RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 SLC6A14Q9UN76 642 aa8.85□□□□□ -0.99
UBR1-208ENST00000569066 GARTP22102 1010 aa8.85□□□□□ -0.99
UBR1-208ENST00000569066 SV2BQ7L1I2 683 aa8.85□□□□□ -0.99
UBR1-208ENST00000569066 GOLM1Q8NBJ4 401 aa8.85□□□□□ -0.99
UBR1-208ENST00000569066 MX2P20592 715 aa8.84□□□□□ -0.99
UBR1-208ENST00000569066 PCNX4Q63HM2 1172 aa8.84□□□□□ -0.99
UBR1-208ENST00000569066 SV2AQ7L0J3 742 aa8.84□□□□□ -0.99
UBR1-208ENST00000569066 FCHSD1Q86WN1 690 aa8.84□□□□□ -0.99
UBR1-208ENST00000569066 FAM177A1Q8N128 213 aaPredicted RBP8.84□□□□□ -0.99
UBR1-208ENST00000569066 GPR161Q8N6U8 529 aaKnown RBP8.84□□□□□ -0.99
UBR1-208ENST00000569066 STK35Q8TDR2 534 aa8.84□□□□□ -0.99
UBR1-208ENST00000569066 SMG9Q9H0W8 520 aaKnown RBP8.84□□□□□ -0.99
UBR1-208ENST00000569066 SIN3BO75182 1162 aa8.84□□□□□ -0.99
UBR1-208ENST00000569066 GIMAP6Q6P9H5 292 aa8.84□□□□□ -0.99
UBR1-208ENST00000569066 FOXR1Q6PIV2 292 aa8.84□□□□□ -0.99
UBR1-208ENST00000569066 VN1R5Q7Z5H4 357 aa8.84□□□□□ -0.99
UBR1-208ENST00000569066 RASGRP4Q8TDF6 673 aa8.84□□□□□ -0.99
UBR1-208ENST00000569066 LPIN3Q9BQK8 851 aa8.84□□□□□ -0.99
UBR1-208ENST00000569066 EFR3BQ9Y2G0 817 aa8.84□□□□□ -0.99
UBR1-208ENST00000569066 PCDHB5Q9Y5E4 795 aa8.84□□□□□ -0.99
UBR1-208ENST00000569066 CDC25BP30305 580 aa8.83□□□□□ -1
UBR1-208ENST00000569066 ADH7P40394 386 aa8.83□□□□□ -1
UBR1-208ENST00000569066 CAMK2GQ13555 558 aaPredicted RBP8.83□□□□□ -1
UBR1-208ENST00000569066 ZNF423Q2M1K9 1284 aa8.83□□□□□ -1
UBR1-208ENST00000569066 Q6ZNB5 142 aa8.83□□□□□ -1
UBR1-208ENST00000569066 SH2B1Q9NRF2 756 aaPredicted RBP8.83□□□□□ -1
UBR1-208ENST00000569066 GINM1Q9NU53 330 aa8.83□□□□□ -1
UBR1-208ENST00000569066 MRVI1Q9Y6F6 885 aa8.83□□□□□ -1
UBR1-208ENST00000569066 NEURL1BA8MQ27 555 aa8.83□□□□□ -1
UBR1-208ENST00000569066 NASPP49321 788 aaPredicted RBP8.83□□□□□ -1
UBR1-208ENST00000569066 BNC2Q6ZN30 1099 aaPredicted RBP8.83□□□□□ -1
UBR1-208ENST00000569066 FBXO27Q8NI29 283 aa8.83□□□□□ -1
UBR1-208ENST00000569066 TNFRSF25Q93038 417 aa8.83□□□□□ -1
UBR1-208ENST00000569066 PWP1Q13610 501 aa8.82□□□□□ -1
UBR1-208ENST00000569066 NANOS1Q8WY41 292 aaKnown RBP8.82□□□□□ -1
UBR1-208ENST00000569066 BSNDQ8WZ55 320 aa8.82□□□□□ -1
UBR1-208ENST00000569066 CEP44Q9C0F1 390 aa8.82□□□□□ -1
UBR1-208ENST00000569066 CLEC4MQ9H2X3 399 aaPredicted RBP8.82□□□□□ -1
UBR1-208ENST00000569066 SMNDC1O75940 238 aaKnown RBP eCLIP8.82□□□□□ -1
UBR1-208ENST00000569066 GDF6Q6KF10 455 aaPredicted RBP8.82□□□□□ -1
UBR1-208ENST00000569066 MPRIPQ6WCQ1 1025 aa8.82□□□□□ -1
UBR1-208ENST00000569066 AGMOQ6ZNB7 445 aa8.82□□□□□ -1
UBR1-208ENST00000569066 TLR3O15455 904 aaKnown RBP8.81□□□□□ -1
UBR1-208ENST00000569066 EPHA1P21709 976 aa8.81□□□□□ -1
UBR1-208ENST00000569066 SEPT6Q14141 434 aa8.81□□□□□ -1
UBR1-208ENST00000569066 CCDC144BQ3MJ40 725 aa8.81□□□□□ -1
UBR1-208ENST00000569066 SNAP47Q5SQN1 464 aa8.81□□□□□ -1
UBR1-208ENST00000569066 HGSNATQ68CP4 663 aa8.81□□□□□ -1
UBR1-208ENST00000569066 VPS37DQ86XT2 251 aa8.81□□□□□ -1
UBR1-208ENST00000569066 GRIN3AQ8TCU5 1115 aa8.81□□□□□ -1
UBR1-208ENST00000569066 NUDT8Q8WV74 236 aa8.81□□□□□ -1
UBR1-208ENST00000569066 MDFIQ99750 246 aa8.81□□□□□ -1
UBR1-208ENST00000569066 SOX13Q9UN79 622 aa8.81□□□□□ -1
UBR1-208ENST00000569066 PCDH1Q08174 1060 aa8.8□□□□□ -1
UBR1-208ENST00000569066 RNFT1Q5M7Z0 435 aa8.8□□□□□ -1
UBR1-208ENST00000569066 TXNDC11Q6PKC3 985 aa8.8□□□□□ -1
UBR1-208ENST00000569066 RBSNQ9H1K0 784 aa8.8□□□□□ -1
UBR1-208ENST00000569066 PIF1Q9H611 641 aa8.8□□□□□ -1
UBR1-208ENST00000569066 ZNF408Q9H9D4 720 aa8.8□□□□□ -1
UBR1-208ENST00000569066 KCNQ5Q9NR82 932 aa8.8□□□□□ -1
UBR1-208ENST00000569066 TMEM39AQ9NV64 488 aa8.8□□□□□ -1
UBR1-208ENST00000569066 GREM1O60565 184 aa8.8□□□□□ -1
UBR1-208ENST00000569066 PSAPL1Q6NUJ1 521 aa8.8□□□□□ -1
UBR1-208ENST00000569066 ELMSAN1Q6PJG2 1045 aa8.8□□□□□ -1
UBR1-208ENST00000569066 CCDC81Q6ZN84 652 aa8.8□□□□□ -1
UBR1-208ENST00000569066 SUPT16HQ9Y5B9 1047 aaKnown RBP8.8□□□□□ -1
UBR1-208ENST00000569066 F13A1P00488 732 aa8.79□□□□□ -1
UBR1-208ENST00000569066 ADH6P28332 368 aa8.79□□□□□ -1
UBR1-208ENST00000569066 MICALL1Q8N3F8 863 aa8.79□□□□□ -1
UBR1-208ENST00000569066 GGA1Q9UJY5 639 aa8.79□□□□□ -1
UBR1-208ENST00000569066 B3GALT4O96024 378 aa8.79□□□□□ -1
UBR1-208ENST00000569066 APOBRQ0VD83 1088 aa8.79□□□□□ -1
UBR1-208ENST00000569066 JARID2Q92833 1246 aaPredicted RBP8.79□□□□□ -1
UBR1-208ENST00000569066 PPT2Q9UMR5 302 aa8.79□□□□□ -1
UBR1-208ENST00000569066 BMP6P22004 513 aa8.78□□□□□ -1
UBR1-208ENST00000569066 ETFBP38117 255 aa8.78□□□□□ -1
UBR1-208ENST00000569066 LMNB2Q03252 620 aa8.78□□□□□ -1
UBR1-208ENST00000569066 RBL2Q08999 1139 aa8.78□□□□□ -1
UBR1-208ENST00000569066 KANK3Q6NY19 840 aa8.78□□□□□ -1
UBR1-208ENST00000569066 TRIM42Q8IWZ5 723 aa8.78□□□□□ -1
UBR1-208ENST00000569066 STK10O94804 968 aaKnown RBP8.78□□□□□ -1
UBR1-208ENST00000569066 PTPN11Q06124 597 aaPredicted RBP8.78□□□□□ -1
UBR1-208ENST00000569066 NT5C1AQ9BXI3 368 aa8.78□□□□□ -1
UBR1-208ENST00000569066 SSBP05455 408 aaKnown RBP eCLIP8.77□□□□□ -1.01
UBR1-208ENST00000569066 ESRRAP11474 423 aaPredicted RBP8.77□□□□□ -1.01
UBR1-208ENST00000569066 RLBP1P12271 317 aa8.77□□□□□ -1.01
UBR1-208ENST00000569066 PCSK7Q16549 785 aa8.77□□□□□ -1.01
UBR1-208ENST00000569066 SEZ6Q53EL9 994 aa8.77□□□□□ -1.01
UBR1-208ENST00000569066 ARAFP10398 606 aa8.77□□□□□ -1.01
UBR1-208ENST00000569066 PTPRAP18433 802 aa8.77□□□□□ -1.01
UBR1-208ENST00000569066 RPS26P11Q5JNZ5 115 aaPredicted RBP8.77□□□□□ -1.01
UBR1-208ENST00000569066 FAM196AQ6ZSG2 479 aa8.77□□□□□ -1.01
UBR1-208ENST00000569066 SULF2Q8IWU5 870 aa8.77□□□□□ -1.01
UBR1-208ENST00000569066 ARMC5Q96C12 935 aa8.77□□□□□ -1.01
UBR1-208ENST00000569066 ADARB2-AS1A8MUL3 147 aa8.76□□□□□ -1.01
UBR1-208ENST00000569066 ECEL1O95672 775 aa8.76□□□□□ -1.01
UBR1-208ENST00000569066 SOX9P48436 509 aa8.76□□□□□ -1.01
UBR1-208ENST00000569066 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.76□□□□□ -1.01
UBR1-208ENST00000569066 C1orf229Q6ZS94 237 aaPredicted RBP8.76□□□□□ -1.01
UBR1-208ENST00000569066 C8orf86Q6ZUL3 223 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms