RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 XKR5Q6UX68 686 aa4.4□□□□□ -1.71
CNOT1-221ENST00000569924 PI16Q6UXB8 463 aa4.4□□□□□ -1.71
CNOT1-221ENST00000569924 THSD4Q6ZMP0 1018 aa4.4□□□□□ -1.71
CNOT1-221ENST00000569924 CERS3Q8IU89 383 aa4.4□□□□□ -1.71
CNOT1-221ENST00000569924 ZNF295-AS1Q8N0V1 137 aa4.4□□□□□ -1.71
CNOT1-221ENST00000569924 MPNDQ8N594 471 aa4.4□□□□□ -1.71
CNOT1-221ENST00000569924 EPS8L3Q8TE67 593 aaKnown RBP4.4□□□□□ -1.71
CNOT1-221ENST00000569924 MARVELD3Q96A59 401 aa4.4□□□□□ -1.71
CNOT1-221ENST00000569924 PHACTR1Q9C0D0 580 aa4.4□□□□□ -1.71
CNOT1-221ENST00000569924 ARHGEF10LQ9HCE6 1279 aa4.4□□□□□ -1.71
CNOT1-221ENST00000569924 COPRSQ9NQ92 184 aa4.4□□□□□ -1.71
CNOT1-221ENST00000569924 CABP1Q9NZU7 370 aa4.4□□□□□ -1.71
CNOT1-221ENST00000569924 PTPRUQ92729 1446 aa4.39□□□□□ -1.71
CNOT1-221ENST00000569924 SETD5Q9C0A6 1442 aa4.39□□□□□ -1.71
CNOT1-221ENST00000569924 XRN1Q8IZH2 1706 aaKnown RBP4.39□□□□□ -1.71
CNOT1-221ENST00000569924 A6NHS1 94 aa4.39□□□□□ -1.71
CNOT1-221ENST00000569924 POTECB2RU33 542 aa4.39□□□□□ -1.71
CNOT1-221ENST00000569924 USP17L7P0C7H9 530 aa4.39□□□□□ -1.71
CNOT1-221ENST00000569924 IRS1P35568 1242 aa4.39□□□□□ -1.71
CNOT1-221ENST00000569924 CCDC181Q5TID7 509 aa4.39□□□□□ -1.71
CNOT1-221ENST00000569924 USPL1Q5W0Q7 1092 aa4.39□□□□□ -1.71
CNOT1-221ENST00000569924 BRINP3Q76B58 766 aa4.39□□□□□ -1.71
CNOT1-221ENST00000569924 FILIP1Q7Z7B0 1213 aa4.39□□□□□ -1.71
CNOT1-221ENST00000569924 CCDC116Q8IYX3 515 aa4.39□□□□□ -1.71
CNOT1-221ENST00000569924 RNPC3Q96LT9 517 aaKnown RBP4.39□□□□□ -1.71
CNOT1-221ENST00000569924 SPON2Q9BUD6 331 aa4.39□□□□□ -1.71
CNOT1-221ENST00000569924 RSRP1Q9BUV0 290 aa4.39□□□□□ -1.71
CNOT1-221ENST00000569924 NOC4LQ9BVI4 516 aaKnown RBP4.39□□□□□ -1.71
CNOT1-221ENST00000569924 ZNF408Q9H9D4 720 aa4.39□□□□□ -1.71
CNOT1-221ENST00000569924 IFT57Q9NWB7 429 aa4.39□□□□□ -1.71
CNOT1-221ENST00000569924 COL4A3BPQ9Y5P4 624 aa4.39□□□□□ -1.71
CNOT1-221ENST00000569924 SETBP1Q9Y6X0 1596 aa4.39□□□□□ -1.71
CNOT1-221ENST00000569924 NUP155O75694 1391 aa4.39□□□□□ -1.71
CNOT1-221ENST00000569924 NRXN3Q9Y4C0 1643 aa4.39□□□□□ -1.71
CNOT1-221ENST00000569924 MST1RQ04912 1400 aa4.38□□□□□ -1.71
CNOT1-221ENST00000569924 ASXL1Q8IXJ9 1541 aa4.38□□□□□ -1.71
CNOT1-221ENST00000569924 POTEB3A0JP26 581 aa4.38□□□□□ -1.71
CNOT1-221ENST00000569924 TNFRSF21O75509 655 aa4.38□□□□□ -1.71
CNOT1-221ENST00000569924 MICAL2O94851 1124 aa4.38□□□□□ -1.71
CNOT1-221ENST00000569924 RXRBP28702 533 aa4.38□□□□□ -1.71
CNOT1-221ENST00000569924 CENPCQ03188 943 aa4.38□□□□□ -1.71
CNOT1-221ENST00000569924 NR5A1Q13285 461 aa4.38□□□□□ -1.71
CNOT1-221ENST00000569924 CLN3Q13286 438 aa4.38□□□□□ -1.71
CNOT1-221ENST00000569924 PLEKHG4Q58EX7 1191 aa4.38□□□□□ -1.71
CNOT1-221ENST00000569924 POTEBQ6S5H4 581 aa4.38□□□□□ -1.71
CNOT1-221ENST00000569924 ANKRD13DQ6ZTN6 518 aa4.38□□□□□ -1.71
CNOT1-221ENST00000569924 PPARGC1BQ86YN6 1023 aaKnown RBP4.38□□□□□ -1.71
CNOT1-221ENST00000569924 KIAA0825Q8IV33 1275 aa4.38□□□□□ -1.71
CNOT1-221ENST00000569924 CDAN1Q8IWY9 1227 aa4.38□□□□□ -1.71
CNOT1-221ENST00000569924 EHBP1Q8NDI1 1231 aa4.38□□□□□ -1.71
CNOT1-221ENST00000569924 LRRC59Q96AG4 307 aaKnown RBP4.38□□□□□ -1.71
CNOT1-221ENST00000569924 HS3ST6Q96QI5 342 aa4.38□□□□□ -1.71
CNOT1-221ENST00000569924 SRPK1Q96SB4 655 aaKnown RBP4.38□□□□□ -1.71
CNOT1-221ENST00000569924 FHDC1Q9C0D6 1143 aaPredicted RBP4.38□□□□□ -1.71
CNOT1-221ENST00000569924 TMX1Q9H3N1 280 aa4.38□□□□□ -1.71
CNOT1-221ENST00000569924 ZFYVE28Q9HCC9 887 aa4.38□□□□□ -1.71
CNOT1-221ENST00000569924 PCDH12Q9NPG4 1184 aa4.38□□□□□ -1.71
CNOT1-221ENST00000569924 KBTBD4Q9NVX7 518 aa4.38□□□□□ -1.71
CNOT1-221ENST00000569924 PGPEP1Q9NXJ5 209 aa4.38□□□□□ -1.71
CNOT1-221ENST00000569924 KLHL42Q9P2K6 505 aa4.38□□□□□ -1.71
CNOT1-221ENST00000569924 FOXD3Q9UJU5 478 aaPredicted RBP4.38□□□□□ -1.71
CNOT1-221ENST00000569924 BCS1LQ9Y276 419 aa4.38□□□□□ -1.71
CNOT1-221ENST00000569924 PPME1Q9Y570 386 aa4.38□□□□□ -1.71
CNOT1-221ENST00000569924 PARP3Q9Y6F1 533 aa4.38□□□□□ -1.71
CNOT1-221ENST00000569924 NHSL1Q5SYE7 1610 aa4.38□□□□□ -1.71
CNOT1-221ENST00000569924 ADGRL3Q9HAR2 1447 aa4.38□□□□□ -1.71
CNOT1-221ENST00000569924 LAMC1P11047 1609 aa4.37□□□□□ -1.71
CNOT1-221ENST00000569924 KLF4O43474 513 aa4.37□□□□□ -1.71
CNOT1-221ENST00000569924 DNAJC6O75061 913 aa4.37□□□□□ -1.71
CNOT1-221ENST00000569924 ADH1CP00326 375 aa4.37□□□□□ -1.71
CNOT1-221ENST00000569924 ETFBP38117 255 aa4.37□□□□□ -1.71
CNOT1-221ENST00000569924 NASPP49321 788 aaPredicted RBP4.37□□□□□ -1.71
CNOT1-221ENST00000569924 PWP1Q13610 501 aa4.37□□□□□ -1.71
CNOT1-221ENST00000569924 RAB33AQ14088 237 aa4.37□□□□□ -1.71
CNOT1-221ENST00000569924 HIF1AQ16665 826 aa4.37□□□□□ -1.71
CNOT1-221ENST00000569924 PDE12Q6L8Q7 609 aaKnown RBP4.37□□□□□ -1.71
CNOT1-221ENST00000569924 NXPE4Q6UWF7 544 aa4.37□□□□□ -1.71
CNOT1-221ENST00000569924 ANKS3Q6ZW76 656 aa4.37□□□□□ -1.71
CNOT1-221ENST00000569924 LRP10Q7Z4F1 713 aa4.37□□□□□ -1.71
CNOT1-221ENST00000569924 DHX37Q8IY37 1157 aaKnown RBP4.37□□□□□ -1.71
CNOT1-221ENST00000569924 SNX29Q8TEQ0 813 aa4.37□□□□□ -1.71
CNOT1-221ENST00000569924 NIFKQ9BYG3 293 aaKnown RBP4.37□□□□□ -1.71
CNOT1-221ENST00000569924 BCO2Q9BYV7 579 aa4.37□□□□□ -1.71
CNOT1-221ENST00000569924 SPC25Q9HBM1 224 aa4.37□□□□□ -1.71
CNOT1-221ENST00000569924 ADAMTS1Q9UHI8 967 aa4.37□□□□□ -1.71
CNOT1-221ENST00000569924 STRIP2Q9ULQ0 834 aa4.37□□□□□ -1.71
CNOT1-221ENST00000569924 FNDC3AQ9Y2H6 1198 aaKnown RBP4.37□□□□□ -1.71
CNOT1-221ENST00000569924 PRKAB1Q9Y478 270 aa4.37□□□□□ -1.71
CNOT1-221ENST00000569924 AFF2P51816 1311 aa4.37□□□□□ -1.71
CNOT1-221ENST00000569924 SPHKAPQ2M3C7 1700 aa4.37□□□□□ -1.71
CNOT1-221ENST00000569924 METP08581 1390 aa4.37□□□□□ -1.71
CNOT1-221ENST00000569924 PRAG1Q86YV5 1406 aa4.37□□□□□ -1.71
CNOT1-221ENST00000569924 TGFBR3LH3BV60 316 aa4.36□□□□□ -1.71
CNOT1-221ENST00000569924 PPEF1O14829 653 aaPredicted RBP4.36□□□□□ -1.71
CNOT1-221ENST00000569924 PPP1R12AO14974 1030 aaPredicted RBP4.36□□□□□ -1.71
CNOT1-221ENST00000569924 U2SURPO15042 1029 aaKnown RBP4.36□□□□□ -1.71
CNOT1-221ENST00000569924 PARNO95453 639 aaKnown RBP4.36□□□□□ -1.71
CNOT1-221ENST00000569924 ADH1AP07327 375 aa4.36□□□□□ -1.71
CNOT1-221ENST00000569924 GSTT1P30711 240 aa4.36□□□□□ -1.71
CNOT1-221ENST00000569924 SOX9P48436 509 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms