RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 GSTO1P78417 241 aa7.15□□□□□ -1.26
CYLD-216ENST00000569891 SYNE3Q6ZMZ3 975 aa7.15□□□□□ -1.26
CYLD-216ENST00000569891 BICDL1Q6ZP65 573 aa7.15□□□□□ -1.26
CYLD-216ENST00000569891 RUFY3Q7L099 469 aa7.15□□□□□ -1.26
CYLD-216ENST00000569891 NEK1Q96PY6 1258 aa7.15□□□□□ -1.26
CYLD-216ENST00000569891 FER1L6Q2WGJ9 1857 aa7.15□□□□□ -1.26
CYLD-216ENST00000569891 LDHCP07864 332 aa7.15□□□□□ -1.27
CYLD-216ENST00000569891 HCLS1P14317 486 aaPredicted RBP7.15□□□□□ -1.27
CYLD-216ENST00000569891 ARID4AP29374 1257 aaPredicted RBP7.15□□□□□ -1.27
CYLD-216ENST00000569891 USPL1Q5W0Q7 1092 aa7.15□□□□□ -1.27
CYLD-216ENST00000569891 CCDC85AQ96PX6 553 aaPredicted RBP7.15□□□□□ -1.27
CYLD-216ENST00000569891 CNNM2Q9H8M5 875 aa7.15□□□□□ -1.27
CYLD-216ENST00000569891 LRP2BPQ9P2M1 347 aa7.15□□□□□ -1.27
CYLD-216ENST00000569891 SNX14Q9Y5W7 946 aa7.15□□□□□ -1.27
CYLD-216ENST00000569891 HMGN5P82970 282 aaKnown RBP7.15□□□□□ -1.27
CYLD-216ENST00000569891 KCNB2Q92953 911 aa7.15□□□□□ -1.27
CYLD-216ENST00000569891 LEMD3Q9Y2U8 911 aa7.15□□□□□ -1.27
CYLD-216ENST00000569891 ERICH2A1L162 156 aa7.14□□□□□ -1.27
CYLD-216ENST00000569891 IDH1O75874 414 aaKnown RBP7.14□□□□□ -1.27
CYLD-216ENST00000569891 SPRYD3Q8NCJ5 442 aa7.14□□□□□ -1.27
CYLD-216ENST00000569891 TMX3Q96JJ7 454 aa7.14□□□□□ -1.27
CYLD-216ENST00000569891 MED23Q9ULK4 1368 aa7.14□□□□□ -1.27
CYLD-216ENST00000569891 PHF14O94880 888 aa7.14□□□□□ -1.27
CYLD-216ENST00000569891 MBD3O95983 291 aa7.14□□□□□ -1.27
CYLD-216ENST00000569891 APPP05067 770 aa7.14□□□□□ -1.27
CYLD-216ENST00000569891 RIC1Q4ADV7 1423 aa7.14□□□□□ -1.27
CYLD-216ENST00000569891 ZNF804AQ7Z570 1209 aa7.14□□□□□ -1.27
CYLD-216ENST00000569891 ZSWIM6Q9HCJ5 1215 aa7.14□□□□□ -1.27
CYLD-216ENST00000569891 PDS5AQ29RF7 1337 aaKnown RBP7.14□□□□□ -1.27
CYLD-216ENST00000569891 UBN2Q6ZU65 1347 aa7.14□□□□□ -1.27
CYLD-216ENST00000569891 COL11A2P13942 1736 aaPredicted RBP7.14□□□□□ -1.27
CYLD-216ENST00000569891 NUP98P52948 1817 aa7.14□□□□□ -1.27
CYLD-216ENST00000569891 ZNF213O14771 459 aa7.14□□□□□ -1.27
CYLD-216ENST00000569891 CDKL5O76039 1030 aa7.14□□□□□ -1.27
CYLD-216ENST00000569891 FAM184AQ8NB25 1140 aa7.14□□□□□ -1.27
CYLD-216ENST00000569891 MYH3P11055 1940 aa7.14□□□□□ -1.27
CYLD-216ENST00000569891 SLC27A2O14975 620 aa7.13□□□□□ -1.27
CYLD-216ENST00000569891 TAF5LO75529 589 aa7.13□□□□□ -1.27
CYLD-216ENST00000569891 PCP11498 1178 aaKnown RBP7.13□□□□□ -1.27
CYLD-216ENST00000569891 MCM4P33991 863 aa7.13□□□□□ -1.27
CYLD-216ENST00000569891 RAB3GAP1Q15042 981 aa7.13□□□□□ -1.27
CYLD-216ENST00000569891 CCDC102BQ68D86 513 aa7.13□□□□□ -1.27
CYLD-216ENST00000569891 SPATA5Q8NB90 893 aa7.13□□□□□ -1.27
CYLD-216ENST00000569891 NCOA7Q8NI08 942 aa7.13□□□□□ -1.27
CYLD-216ENST00000569891 TLR7Q9NYK1 1049 aaKnown RBP7.13□□□□□ -1.27
CYLD-216ENST00000569891 PLSCR1O15162 318 aa7.13□□□□□ -1.27
CYLD-216ENST00000569891 ZBTB22O15209 634 aa7.13□□□□□ -1.27
CYLD-216ENST00000569891 BBOX1O75936 387 aa7.13□□□□□ -1.27
CYLD-216ENST00000569891 CUL4AQ13619 759 aa7.13□□□□□ -1.27
CYLD-216ENST00000569891 NECTIN1Q15223 517 aa7.13□□□□□ -1.27
CYLD-216ENST00000569891 PUS3Q9BZE2 481 aaKnown RBP7.13□□□□□ -1.27
CYLD-216ENST00000569891 ZNF287Q9HBT7 754 aa7.13□□□□□ -1.27
CYLD-216ENST00000569891 WDR19Q8NEZ3 1342 aa7.13□□□□□ -1.27
CYLD-216ENST00000569891 G3V3G9 751 aa7.13□□□□□ -1.27
CYLD-216ENST00000569891 CHRNDQ07001 517 aa7.13□□□□□ -1.27
CYLD-216ENST00000569891 SLC9C2Q5TAH2 1124 aa7.13□□□□□ -1.27
CYLD-216ENST00000569891 DCAF8Q5TAQ9 597 aa7.13□□□□□ -1.27
CYLD-216ENST00000569891 KLHL34Q8N239 644 aa7.13□□□□□ -1.27
CYLD-216ENST00000569891 RPS6KB1P23443 525 aa7.13□□□□□ -1.27
CYLD-216ENST00000569891 DHX32Q7L7V1 743 aaKnown RBP7.13□□□□□ -1.27
CYLD-216ENST00000569891 TMTC2Q8N394 836 aa7.13□□□□□ -1.27
CYLD-216ENST00000569891 WDR66Q8TBY9 1149 aa7.13□□□□□ -1.27
CYLD-216ENST00000569891 ARHGEF1Q92888 912 aaKnown RBP7.13□□□□□ -1.27
CYLD-216ENST00000569891 FAM227BQ96M60 508 aa7.13□□□□□ -1.27
CYLD-216ENST00000569891 KIF2CQ99661 725 aa7.13□□□□□ -1.27
CYLD-216ENST00000569891 LLPHQ9BRT6 129 aaKnown RBP7.13□□□□□ -1.27
CYLD-216ENST00000569891 KRT23Q9C075 422 aa7.13□□□□□ -1.27
CYLD-216ENST00000569891 NAPBQ9H115 298 aa7.13□□□□□ -1.27
CYLD-216ENST00000569891 A0A0D9SFI3 127 aa7.12□□□□□ -1.27
CYLD-216ENST00000569891 ATP2B4P23634 1241 aa7.12□□□□□ -1.27
CYLD-216ENST00000569891 ALDH1B1P30837 517 aa7.12□□□□□ -1.27
CYLD-216ENST00000569891 MCM5P33992 734 aa7.12□□□□□ -1.27
CYLD-216ENST00000569891 ERFEQ4G0M1 354 aa7.12□□□□□ -1.27
CYLD-216ENST00000569891 CCDC178Q5BJE1 867 aa7.12□□□□□ -1.27
CYLD-216ENST00000569891 MTA3Q9BTC8 594 aa7.12□□□□□ -1.27
CYLD-216ENST00000569891 TFCP2L1Q9NZI6 479 aa7.12□□□□□ -1.27
CYLD-216ENST00000569891 PARP3Q9Y6F1 533 aa7.12□□□□□ -1.27
CYLD-216ENST00000569891 PDE6BP35913 854 aa7.12□□□□□ -1.27
CYLD-216ENST00000569891 GRIPAP1Q4V328 841 aa7.12□□□□□ -1.27
CYLD-216ENST00000569891 RAI14Q9P0K7 980 aa7.12□□□□□ -1.27
CYLD-216ENST00000569891 ANKIB1Q9P2G1 1089 aa7.12□□□□□ -1.27
CYLD-216ENST00000569891 ZMYM6O95789 1325 aa7.12□□□□□ -1.27
CYLD-216ENST00000569891 NBPF19A0A087WUL8 3843 aa7.12□□□□□ -1.27
CYLD-216ENST00000569891 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.12□□□□□ -1.27
CYLD-216ENST00000569891 PLCG2P16885 1265 aa7.12□□□□□ -1.27
CYLD-216ENST00000569891 GRAPQ13588 217 aa7.12□□□□□ -1.27
CYLD-216ENST00000569891 GRAPLQ8TC17 118 aaPredicted RBP7.12□□□□□ -1.27
CYLD-216ENST00000569891 UPF3BQ9BZI7 483 aaKnown RBP7.12□□□□□ -1.27
CYLD-216ENST00000569891 ANTXR1Q9H6X2 564 aa7.12□□□□□ -1.27
CYLD-216ENST00000569891 XDHP47989 1333 aa7.12□□□□□ -1.27
CYLD-216ENST00000569891 BAG3O95817 575 aa7.12□□□□□ -1.27
CYLD-216ENST00000569891 HIBADHP31937 336 aaKnown RBP7.12□□□□□ -1.27
CYLD-216ENST00000569891 ADD2P35612 726 aa7.12□□□□□ -1.27
CYLD-216ENST00000569891 ZAP70P43403 619 aa7.12□□□□□ -1.27
CYLD-216ENST00000569891 STK32BQ9NY57 414 aa7.12□□□□□ -1.27
CYLD-216ENST00000569891 H3BQV1 296 aa7.11□□□□□ -1.27
CYLD-216ENST00000569891 CPLX1O14810 134 aa7.11□□□□□ -1.27
CYLD-216ENST00000569891 FGFR2P21802 821 aa7.11□□□□□ -1.27
CYLD-216ENST00000569891 ALX1Q15699 326 aa7.11□□□□□ -1.27
CYLD-216ENST00000569891 IFFO2Q5TF58 517 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms