6NHP3 402 aa13.51□□□□□ -0.25
CTDNEP1-202ENST00000570380 MYO1BO43795 1136 aa13.51□□□□□ -0.25
CTDNEP1-202ENST00000570380 SPDYE6P0CI01 402 aa13.51□□□□□ -0.25
CTDNEP1-202ENST00000570380 RASA3Q14644 834 aa13.51□□□□□ -0.25
CTDNEP1-202ENST00000570380 CCL15Q16663 113 aa13.51□□□□□ -0.25
CTDNEP1-202ENST00000570380 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.51□□□□□ -0.25
CTDNEP1-202ENST00000570380 ARAP2Q8WZ64 1704 aa13.5□□□□□ -0.25
CTDNEP1-202ENST00000570380 F8W031 263 aaPredicted RBP13.5□□□□□ -0.25
CTDNEP1-202ENST00000570380 SOX1O00570 391 aaPredicted RBP13.5□□□□□ -0.25
CTDNEP1-202ENST00000570380 LACTBP83111 547 aaPredicted RBP13.5□□□□□ -0.25
CTDNEP1-202ENST00000570380 UBE2Q1Q7Z7E8 422 aa13.5□□□□□ -0.25
CTDNEP1-202ENST00000570380 MNX1P50219 401 aaPredicted RBP13.49□□□□□ -0.25
CTDNEP1-202ENST00000570380 GTF2A2P52657 109 aa13.49□□□□□ -0.25
CTDNEP1-202ENST00000570380 CCDC146Q8IYE0 955 aa13.49□□□□□ -0.25
CTDNEP1-202ENST00000570380 ANKRD2Q9GZV1 360 aa13.49□□□□□ -0.25
CTDNEP1-202ENST00000570380 ALPK3Q96L96 1907 aa13.49□□□□□ -0.25
CTDNEP1-202ENST00000570380 MGAMO43451 1857 aa13.48□□□□□ -0.25
CTDNEP1-202ENST00000570380 IRS2Q9Y4H2 1338 aa13.48□□□□□ -0.25
CTDNEP1-202ENST00000570380 ZBTB7BO15156 539 aaPredicted RBP13.48□□□□□ -0.25
CTDNEP1-202ENST00000570380 TLR2O60603 784 aa13.48□□□□□ -0.25
CTDNEP1-202ENST00000570380 IGKV5-2P06315 115 aa13.48□□□□□ -0.25
CTDNEP1-202ENST00000570380 IGHMBP2P38935 993 aaKnown RBP13.48□□□□□ -0.25
CTDNEP1-202ENST00000570380 VGLL4Q14135 290 aa13.48□□□□□ -0.25
CTDNEP1-202ENST00000570380 KIF22Q14807 665 aa13.48□□□□□ -0.25
CTDNEP1-202ENST00000570380 CDAN1Q8IWY9 1227 aa13.48□□□□□ -0.25
CTDNEP1-202ENST00000570380 LRCH3Q96II8 777 aa13.48□□□□□ -0.25
CTDNEP1-202ENST00000570380 MBIPQ9NS73 344 aa13.48□□□□□ -0.25
CTDNEP1-202ENST00000570380 UNC80Q8N2C7 3258 aa13.47□□□□□ -0.25
CTDNEP1-202ENST00000570380 SNAP23O00161 211 aa13.47□□□□□ -0.25
CTDNEP1-202ENST00000570380 ECM2O94769 699 aaPredicted RBP13.47□□□□□ -0.25
CTDNEP1-202ENST00000570380 GNRH1P01148 92 aa13.47□□□□□ -0.25
CTDNEP1-202ENST00000570380 CTGFP29279 349 aa13.47□□□□□ -0.25
CTDNEP1-202ENST00000570380 GJA8P48165 433 aa13.47□□□□□ -0.25
CTDNEP1-202ENST00000570380 PRMT2P55345 433 aa13.47□□□□□ -0.25
CTDNEP1-202ENST00000570380 TEPSINQ96N21 525 aa13.47□□□□□ -0.25
CTDNEP1-202ENST00000570380 HTATIP2Q9BUP3 242 aa13.47□□□□□ -0.25
CTDNEP1-202ENST00000570380 MAP3K2Q9Y2U5 619 aa13.47□□□□□ -0.25
CTDNEP1-202ENST00000570380 NR2E3Q9Y5X4 410 aa13.47□□□□□ -0.25
CTDNEP1-202ENST00000570380 A0A1W2PPC1 479 aa13.46□□□□□ -0.25
CTDNEP1-202ENST00000570380 ELL2O00472 640 aaPredicted RBP13.46□□□□□ -0.25
CTDNEP1-202ENST00000570380 KCNJ4P48050 445 aa13.46□□□□□ -0.25
CTDNEP1-202ENST00000570380 RBM5P52756 815 aaKnown RBP eCLIP13.46□□□□□ -0.25
CTDNEP1-202ENST00000570380 MAP3K9P80192 1104 aa13.46□□□□□ -0.25
CTDNEP1-202ENST00000570380 CHRNDQ07001 517 aa13.46□□□□□ -0.25
CTDNEP1-202ENST00000570380 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.46□□□□□ -0.25
CTDNEP1-202ENST00000570380 NKX2-3Q8TAU0 364 aa13.46□□□□□ -0.25
CTDNEP1-202ENST00000570380 BTBD19C9JJ37 291 aa13.45□□□□□ -0.26
CTDNEP1-202ENST00000570380 DDX58O95786 925 aaKnown RBP13.45□□□□□ -0.26
CTDNEP1-202ENST00000570380 GJB1P08034 283 aa13.45□□□□□ -0.26
CTDNEP1-202ENST00000570380 CCL5P13501 91 aa13.45□□□□□ -0.26
CTDNEP1-202ENST00000570380 IL1R1P14778 569 aa13.45□□□□□ -0.26
CTDNEP1-202ENST00000570380 ITGA6P23229 1130 aa13.45□□□□□ -0.26
CTDNEP1-202ENST00000570380 FKBP1AP62942 108 aaKnown RBP13.45□□□□□ -0.26
CTDNEP1-202ENST00000570380 SPDYE2Q495Y8 402 aa13.45□□□□□ -0.26
CTDNEP1-202ENST00000570380 MPHOSPH8Q99549 860 aa13.45□□□□□ -0.26
CTDNEP1-202ENST00000570380 ZNF70Q9UC06 446 aaPredicted RBP13.45□□□□□ -0.26
CTDNEP1-202ENST00000570380 SRRDQ9UH36 339 aa13.45□□□□□ -0.26
CTDNEP1-202ENST00000570380 JAG2Q9Y219 1238 aa13.45□□□□□ -0.26
CTDNEP1-202ENST00000570380 SPDYE5A6NIY4 337 aa13.44□□□□□ -0.26
CTDNEP1-202ENST00000570380 H7C1W4 665 aa13.44□□□□□ -0.26
CTDNEP1-202ENST00000570380 TAF5LO75529 589 aa13.44□□□□□ -0.26
CTDNEP1-202ENST00000570380 WDHD1O75717 1129 aaPredicted RBP13.44□□□□□ -0.26
CTDNEP1-202ENST00000570380 ZNF853P0CG23 659 aa13.44□□□□□ -0.26
CTDNEP1-202ENST00000570380 GRK4P32298 578 aa13.44□□□□□ -0.26
CTDNEP1-202ENST00000570380 TNFAIP1Q13829 316 aa13.44□□□□□ -0.26
CTDNEP1-202ENST00000570380 CWF19L2Q2TBE0 894 aaKnown RBP13.44□□□□□ -0.26
CTDNEP1-202ENST00000570380 C15orf52Q6ZUT6 534 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms