RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 TMED8Q6PL24 325 aaPredicted RBP28.6■■■□□ 2.17
RAB40C-212ENST00000569575 DBNDD1Q9H9R9 158 aa28.6■■■□□ 2.17
RAB40C-212ENST00000569575 SUGT1Q9Y2Z0 365 aa28.6■■■□□ 2.17
RAB40C-212ENST00000569575 USP17L3A6NCW0 530 aa28.59■■■□□ 2.17
RAB40C-212ENST00000569575 USP17L4A6NCW7 530 aa28.59■■■□□ 2.17
RAB40C-212ENST00000569575 USP17L1Q7RTZ2 530 aa28.59■■■□□ 2.17
RAB40C-212ENST00000569575 SPATA5Q8NB90 893 aa28.59■■■□□ 2.17
RAB40C-212ENST00000569575 MYO3BQ8WXR4 1341 aa28.59■■■□□ 2.17
RAB40C-212ENST00000569575 SALL1Q9NSC2 1324 aa28.59■■■□□ 2.17
RAB40C-212ENST00000569575 RASGRF1Q13972 1273 aa28.58■■■□□ 2.17
RAB40C-212ENST00000569575 TTF1Q15361 905 aaPredicted RBP28.58■■■□□ 2.17
RAB40C-212ENST00000569575 HAUS7Q99871 368 aa28.58■■■□□ 2.17
RAB40C-212ENST00000569575 BCL11AQ9H165 835 aa28.58■■■□□ 2.17
RAB40C-212ENST00000569575 RNF181Q9P0P0 153 aa28.58■■■□□ 2.17
RAB40C-212ENST00000569575 MYH13Q9UKX3 1938 aa28.57■■■□□ 2.16
RAB40C-212ENST00000569575 PDE4AP27815 886 aa28.57■■■□□ 2.16
RAB40C-212ENST00000569575 PRELPP51888 382 aa28.57■■■□□ 2.16
RAB40C-212ENST00000569575 C9orf131Q5VYM1 1079 aa28.57■■■□□ 2.16
RAB40C-212ENST00000569575 TTLL5Q6EMB2 1281 aa28.57■■■□□ 2.16
RAB40C-212ENST00000569575 PI4K2BQ8TCG2 481 aa28.57■■■□□ 2.16
RAB40C-212ENST00000569575 HMG20BQ9P0W2 317 aa28.57■■■□□ 2.16
RAB40C-212ENST00000569575 SRCAPQ6ZRS2 3230 aa28.57■■■□□ 2.16
RAB40C-212ENST00000569575 PSME4Q14997 1843 aa28.57■■■□□ 2.16
RAB40C-212ENST00000569575 MCAMP43121 646 aa28.56■■■□□ 2.16
RAB40C-212ENST00000569575 SPTY2D1Q68D10 685 aaPredicted RBP28.56■■■□□ 2.16
RAB40C-212ENST00000569575 OTUD7AQ8TE49 926 aaPredicted RBP28.56■■■□□ 2.16
RAB40C-212ENST00000569575 CIAPIN1Q6FI81 312 aa28.55■■■□□ 2.16
RAB40C-212ENST00000569575 AKAP11Q9UKA4 1901 aa28.55■■■□□ 2.16
RAB40C-212ENST00000569575 YDJCA8MPS7 323 aa28.54■■■□□ 2.16
RAB40C-212ENST00000569575 VIL1P09327 827 aaKnown RBP28.54■■■□□ 2.16
RAB40C-212ENST00000569575 RPS12P25398 132 aaKnown RBP28.53■■■□□ 2.16
RAB40C-212ENST00000569575 GTF2IP78347 998 aa28.53■■■□□ 2.16
RAB40C-212ENST00000569575 LRRFIP1Q32MZ4 808 aaKnown RBP28.53■■■□□ 2.16
RAB40C-212ENST00000569575 DPY19L2Q6NUT2 758 aa28.53■■■□□ 2.16
RAB40C-212ENST00000569575 COL4A5P29400 1685 aa28.52■■■□□ 2.16
RAB40C-212ENST00000569575 CXCL9Q07325 125 aa28.52■■■□□ 2.16
RAB40C-212ENST00000569575 AGBL3Q8NEM8 1001 aa28.52■■■□□ 2.16
RAB40C-212ENST00000569575 BOLA2Q9H3K6 86 aa28.52■■■□□ 2.16
RAB40C-212ENST00000569575 DACT2Q5SW24 774 aa28.51■■■□□ 2.15
RAB40C-212ENST00000569575 GPC2Q8N158 579 aa28.51■■■□□ 2.15
RAB40C-212ENST00000569575 IQSEC3Q9UPP2 1182 aaPredicted RBP28.51■■■□□ 2.15
RAB40C-212ENST00000569575 SCARF1Q14162 830 aa28.5■■■□□ 2.15
RAB40C-212ENST00000569575 PAG1Q9NWQ8 432 aa28.5■■■□□ 2.15
RAB40C-212ENST00000569575 SCN9AQ15858 1988 aa28.5■■■□□ 2.15
RAB40C-212ENST00000569575 MAST3O60307 1309 aa28.49■■■□□ 2.15
RAB40C-212ENST00000569575 ZAP70P43403 619 aa28.49■■■□□ 2.15
RAB40C-212ENST00000569575 MFSD14BQ5SR56 506 aa28.49■■■□□ 2.15
RAB40C-212ENST00000569575 RSBN1LQ6PCB5 846 aaPredicted RBP28.49■■■□□ 2.15
RAB40C-212ENST00000569575 EVI5LQ96CN4 794 aa28.49■■■□□ 2.15
RAB40C-212ENST00000569575 MRIQ9BWK5 157 aa28.49■■■□□ 2.15
RAB40C-212ENST00000569575 CYP2E1P05181 493 aaPredicted RBP28.48■■■□□ 2.15
RAB40C-212ENST00000569575 CHAF1AQ13111 956 aaPredicted RBP28.48■■■□□ 2.15
RAB40C-212ENST00000569575 TTC22Q5TAA0 569 aa28.48■■■□□ 2.15
RAB40C-212ENST00000569575 CNTROBQ8N137 903 aa28.48■■■□□ 2.15
RAB40C-212ENST00000569575 DPF2Q92785 391 aa28.48■■■□□ 2.15
RAB40C-212ENST00000569575 TIAM2Q8IVF5 1701 aa28.48■■■□□ 2.15
RAB40C-212ENST00000569575 PSMD14O00487 310 aa28.47■■■□□ 2.15
RAB40C-212ENST00000569575 RAD17O75943 681 aa28.47■■■□□ 2.15
RAB40C-212ENST00000569575 ZSCAN25Q6NSZ9 544 aa28.47■■■□□ 2.15
RAB40C-212ENST00000569575 DNAJC2Q99543 621 aaKnown RBP28.47■■■□□ 2.15
RAB40C-212ENST00000569575 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.47■■■□□ 2.15
RAB40C-212ENST00000569575 HDLBPQ00341 1268 aaKnown RBP28.46■■■□□ 2.15
RAB40C-212ENST00000569575 MAP3K12Q12852 859 aa28.46■■■□□ 2.15
RAB40C-212ENST00000569575 BMP2KLQ5H9B9 411 aa28.46■■■□□ 2.15
RAB40C-212ENST00000569575 ERICH6Q7L0X2 663 aa28.46■■■□□ 2.15
RAB40C-212ENST00000569575 SLF2Q8IX21 1173 aa28.46■■■□□ 2.15
RAB40C-212ENST00000569575 SNRKQ9NRH2 765 aa28.46■■■□□ 2.15
RAB40C-212ENST00000569575 COL1A1P02452 1464 aaPredicted RBP28.46■■■□□ 2.15
RAB40C-212ENST00000569575 LDHBP07195 334 aaKnown RBP28.45■■■□□ 2.14
RAB40C-212ENST00000569575 KBTBD3Q8NAB2 608 aa28.45■■■□□ 2.14
RAB40C-212ENST00000569575 KCNQ5Q9NR82 932 aa28.45■■■□□ 2.14
RAB40C-212ENST00000569575 LRP2BPQ9P2M1 347 aa28.45■■■□□ 2.14
RAB40C-212ENST00000569575 GOLIM4O00461 696 aa28.44■■■□□ 2.14
RAB40C-212ENST00000569575 RGS3P49796 1198 aa28.44■■■□□ 2.14
RAB40C-212ENST00000569575 TSHZ3Q63HK5 1081 aa28.44■■■□□ 2.14
RAB40C-212ENST00000569575 FBXW7Q969H0 707 aa28.44■■■□□ 2.14
RAB40C-212ENST00000569575 GMLQ99445 158 aa28.44■■■□□ 2.14
RAB40C-212ENST00000569575 ABCF2Q9UG63 623 aa28.44■■■□□ 2.14
RAB40C-212ENST00000569575 RFX7Q2KHR2 1363 aa28.43■■■□□ 2.14
RAB40C-212ENST00000569575 ZFYP08048 801 aaPredicted RBP28.43■■■□□ 2.14
RAB40C-212ENST00000569575 GSTO1P78417 241 aa28.43■■■□□ 2.14
RAB40C-212ENST00000569575 PI16Q6UXB8 463 aa28.43■■■□□ 2.14
RAB40C-212ENST00000569575 OGFOD1Q8N543 542 aa28.43■■■□□ 2.14
RAB40C-212ENST00000569575 HDAC9Q9UKV0 1011 aa28.43■■■□□ 2.14
RAB40C-212ENST00000569575 ZNF646O15015 1829 aaPredicted RBP28.42■■■□□ 2.14
RAB40C-212ENST00000569575 GLTPD2A6NH11 291 aa28.42■■■□□ 2.14
RAB40C-212ENST00000569575 LDHCP07864 332 aa28.42■■■□□ 2.14
RAB40C-212ENST00000569575 TRIM6-TRIM34B2RNG4 842 aa28.41■■■□□ 2.14
RAB40C-212ENST00000569575 HIP1O00291 1037 aa28.41■■■□□ 2.14
RAB40C-212ENST00000569575 ZNF541Q9H0D2 1346 aa28.41■■■□□ 2.14
RAB40C-212ENST00000569575 GOLGB1Q14789 3259 aaKnown RBP28.4■■■□□ 2.14
RAB40C-212ENST00000569575 CERS3Q8IU89 383 aa28.4■■■□□ 2.14
RAB40C-212ENST00000569575 CERS5Q8N5B7 392 aa28.4■■■□□ 2.14
RAB40C-212ENST00000569575 FAM163AQ96GL9 167 aaPredicted RBP28.4■■■□□ 2.14
RAB40C-212ENST00000569575 L3MBTL3Q96JM7 780 aaPredicted RBP28.4■■■□□ 2.14
RAB40C-212ENST00000569575 DOCK2Q92608 1830 aa28.4■■■□□ 2.14
RAB40C-212ENST00000569575 USP17L8P0C7I0 530 aa28.39■■■□□ 2.14
RAB40C-212ENST00000569575 HHIPL2Q6UWX4 724 aa28.39■■■□□ 2.14
RAB40C-212ENST00000569575 PIH1D3Q9NQM4 214 aaKnown RBP28.39■■■□□ 2.14
RAB40C-212ENST00000569575 RAI14Q9P0K7 980 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms