RNA–Protein interactions for RNA: ENST00000570124.1

SIN3A-215, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-215ENST00000570124 MAP3K5Q99683 1374 aa6.91□□□□□ -1.3
SIN3A-215ENST00000570124 PLEKHG2Q9H7P9 1386 aa6.91□□□□□ -1.3
SIN3A-215ENST00000570124 KCPQ6ZWJ8 1503 aa6.91□□□□□ -1.3
SIN3A-215ENST00000570124 COL24A1Q17RW2 1714 aa6.9□□□□□ -1.3
SIN3A-215ENST00000570124 TAF1P21675 1872 aa6.9□□□□□ -1.3
SIN3A-215ENST00000570124 ADH1CP00326 375 aa6.9□□□□□ -1.3
SIN3A-215ENST00000570124 PHKG2P15735 406 aa6.9□□□□□ -1.3
SIN3A-215ENST00000570124 ATP1A2P50993 1020 aa6.9□□□□□ -1.3
SIN3A-215ENST00000570124 GTF2IP78347 998 aa6.9□□□□□ -1.3
SIN3A-215ENST00000570124 FOXC1Q12948 553 aa6.9□□□□□ -1.3
SIN3A-215ENST00000570124 DCTN1Q14203 1278 aa6.9□□□□□ -1.3
SIN3A-215ENST00000570124 MPNDQ8N594 471 aa6.9□□□□□ -1.3
SIN3A-215ENST00000570124 MARCH10Q8NA82 808 aaPredicted RBP6.9□□□□□ -1.3
SIN3A-215ENST00000570124 ZCRB1Q8TBF4 217 aaKnown RBP6.9□□□□□ -1.3
SIN3A-215ENST00000570124 STK32AQ8WU08 396 aa6.9□□□□□ -1.3
SIN3A-215ENST00000570124 CLP1Q92989 425 aaKnown RBP6.9□□□□□ -1.3
SIN3A-215ENST00000570124 ZNF594Q96JF6 807 aaPredicted RBP6.9□□□□□ -1.3
SIN3A-215ENST00000570124 YTHDC1Q96MU7 727 aaKnown RBP6.9□□□□□ -1.3
SIN3A-215ENST00000570124 BIN2Q9UBW5 565 aaPredicted RBP6.9□□□□□ -1.3
SIN3A-215ENST00000570124 MAPK8IP3Q9UPT6 1336 aa6.9□□□□□ -1.3
SIN3A-215ENST00000570124 EIF5BO60841 1220 aaKnown RBP6.89□□□□□ -1.31
SIN3A-215ENST00000570124 MYCP01106 439 aaPredicted RBP6.89□□□□□ -1.31
SIN3A-215ENST00000570124 GRM5P41594 1212 aa6.89□□□□□ -1.31
SIN3A-215ENST00000570124 RIPK4P57078 832 aa6.89□□□□□ -1.31
SIN3A-215ENST00000570124 RBM6P78332 1123 aaKnown RBP6.89□□□□□ -1.31
SIN3A-215ENST00000570124 CLDN10P78369 228 aa6.89□□□□□ -1.31
SIN3A-215ENST00000570124 HNRNPUQ00839 825 aaKnown RBP eCLIP6.89□□□□□ -1.31
SIN3A-215ENST00000570124 DHX9Q08211 1270 aaKnown RBP6.89□□□□□ -1.31
SIN3A-215ENST00000570124 USP4Q13107 963 aa6.89□□□□□ -1.31
SIN3A-215ENST00000570124 PTK7Q13308 1070 aa6.89□□□□□ -1.31
SIN3A-215ENST00000570124 DDB1Q16531 1140 aa6.89□□□□□ -1.31
SIN3A-215ENST00000570124 PLEKHO1Q53GL0 409 aaPredicted RBP6.89□□□□□ -1.31
SIN3A-215ENST00000570124 PHLDB3Q6NSJ2 640 aa6.89□□□□□ -1.31
SIN3A-215ENST00000570124 ZNF530Q6P9A1 599 aaPredicted RBP6.89□□□□□ -1.31
SIN3A-215ENST00000570124 MPRIPQ6WCQ1 1025 aa6.89□□□□□ -1.31
SIN3A-215ENST00000570124 MCM10Q7L590 875 aa6.89□□□□□ -1.31
SIN3A-215ENST00000570124 IL17REQ8NFR9 667 aa6.89□□□□□ -1.31
SIN3A-215ENST00000570124 DDX54Q8TDD1 881 aaKnown RBP6.89□□□□□ -1.31
SIN3A-215ENST00000570124 THUMPD2Q9BTF0 503 aaKnown RBP6.89□□□□□ -1.31
SIN3A-215ENST00000570124 LGR6Q9HBX8 967 aa6.89□□□□□ -1.31
SIN3A-215ENST00000570124 DNAAF2Q9NVR5 837 aaKnown RBP6.89□□□□□ -1.31
SIN3A-215ENST00000570124 V9GY48 417 aaPredicted RBP6.89□□□□□ -1.31
SIN3A-215ENST00000570124 PCDH11XQ9BZA7 1347 aa6.89□□□□□ -1.31
SIN3A-215ENST00000570124 PCDH11YQ9BZA8 1340 aa6.89□□□□□ -1.31
SIN3A-215ENST00000570124 CEMIPQ8WUJ3 1361 aa6.89□□□□□ -1.31
SIN3A-215ENST00000570124 SCN7AQ01118 1682 aa6.88□□□□□ -1.31
SIN3A-215ENST00000570124 ZNF521Q96K83 1311 aa6.88□□□□□ -1.31
SIN3A-215ENST00000570124 EXOC5O00471 708 aa6.88□□□□□ -1.31
SIN3A-215ENST00000570124 ALDH1A1P00352 501 aa6.88□□□□□ -1.31
SIN3A-215ENST00000570124 RXRBP28702 533 aa6.88□□□□□ -1.31
SIN3A-215ENST00000570124 SCTRP47872 440 aa6.88□□□□□ -1.31
SIN3A-215ENST00000570124 NR5A1Q13285 461 aa6.88□□□□□ -1.31
SIN3A-215ENST00000570124 AMOTQ4VCS5 1084 aa6.88□□□□□ -1.31
SIN3A-215ENST00000570124 AKAP4Q5JQC9 854 aa6.88□□□□□ -1.31
SIN3A-215ENST00000570124 ANKMY2Q8IV38 441 aa6.88□□□□□ -1.31
SIN3A-215ENST00000570124 CCDC116Q8IYX3 515 aa6.88□□□□□ -1.31
SIN3A-215ENST00000570124 IFNL2Q8IZJ0 200 aa6.88□□□□□ -1.31
SIN3A-215ENST00000570124 FAM200AQ8TCP9 573 aa6.88□□□□□ -1.31
SIN3A-215ENST00000570124 SPATA32Q96LK8 384 aa6.88□□□□□ -1.31
SIN3A-215ENST00000570124 PNNQ9H307 717 aaKnown RBP6.88□□□□□ -1.31
SIN3A-215ENST00000570124 CYLDQ9NQC7 956 aa6.88□□□□□ -1.31
SIN3A-215ENST00000570124 TMPRSS4Q9NRS4 437 aa6.88□□□□□ -1.31
SIN3A-215ENST00000570124 PKD2L1Q9P0L9 805 aa6.88□□□□□ -1.31
SIN3A-215ENST00000570124 KIAA1024Q9UPX6 916 aa6.88□□□□□ -1.31
SIN3A-215ENST00000570124 SPG7Q9UQ90 795 aa6.88□□□□□ -1.31
SIN3A-215ENST00000570124 CCDC88AQ3V6T2 1871 aa6.87□□□□□ -1.31
SIN3A-215ENST00000570124 A0A1B0GUL6 1792 aa6.87□□□□□ -1.31
SIN3A-215ENST00000570124 DDX60Q8IY21 1712 aaKnown RBP6.87□□□□□ -1.31
SIN3A-215ENST00000570124 ANKRD33BA6NCL7 494 aa6.87□□□□□ -1.31
SIN3A-215ENST00000570124 GNAT3A8MTJ3 354 aa6.87□□□□□ -1.31
SIN3A-215ENST00000570124 NR3C2P08235 984 aa6.87□□□□□ -1.31
SIN3A-215ENST00000570124 DPYDQ12882 1025 aa6.87□□□□□ -1.31
SIN3A-215ENST00000570124 SWI5Q1ZZU3 235 aa6.87□□□□□ -1.31
SIN3A-215ENST00000570124 CC2D2BQ6DHV5 1058 aa6.87□□□□□ -1.31
SIN3A-215ENST00000570124 PTF1AQ7RTS3 328 aa6.87□□□□□ -1.31
SIN3A-215ENST00000570124 LARGE2Q8N3Y3 721 aa6.87□□□□□ -1.31
SIN3A-215ENST00000570124 GAS2L2Q8NHY3 880 aa6.87□□□□□ -1.31
SIN3A-215ENST00000570124 BCL9O00512 1426 aa6.86□□□□□ -1.31
SIN3A-215ENST00000570124 ANKRD31Q8N7Z5 1873 aa6.86□□□□□ -1.31
SIN3A-215ENST00000570124 ZBED9Q6R2W3 1325 aa6.86□□□□□ -1.31
SIN3A-215ENST00000570124 RNMTO43148 476 aaKnown RBP6.86□□□□□ -1.31
SIN3A-215ENST00000570124 NEFMP07197 916 aa6.86□□□□□ -1.31
SIN3A-215ENST00000570124 ATP2B4P23634 1241 aa6.86□□□□□ -1.31
SIN3A-215ENST00000570124 ERVK-9P63128 1117 aa6.86□□□□□ -1.31
SIN3A-215ENST00000570124 C1orf141Q5JVX7 400 aa6.86□□□□□ -1.31
SIN3A-215ENST00000570124 PPP1R26Q5T8A7 1209 aaPredicted RBP6.86□□□□□ -1.31
SIN3A-215ENST00000570124 NPAS4Q8IUM7 802 aa6.86□□□□□ -1.31
SIN3A-215ENST00000570124 ZNF784Q8NCA9 323 aaPredicted RBP6.86□□□□□ -1.31
SIN3A-215ENST00000570124 TPCN2Q8NHX9 752 aa6.86□□□□□ -1.31
SIN3A-215ENST00000570124 C1orf216Q8TAB5 229 aa6.86□□□□□ -1.31
SIN3A-215ENST00000570124 EGFL7Q9UHF1 273 aa6.86□□□□□ -1.31
SIN3A-215ENST00000570124 RBM19Q9Y4C8 960 aaKnown RBP6.86□□□□□ -1.31
SIN3A-215ENST00000570124 PCDHGA11Q9Y5H2 935 aa6.86□□□□□ -1.31
SIN3A-215ENST00000570124 WASF2Q9Y6W5 498 aa6.86□□□□□ -1.31
SIN3A-215ENST00000570124 TNFRSF10AO00220 468 aa6.85□□□□□ -1.31
SIN3A-215ENST00000570124 ZBTB7BO15156 539 aaPredicted RBP6.85□□□□□ -1.31
SIN3A-215ENST00000570124 KCNQ2O43526 872 aa6.85□□□□□ -1.31
SIN3A-215ENST00000570124 NNTQ13423 1086 aa6.85□□□□□ -1.31
SIN3A-215ENST00000570124 CCDC102BQ68D86 513 aa6.85□□□□□ -1.31
SIN3A-215ENST00000570124 KRT27Q7Z3Y8 459 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms